RNA–Protein interactions for RNA: ENST00000485680.1

SPTA1-207, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 422 nt, Biotype processed transcript, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-207ENST00000485680 HOXD10P28358 340 aa4.54□□□□□ -1.68
SPTA1-207ENST00000485680 C21orf33P30042 268 aaPredicted RBP4.54□□□□□ -1.68
SPTA1-207ENST00000485680 SERPINB6P35237 376 aa4.54□□□□□ -1.68
SPTA1-207ENST00000485680 ELK3P41970 407 aa4.54□□□□□ -1.68
SPTA1-207ENST00000485680 SLC15A1P46059 708 aa4.54□□□□□ -1.68
SPTA1-207ENST00000485680 AMTP48728 403 aa4.54□□□□□ -1.68
SPTA1-207ENST00000485680 GLUD2P49448 558 aa4.54□□□□□ -1.68
SPTA1-207ENST00000485680 SULT1E1P49888 294 aa4.54□□□□□ -1.68
SPTA1-207ENST00000485680 MFAP4P55083 255 aa4.54□□□□□ -1.68
SPTA1-207ENST00000485680 YWHAGP61981 247 aaKnown RBP eCLIP4.54□□□□□ -1.68
SPTA1-207ENST00000485680 COG7P83436 770 aa4.54□□□□□ -1.68
SPTA1-207ENST00000485680 ZNF33AQ06730 810 aa4.54□□□□□ -1.68
SPTA1-207ENST00000485680 KCNJ11Q14654 390 aa4.54□□□□□ -1.68
SPTA1-207ENST00000485680 TWIST1Q15672 202 aa4.54□□□□□ -1.68
SPTA1-207ENST00000485680 PDK4Q16654 411 aa4.54□□□□□ -1.68
SPTA1-207ENST00000485680 PARP6Q2NL67 630 aa4.54□□□□□ -1.68
SPTA1-207ENST00000485680 PPP6R3Q5H9R7 873 aaPredicted RBP4.54□□□□□ -1.68
SPTA1-207ENST00000485680 GLRA4Q5JXX5 417 aa4.54□□□□□ -1.68
SPTA1-207ENST00000485680 GGNBP1Q5YKI7 109 aa4.54□□□□□ -1.68
SPTA1-207ENST00000485680 SIGIRRQ6IA17 410 aa4.54□□□□□ -1.68
SPTA1-207ENST00000485680 METTL2BQ6P1Q9 378 aaKnown RBP4.54□□□□□ -1.68
SPTA1-207ENST00000485680 SLC36A4Q6YBV0 504 aa4.54□□□□□ -1.68
SPTA1-207ENST00000485680 PIGZQ86VD9 579 aa4.54□□□□□ -1.68
SPTA1-207ENST00000485680 FAM228AQ86W67 206 aa4.54□□□□□ -1.68
SPTA1-207ENST00000485680 LRRC6Q86X45 466 aa4.54□□□□□ -1.68
SPTA1-207ENST00000485680 LINC00346Q8IVM7 164 aa4.54□□□□□ -1.68
SPTA1-207ENST00000485680 RNF168Q8IYW5 571 aaPredicted RBP4.54□□□□□ -1.68
SPTA1-207ENST00000485680 DEFB106AQ8N104 65 aa4.54□□□□□ -1.68
SPTA1-207ENST00000485680 OR8H2Q8N162 312 aa4.54□□□□□ -1.68
SPTA1-207ENST00000485680 THEM5Q8N1Q8 247 aa4.54□□□□□ -1.68
SPTA1-207ENST00000485680 SCML4Q8N228 414 aa4.54□□□□□ -1.68
SPTA1-207ENST00000485680 PQLC3Q8N755 202 aa4.54□□□□□ -1.68
SPTA1-207ENST00000485680 OR8K5Q8NH50 307 aa4.54□□□□□ -1.68
SPTA1-207ENST00000485680 SLC44A1Q8WWI5 657 aa4.54□□□□□ -1.68
SPTA1-207ENST00000485680 HTR3CQ8WXA8 447 aa4.54□□□□□ -1.68
SPTA1-207ENST00000485680 NTAN1Q96AB6 310 aa4.54□□□□□ -1.68
SPTA1-207ENST00000485680 SAT2Q96F10 170 aaPredicted RBP4.54□□□□□ -1.68
SPTA1-207ENST00000485680 PGAP3Q96FM1 320 aaPredicted RBP4.54□□□□□ -1.68
SPTA1-207ENST00000485680 SMARCD1Q96GM5 515 aa4.54□□□□□ -1.68
SPTA1-207ENST00000485680 GRAMD2BQ96HH9 432 aa4.54□□□□□ -1.68
SPTA1-207ENST00000485680 METTL2AQ96IZ6 378 aaKnown RBP4.54□□□□□ -1.68
SPTA1-207ENST00000485680 EGLN2Q96KS0 407 aa4.54□□□□□ -1.68
SPTA1-207ENST00000485680 SENP8Q96LD8 212 aa4.54□□□□□ -1.68
SPTA1-207ENST00000485680 SPATA13Q96N96 652 aa4.54□□□□□ -1.68
SPTA1-207ENST00000485680 LRFN5Q96NI6 719 aa4.54□□□□□ -1.68
SPTA1-207ENST00000485680 QKIQ96PU8 341 aaKnown RBP eCLIP4.54□□□□□ -1.68
SPTA1-207ENST00000485680 CSPG4P5Q96PW8 444 aa4.54□□□□□ -1.68
SPTA1-207ENST00000485680 RAB3IPQ96QF0 476 aaPredicted RBP4.54□□□□□ -1.68
SPTA1-207ENST00000485680 PEBP4Q96S96 227 aa4.54□□□□□ -1.68
SPTA1-207ENST00000485680 PAFAH2Q99487 392 aa4.54□□□□□ -1.68
SPTA1-207ENST00000485680 VAT1Q99536 393 aa4.54□□□□□ -1.68
SPTA1-207ENST00000485680 SYT15Q9BQS2 421 aa4.54□□□□□ -1.68
SPTA1-207ENST00000485680 ACBD6Q9BR61 282 aa4.54□□□□□ -1.68
SPTA1-207ENST00000485680 SEZ6LQ9BYH1 1024 aa4.54□□□□□ -1.68
SPTA1-207ENST00000485680 SPRY4Q9C004 299 aa4.54□□□□□ -1.68
SPTA1-207ENST00000485680 UPF3AQ9H1J1 476 aaKnown RBP4.54□□□□□ -1.68
SPTA1-207ENST00000485680 PDE7BQ9NP56 450 aa4.54□□□□□ -1.68
SPTA1-207ENST00000485680 ACSS1Q9NUB1 689 aaPredicted RBP4.54□□□□□ -1.68
SPTA1-207ENST00000485680 TXLNGQ9NUQ3 528 aa4.54□□□□□ -1.68
SPTA1-207ENST00000485680 DDX43Q9NXZ2 648 aaKnown RBP4.54□□□□□ -1.68
SPTA1-207ENST00000485680 EURLQ9NYK6 297 aa4.54□□□□□ -1.68
SPTA1-207ENST00000485680 COPG2Q9UBF2 871 aa4.54□□□□□ -1.68
SPTA1-207ENST00000485680 HES2Q9Y543 173 aa4.54□□□□□ -1.68
SPTA1-207ENST00000485680 USH1CQ9Y6N9 552 aa4.54□□□□□ -1.68
SPTA1-207ENST00000485680 PLXNA1Q9UIW2 1896 aa4.54□□□□□ -1.68
SPTA1-207ENST00000485680 MAGEB16A2A368 324 aa4.53□□□□□ -1.68
SPTA1-207ENST00000485680 SDR42E2A6NKP2 422 aa4.53□□□□□ -1.68
SPTA1-207ENST00000485680 EEF2KO00418 725 aaKnown RBP4.53□□□□□ -1.68
SPTA1-207ENST00000485680 COPEO14579 308 aa4.53□□□□□ -1.68
SPTA1-207ENST00000485680 CTDSP2O14595 271 aa4.53□□□□□ -1.68
SPTA1-207ENST00000485680 TYROBPO43914 113 aa4.53□□□□□ -1.68
SPTA1-207ENST00000485680 EGFP01133 1207 aa4.53□□□□□ -1.68
SPTA1-207ENST00000485680 APOEP02649 317 aa4.53□□□□□ -1.68
SPTA1-207ENST00000485680 APRTP07741 180 aa4.53□□□□□ -1.68
SPTA1-207ENST00000485680 TYMPP19971 482 aa4.53□□□□□ -1.68
SPTA1-207ENST00000485680 TAC1P20366 129 aa4.53□□□□□ -1.68
SPTA1-207ENST00000485680 IL4RP24394 825 aa4.53□□□□□ -1.68
SPTA1-207ENST00000485680 LMO2P25791 158 aa4.53□□□□□ -1.68
SPTA1-207ENST00000485680 ITGB8P26012 769 aa4.53□□□□□ -1.68
SPTA1-207ENST00000485680 ACADLP28330 430 aa4.53□□□□□ -1.68
SPTA1-207ENST00000485680 SSTR1P30872 391 aa4.53□□□□□ -1.68
SPTA1-207ENST00000485680 SSTR2P30874 369 aa4.53□□□□□ -1.68
SPTA1-207ENST00000485680 HOXD3P31249 432 aaPredicted RBP4.53□□□□□ -1.68
SPTA1-207ENST00000485680 NRIP1P48552 1158 aa4.53□□□□□ -1.68
SPTA1-207ENST00000485680 TKTL1P51854 596 aa4.53□□□□□ -1.68
SPTA1-207ENST00000485680 GPX6P59796 221 aa4.53□□□□□ -1.68
SPTA1-207ENST00000485680 BEX3Q00994 111 aa4.53□□□□□ -1.68
SPTA1-207ENST00000485680 TSPY1Q01534 308 aa4.53□□□□□ -1.68
SPTA1-207ENST00000485680 BNC1Q01954 994 aa4.53□□□□□ -1.68
SPTA1-207ENST00000485680 ADIGQ0VDE8 80 aa4.53□□□□□ -1.68
SPTA1-207ENST00000485680 Q0VFX4 171 aa4.53□□□□□ -1.68
SPTA1-207ENST00000485680 ILF2Q12905 390 aaKnown RBP4.53□□□□□ -1.68
SPTA1-207ENST00000485680 PRPSAP1Q14558 356 aa4.53□□□□□ -1.68
SPTA1-207ENST00000485680 PAFAH1B3Q15102 231 aaKnown RBP4.53□□□□□ -1.68
SPTA1-207ENST00000485680 PKN2Q16513 984 aaKnown RBP4.53□□□□□ -1.68
SPTA1-207ENST00000485680 PCGF3Q3KNV8 242 aa4.53□□□□□ -1.68
SPTA1-207ENST00000485680 ZNF260Q3ZCT1 412 aa4.53□□□□□ -1.68
SPTA1-207ENST00000485680 MDH1BQ5I0G3 518 aa4.53□□□□□ -1.68
SPTA1-207ENST00000485680 STXBP5Q5T5C0 1151 aa4.53□□□□□ -1.68
SPTA1-207ENST00000485680 ANKRD22Q5VYY1 191 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms