RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 NAALAD2Q9Y3Q0 740 aa7.85□□□□□ -1.15
SF3A1-208ENST00000485618 ASB1Q9Y576 335 aa7.85□□□□□ -1.15
SF3A1-208ENST00000485618 MDC1Q14676 2089 aaKnown RBP7.84□□□□□ -1.15
SF3A1-208ENST00000485618 COL27A1Q8IZC6 1860 aaPredicted RBP7.84□□□□□ -1.15
SF3A1-208ENST00000485618 LRRC14BA6NHZ5 514 aa7.84□□□□□ -1.15
SF3A1-208ENST00000485618 SLC28A1O00337 649 aa7.84□□□□□ -1.15
SF3A1-208ENST00000485618 DYNC1I1O14576 645 aa7.84□□□□□ -1.15
SF3A1-208ENST00000485618 AZIN1O14977 448 aa7.84□□□□□ -1.15
SF3A1-208ENST00000485618 RGS14O43566 566 aa7.84□□□□□ -1.15
SF3A1-208ENST00000485618 HCRTR1O43613 425 aa7.84□□□□□ -1.15
SF3A1-208ENST00000485618 GALR3O60755 368 aaPredicted RBP7.84□□□□□ -1.15
SF3A1-208ENST00000485618 CREG1O75629 220 aa7.84□□□□□ -1.15
SF3A1-208ENST00000485618 MYO1DO94832 1006 aa7.84□□□□□ -1.15
SF3A1-208ENST00000485618 SEMA3DO95025 777 aa7.84□□□□□ -1.15
SF3A1-208ENST00000485618 HSPA4LO95757 839 aa7.84□□□□□ -1.15
SF3A1-208ENST00000485618 TGFB1P01137 390 aa7.84□□□□□ -1.15
SF3A1-208ENST00000485618 SERPINE1P05121 402 aa7.84□□□□□ -1.15
SF3A1-208ENST00000485618 CAPN1P07384 714 aa7.84□□□□□ -1.15
SF3A1-208ENST00000485618 HEXBP07686 556 aa7.84□□□□□ -1.15
SF3A1-208ENST00000485618 FGF4P08620 206 aa7.84□□□□□ -1.15
SF3A1-208ENST00000485618 ZNF888P0CJ79 500 aaPredicted RBP7.84□□□□□ -1.15
SF3A1-208ENST00000485618 RNH1P13489 461 aaKnown RBP7.84□□□□□ -1.15
SF3A1-208ENST00000485618 LIFP15018 202 aa7.84□□□□□ -1.15
SF3A1-208ENST00000485618 DDX5P17844 614 aaKnown RBP7.84□□□□□ -1.15
SF3A1-208ENST00000485618 ETV4P43268 484 aa7.84□□□□□ -1.15
SF3A1-208ENST00000485618 SSR2P43308 183 aa7.84□□□□□ -1.15
SF3A1-208ENST00000485618 PLA2G16P53816 162 aa7.84□□□□□ -1.15
SF3A1-208ENST00000485618 EMP2P54851 167 aa7.84□□□□□ -1.15
SF3A1-208ENST00000485618 MTTPP55157 894 aa7.84□□□□□ -1.15
SF3A1-208ENST00000485618 RAB8AP61006 207 aa7.84□□□□□ -1.15
SF3A1-208ENST00000485618 CSTF3Q12996 717 aaKnown RBP7.84□□□□□ -1.15
SF3A1-208ENST00000485618 TRAF3Q13114 568 aa7.84□□□□□ -1.15
SF3A1-208ENST00000485618 STX3Q13277 289 aa7.84□□□□□ -1.15
SF3A1-208ENST00000485618 BIKQ13323 160 aa7.84□□□□□ -1.15
SF3A1-208ENST00000485618 SLC9A5Q14940 896 aa7.84□□□□□ -1.15
SF3A1-208ENST00000485618 PCLAFQ15004 111 aa7.84□□□□□ -1.15
SF3A1-208ENST00000485618 TGIF1Q15583 401 aa7.84□□□□□ -1.15
SF3A1-208ENST00000485618 DEFB134Q4QY38 66 aa7.84□□□□□ -1.15
SF3A1-208ENST00000485618 SGO1Q5FBB7 561 aa7.84□□□□□ -1.15
SF3A1-208ENST00000485618 PRAMEF17Q5VTA0 474 aa7.84□□□□□ -1.15
SF3A1-208ENST00000485618 OR4C11Q6IEV9 310 aa7.84□□□□□ -1.15
SF3A1-208ENST00000485618 CLYBLQ8N0X4 340 aa7.84□□□□□ -1.15
SF3A1-208ENST00000485618 ENDOVQ8N8Q3 282 aaKnown RBP7.84□□□□□ -1.15
SF3A1-208ENST00000485618 SLC38A9Q8NBW4 561 aa7.84□□□□□ -1.15
SF3A1-208ENST00000485618 OR9A4Q8NGU2 314 aa7.84□□□□□ -1.15
SF3A1-208ENST00000485618 OR51Q1Q8NH59 317 aa7.84□□□□□ -1.15
SF3A1-208ENST00000485618 ZCCHC10Q8TBK6 192 aa7.84□□□□□ -1.15
SF3A1-208ENST00000485618 UTP15Q8TED0 518 aaKnown RBP7.84□□□□□ -1.15
SF3A1-208ENST00000485618 TTC9Q92623 222 aa7.84□□□□□ -1.15
SF3A1-208ENST00000485618 MS4A6EQ96DS6 147 aa7.84□□□□□ -1.15
SF3A1-208ENST00000485618 C10orf90Q96M02 699 aa7.84□□□□□ -1.15
SF3A1-208ENST00000485618 NSUN5Q96P11 429 aaKnown RBP7.84□□□□□ -1.15
SF3A1-208ENST00000485618 CDK15Q96Q40 435 aa7.84□□□□□ -1.15
SF3A1-208ENST00000485618 MTERF1Q99551 399 aaKnown RBP7.84□□□□□ -1.15
SF3A1-208ENST00000485618 SH3GL2Q99962 352 aa7.84□□□□□ -1.15
SF3A1-208ENST00000485618 GATA5Q9BWX5 397 aaPredicted RBP7.84□□□□□ -1.15
SF3A1-208ENST00000485618 MS4A8Q9BY19 250 aa7.84□□□□□ -1.15
SF3A1-208ENST00000485618 TGIF2Q9GZN2 237 aa7.84□□□□□ -1.15
SF3A1-208ENST00000485618 GSTO2Q9H4Y5 243 aa7.84□□□□□ -1.15
SF3A1-208ENST00000485618 ACTL8Q9H568 366 aa7.84□□□□□ -1.15
SF3A1-208ENST00000485618 ZBTB26Q9HCK0 441 aa7.84□□□□□ -1.15
SF3A1-208ENST00000485618 LYRM4Q9HD34 91 aa7.84□□□□□ -1.15
SF3A1-208ENST00000485618 DMRT3Q9NQL9 472 aa7.84□□□□□ -1.15
SF3A1-208ENST00000485618 VPS29Q9UBQ0 182 aa7.84□□□□□ -1.15
SF3A1-208ENST00000485618 C19orf25Q9UFG5 118 aaPredicted RBP7.84□□□□□ -1.15
SF3A1-208ENST00000485618 PHF11Q9UIL8 331 aa7.84□□□□□ -1.15
SF3A1-208ENST00000485618 ADAM29Q9UKF5 820 aa7.84□□□□□ -1.15
SF3A1-208ENST00000485618 TCFL5Q9UL49 500 aa7.84□□□□□ -1.15
SF3A1-208ENST00000485618 SLC12A4Q9UP95 1085 aa7.84□□□□□ -1.15
SF3A1-208ENST00000485618 PTRH2Q9Y3E5 179 aaKnown RBP7.84□□□□□ -1.15
SF3A1-208ENST00000485618 MAU2Q9Y6X3 613 aa7.84□□□□□ -1.15
SF3A1-208ENST00000485618 LOC101059948A0A1B0GTJ6 334 aa7.83□□□□□ -1.16
SF3A1-208ENST00000485618 WDR91A4D1P6 747 aa7.83□□□□□ -1.16
SF3A1-208ENST00000485618 MAGEB17A8MXT2 336 aa7.83□□□□□ -1.16
SF3A1-208ENST00000485618 B8ZZF3 427 aa7.83□□□□□ -1.16
SF3A1-208ENST00000485618 SLCO1B7G3V0H7 640 aa7.83□□□□□ -1.16
SF3A1-208ENST00000485618 SGK494L7N484 410 aa7.83□□□□□ -1.16
SF3A1-208ENST00000485618 AGPSO00116 658 aa7.83□□□□□ -1.16
SF3A1-208ENST00000485618 MANBAO00462 879 aa7.83□□□□□ -1.16
SF3A1-208ENST00000485618 FFAR3O14843 346 aa7.83□□□□□ -1.16
SF3A1-208ENST00000485618 GPR42O15529 346 aa7.83□□□□□ -1.16
SF3A1-208ENST00000485618 P2RX6O15547 441 aa7.83□□□□□ -1.16
SF3A1-208ENST00000485618 EFSO43281 561 aa7.83□□□□□ -1.16
SF3A1-208ENST00000485618 SLC28A2O43868 658 aa7.83□□□□□ -1.16
SF3A1-208ENST00000485618 NRP2O60462 931 aa7.83□□□□□ -1.16
SF3A1-208ENST00000485618 OR4F21O95013 312 aa7.83□□□□□ -1.16
SF3A1-208ENST00000485618 ZGLP1P0C6A0 271 aa7.83□□□□□ -1.16
SF3A1-208ENST00000485618 ICAM2P13598 275 aa7.83□□□□□ -1.16
SF3A1-208ENST00000485618 CREB1P16220 341 aa7.83□□□□□ -1.16
SF3A1-208ENST00000485618 PCSK2P16519 638 aa7.83□□□□□ -1.16
SF3A1-208ENST00000485618 IL1RNP18510 177 aa7.83□□□□□ -1.16
SF3A1-208ENST00000485618 TSPAN8P19075 237 aa7.83□□□□□ -1.16
SF3A1-208ENST00000485618 CD22P20273 847 aa7.83□□□□□ -1.16
SF3A1-208ENST00000485618 HIST1H1TP22492 207 aaPredicted RBP7.83□□□□□ -1.16
SF3A1-208ENST00000485618 PPP2R1BP30154 601 aa7.83□□□□□ -1.16
SF3A1-208ENST00000485618 BUD31P41223 144 aaPredicted RBP7.83□□□□□ -1.16
SF3A1-208ENST00000485618 GSTM5P46439 218 aa7.83□□□□□ -1.16
SF3A1-208ENST00000485618 GCGRP47871 477 aa7.83□□□□□ -1.16
SF3A1-208ENST00000485618 RRADP55042 308 aa7.83□□□□□ -1.16
SF3A1-208ENST00000485618 ABCE1P61221 599 aaKnown RBP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms