RNA–Protein interactions for RNA: ENST00000485513.1

HLA-F-227, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-227ENST00000485513 MAPKAPK3Q16644 382 aa24.05■■□□□ 1.44
HLA-F-227ENST00000485513 RPTNQ6XPR3 784 aa24.05■■□□□ 1.44
HLA-F-227ENST00000485513 PNPLA5Q7Z6Z6 429 aaPredicted RBP24.05■■□□□ 1.44
HLA-F-227ENST00000485513 KRT78Q8N1N4 520 aa24.05■■□□□ 1.44
HLA-F-227ENST00000485513 ZNF808Q8N4W9 903 aaPredicted RBP24.05■■□□□ 1.44
HLA-F-227ENST00000485513 NFAM1Q8NET5 270 aaPredicted RBP24.05■■□□□ 1.44
HLA-F-227ENST00000485513 CCT6BQ92526 530 aa24.05■■□□□ 1.44
HLA-F-227ENST00000485513 MTO1Q9Y2Z2 717 aaKnown RBP24.05■■□□□ 1.44
HLA-F-227ENST00000485513 MMACHCQ9Y4U1 282 aa24.05■■□□□ 1.44
HLA-F-227ENST00000485513 KLF2Q9Y5W3 355 aaPredicted RBP24.05■■□□□ 1.44
HLA-F-227ENST00000485513 NPIPA5E9PKD4 350 aa24.04■■□□□ 1.44
HLA-F-227ENST00000485513 CYB561P49447 251 aa24.04■■□□□ 1.44
HLA-F-227ENST00000485513 MRPS25P82663 173 aaKnown RBP24.04■■□□□ 1.44
HLA-F-227ENST00000485513 C3AR1Q16581 482 aa24.04■■□□□ 1.44
HLA-F-227ENST00000485513 TSPAN17Q96FV3 270 aa24.04■■□□□ 1.44
HLA-F-227ENST00000485513 CAPS2Q9BXY5 557 aa24.04■■□□□ 1.44
HLA-F-227ENST00000485513 DEFB126Q9BYW3 111 aa24.04■■□□□ 1.44
HLA-F-227ENST00000485513 CAB39LQ9H9S4 337 aa24.04■■□□□ 1.44
HLA-F-227ENST00000485513 TXNDC16Q9P2K2 825 aa24.04■■□□□ 1.44
HLA-F-227ENST00000485513 NPIPA1Q9UND3 350 aa24.04■■□□□ 1.44
HLA-F-227ENST00000485513 ABCA12Q86UK0 2595 aa24.03■■□□□ 1.44
HLA-F-227ENST00000485513 A0A0G2JN53 185 aa24.03■■□□□ 1.44
HLA-F-227ENST00000485513 ERI3O43414 337 aaKnown RBP24.03■■□□□ 1.44
HLA-F-227ENST00000485513 WISP3O95389 354 aaPredicted RBP24.03■■□□□ 1.44
HLA-F-227ENST00000485513 GSTM2P28161 218 aa24.03■■□□□ 1.44
HLA-F-227ENST00000485513 SSTR1P30872 391 aa24.03■■□□□ 1.44
HLA-F-227ENST00000485513 HNRNPH1P31943 449 aaKnown RBP24.03■■□□□ 1.44
HLA-F-227ENST00000485513 CALCOCO2Q13137 446 aa24.03■■□□□ 1.44
HLA-F-227ENST00000485513 TCAIMQ8N3R3 496 aa24.03■■□□□ 1.44
HLA-F-227ENST00000485513 SPATA6LQ8N4H0 392 aa24.03■■□□□ 1.44
HLA-F-227ENST00000485513 CDKL2Q92772 493 aa24.03■■□□□ 1.44
HLA-F-227ENST00000485513 MS4A6EQ96DS6 147 aa24.03■■□□□ 1.44
HLA-F-227ENST00000485513 NPLQ9BXD5 320 aaPredicted RBP24.03■■□□□ 1.44
HLA-F-227ENST00000485513 NT5DC2Q9H857 520 aa24.03■■□□□ 1.44
HLA-F-227ENST00000485513 TRIM45Q9H8W5 580 aaPredicted RBP24.03■■□□□ 1.44
HLA-F-227ENST00000485513 SAYSD1Q9NPB0 183 aa24.03■■□□□ 1.44
HLA-F-227ENST00000485513 WWOXQ9NZC7 414 aa24.03■■□□□ 1.44
HLA-F-227ENST00000485513 GPRC5BQ9NZH0 403 aa24.03■■□□□ 1.44
HLA-F-227ENST00000485513 TINAGQ9UJW2 476 aa24.03■■□□□ 1.44
HLA-F-227ENST00000485513 ZNF835Q9Y2P0 537 aa24.03■■□□□ 1.44
HLA-F-227ENST00000485513 LRIT2A6NDA9 550 aa24.02■■□□□ 1.44
HLA-F-227ENST00000485513 ENO4A6NNW6 628 aa24.02■■□□□ 1.44
HLA-F-227ENST00000485513 CXorf49A8MYA2 514 aaPredicted RBP24.02■■□□□ 1.44
HLA-F-227ENST00000485513 FCHO1O14526 889 aa24.02■■□□□ 1.44
HLA-F-227ENST00000485513 NME2P1O60361 137 aa24.02■■□□□ 1.44
HLA-F-227ENST00000485513 CCDC166P0CW27 439 aa24.02■■□□□ 1.44
HLA-F-227ENST00000485513 ESRRAP11474 423 aaPredicted RBP24.02■■□□□ 1.44
HLA-F-227ENST00000485513 PRF1P14222 555 aa24.02■■□□□ 1.44
HLA-F-227ENST00000485513 NME2P22392 152 aa24.02■■□□□ 1.44
HLA-F-227ENST00000485513 GRNP28799 593 aaKnown RBP24.02■■□□□ 1.44
HLA-F-227ENST00000485513 RUNX2Q13950 521 aa24.02■■□□□ 1.44
HLA-F-227ENST00000485513 BNC2Q6ZN30 1099 aaPredicted RBP24.02■■□□□ 1.44
HLA-F-227ENST00000485513 GPSM1Q86YR5 675 aa24.02■■□□□ 1.44
HLA-F-227ENST00000485513 SPPL2CQ8IUH8 684 aa24.02■■□□□ 1.44
HLA-F-227ENST00000485513 SIAH3Q8IW03 269 aa24.02■■□□□ 1.44
HLA-F-227ENST00000485513 B3GNT7Q8NFL0 401 aa24.02■■□□□ 1.44
HLA-F-227ENST00000485513 TMEM125Q96AQ2 219 aa24.02■■□□□ 1.44
HLA-F-227ENST00000485513 SEC16BQ96JE7 1060 aa24.02■■□□□ 1.44
HLA-F-227ENST00000485513 PDLIM2Q96JY6 352 aa24.02■■□□□ 1.44
HLA-F-227ENST00000485513 TMEM79Q9BSE2 394 aa24.02■■□□□ 1.44
HLA-F-227ENST00000485513 PITHD1Q9GZP4 211 aaPredicted RBP24.02■■□□□ 1.44
HLA-F-227ENST00000485513 DPH5Q9H2P9 285 aa24.02■■□□□ 1.44
HLA-F-227ENST00000485513 RUBCNLQ9H714 662 aa24.02■■□□□ 1.44
HLA-F-227ENST00000485513 CNOT10Q9H9A5 744 aaKnown RBP24.02■■□□□ 1.44
HLA-F-227ENST00000485513 DNAJC11Q9NVH1 559 aa24.02■■□□□ 1.44
HLA-F-227ENST00000485513 WHRNQ9P202 907 aa24.02■■□□□ 1.44
HLA-F-227ENST00000485513 GTF3C1Q12789 2109 aa24.01■■□□□ 1.43
HLA-F-227ENST00000485513 A0A088AWK7 358 aa24.01■■□□□ 1.43
HLA-F-227ENST00000485513 FAM187AA6NFU0 413 aa24.01■■□□□ 1.43
HLA-F-227ENST00000485513 ANKDD1BA6NHY2 528 aa24.01■■□□□ 1.43
HLA-F-227ENST00000485513 EIF3HO15372 352 aaKnown RBP eCLIP24.01■■□□□ 1.43
HLA-F-227ENST00000485513 TAPBPO15533 448 aa24.01■■□□□ 1.43
HLA-F-227ENST00000485513 PHGDHO43175 533 aaKnown RBP24.01■■□□□ 1.43
HLA-F-227ENST00000485513 ASNA1O43681 348 aa24.01■■□□□ 1.43
HLA-F-227ENST00000485513 CLEC3AO75596 197 aa24.01■■□□□ 1.43
HLA-F-227ENST00000485513 MYO1DO94832 1006 aa24.01■■□□□ 1.43
HLA-F-227ENST00000485513 ZNF10P21506 573 aaPredicted RBP24.01■■□□□ 1.43
HLA-F-227ENST00000485513 TRHRP34981 398 aaPredicted RBP24.01■■□□□ 1.43
HLA-F-227ENST00000485513 GGT5P36269 586 aa24.01■■□□□ 1.43
HLA-F-227ENST00000485513 HLCSP50747 726 aa24.01■■□□□ 1.43
HLA-F-227ENST00000485513 CLCN2P51788 898 aa24.01■■□□□ 1.43
HLA-F-227ENST00000485513 NAA30Q147X3 362 aaPredicted RBP24.01■■□□□ 1.43
HLA-F-227ENST00000485513 TERF2Q15554 542 aa24.01■■□□□ 1.43
HLA-F-227ENST00000485513 CDKL4Q5MAI5 379 aa24.01■■□□□ 1.43
HLA-F-227ENST00000485513 Q6ZPB1 254 aaPredicted RBP24.01■■□□□ 1.43
HLA-F-227ENST00000485513 ZNF227Q86WZ6 799 aa24.01■■□□□ 1.43
HLA-F-227ENST00000485513 SCUBE1Q8IWY4 988 aa24.01■■□□□ 1.43
HLA-F-227ENST00000485513 SRRM1Q8IYB3 904 aaKnown RBP24.01■■□□□ 1.43
HLA-F-227ENST00000485513 ARMC10Q8N2F6 343 aa24.01■■□□□ 1.43
HLA-F-227ENST00000485513 APCDD1LQ8NCL9 501 aa24.01■■□□□ 1.43
HLA-F-227ENST00000485513 CPNE1Q99829 537 aa24.01■■□□□ 1.43
HLA-F-227ENST00000485513 ERP44Q9BS26 406 aa24.01■■□□□ 1.43
HLA-F-227ENST00000485513 PRTFDC1Q9NRG1 225 aa24.01■■□□□ 1.43
HLA-F-227ENST00000485513 PNO1Q9NRX1 252 aaKnown RBP24.01■■□□□ 1.43
HLA-F-227ENST00000485513 PYCARDQ9ULZ3 195 aa24.01■■□□□ 1.43
HLA-F-227ENST00000485513 TRBV11-1A0A0K0K1C0 115 aa24■■□□□ 1.43
HLA-F-227ENST00000485513 CLDN4O14493 209 aa24■■□□□ 1.43
HLA-F-227ENST00000485513 CLGNO14967 610 aa24■■□□□ 1.43
HLA-F-227ENST00000485513 FANCGO15287 622 aa24■■□□□ 1.43
HLA-F-227ENST00000485513 B3GALT2O43825 422 aa24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms