RNA–Protein interactions for RNA: ENST00000485479.5

APTX-227, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,986 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-227ENST00000485479 MRPL14Q6P1L8 145 aaKnown RBP11.24□□□□□ -0.61
APTX-227ENST00000485479 ABHD17CQ6PCB6 329 aa11.24□□□□□ -0.61
APTX-227ENST00000485479 ABHD13Q7L211 337 aa11.24□□□□□ -0.61
APTX-227ENST00000485479 AFAP1L2Q8N4X5 818 aa11.24□□□□□ -0.61
APTX-227ENST00000485479 TTLQ8NG68 377 aa11.24□□□□□ -0.61
APTX-227ENST00000485479 OR51Q1Q8NH59 317 aa11.24□□□□□ -0.61
APTX-227ENST00000485479 STT3BQ8TCJ2 826 aa11.24□□□□□ -0.61
APTX-227ENST00000485479 NT5DC2Q9H857 520 aa11.24□□□□□ -0.61
APTX-227ENST00000485479 ENAMQ9NRM1 1142 aa11.24□□□□□ -0.61
APTX-227ENST00000485479 TRPS1Q9UHF7 1281 aa11.24□□□□□ -0.61
APTX-227ENST00000485479 SLC12A4Q9UP95 1085 aa11.24□□□□□ -0.61
APTX-227ENST00000485479 MANBAO00462 879 aa11.23□□□□□ -0.61
APTX-227ENST00000485479 EEDO75530 441 aaKnown RBP11.23□□□□□ -0.61
APTX-227ENST00000485479 CRCPO75575 148 aa11.23□□□□□ -0.61
APTX-227ENST00000485479 CREG1O75629 220 aa11.23□□□□□ -0.61
APTX-227ENST00000485479 UMODP07911 640 aa11.23□□□□□ -0.61
APTX-227ENST00000485479 ZGLP1P0C6A0 271 aa11.23□□□□□ -0.61
APTX-227ENST00000485479 STXBP1P61764 594 aaKnown RBP11.23□□□□□ -0.61
APTX-227ENST00000485479 IFT88Q13099 833 aa11.23□□□□□ -0.61
APTX-227ENST00000485479 CHAF1BQ13112 559 aa11.23□□□□□ -0.61
APTX-227ENST00000485479 DSG2Q14126 1118 aa11.23□□□□□ -0.61
APTX-227ENST00000485479 HERC3Q15034 1050 aa11.23□□□□□ -0.61
APTX-227ENST00000485479 ADPRMQ3LIE5 342 aa11.23□□□□□ -0.61
APTX-227ENST00000485479 GGTA1PQ4G0N0 100 aa11.23□□□□□ -0.61
APTX-227ENST00000485479 HHATQ5VTY9 493 aa11.23□□□□□ -0.61
APTX-227ENST00000485479 PRMT9Q6P2P2 845 aa11.23□□□□□ -0.61
APTX-227ENST00000485479 TRIM40Q6P9F5 258 aa11.23□□□□□ -0.61
APTX-227ENST00000485479 FAM47BQ8NA70 645 aa11.23□□□□□ -0.61
APTX-227ENST00000485479 OR2L5Q8NG80 312 aa11.23□□□□□ -0.61
APTX-227ENST00000485479 UBE2E3Q969T4 207 aa11.23□□□□□ -0.61
APTX-227ENST00000485479 GAL3ST3Q96A11 431 aa11.23□□□□□ -0.61
APTX-227ENST00000485479 C8orf44Q96CB5 159 aa11.23□□□□□ -0.61
APTX-227ENST00000485479 FAR2Q96K12 515 aa11.23□□□□□ -0.61
APTX-227ENST00000485479 PPP1R36Q96LQ0 422 aa11.23□□□□□ -0.61
APTX-227ENST00000485479 CSF3RQ99062 836 aa11.23□□□□□ -0.61
APTX-227ENST00000485479 ZNF282Q9UDV7 671 aaPredicted RBP11.23□□□□□ -0.61
APTX-227ENST00000485479 MAP4K5Q9Y4K4 846 aa11.23□□□□□ -0.61
APTX-227ENST00000485479 SLC22A7Q9Y694 548 aa11.23□□□□□ -0.61
APTX-227ENST00000485479 CACNA1BQ00975 2339 aa11.23□□□□□ -0.61
APTX-227ENST00000485479 CDC14CA4D256 554 aa11.23□□□□□ -0.61
APTX-227ENST00000485479 CHST10O43529 356 aa11.23□□□□□ -0.61
APTX-227ENST00000485479 SMIM10L1P0DMW3 83 aa11.23□□□□□ -0.61
APTX-227ENST00000485479 SSR2P43308 183 aa11.23□□□□□ -0.61
APTX-227ENST00000485479 RAP1GDS1P52306 607 aa11.23□□□□□ -0.61
APTX-227ENST00000485479 HNRNPFP52597 415 aaKnown RBP11.23□□□□□ -0.61
APTX-227ENST00000485479 BTKQ06187 659 aa11.23□□□□□ -0.61
APTX-227ENST00000485479 RUNX2Q13950 521 aa11.23□□□□□ -0.61
APTX-227ENST00000485479 RCN2Q14257 317 aa11.23□□□□□ -0.61
APTX-227ENST00000485479 SH2D4BQ5SQS7 431 aa11.23□□□□□ -0.61
APTX-227ENST00000485479 YOD1Q5VVQ6 348 aaPredicted RBP11.23□□□□□ -0.61
APTX-227ENST00000485479 OVCH1Q7RTY7 1134 aa11.23□□□□□ -0.61
APTX-227ENST00000485479 ZC3H7AQ8IWR0 971 aaKnown RBP11.23□□□□□ -0.61
APTX-227ENST00000485479 TMEM52Q8NDY8 209 aa11.23□□□□□ -0.61
APTX-227ENST00000485479 SMIM10Q96HG1 83 aa11.23□□□□□ -0.61
APTX-227ENST00000485479 ZNF717Q9BY31 904 aaPredicted RBP11.23□□□□□ -0.61
APTX-227ENST00000485479 ACPTQ9BZG2 426 aa11.23□□□□□ -0.61
APTX-227ENST00000485479 PITHD1Q9GZP4 211 aaPredicted RBP11.23□□□□□ -0.61
APTX-227ENST00000485479 PRDM7Q9NQW5 492 aa11.23□□□□□ -0.61
APTX-227ENST00000485479 GIMAP2Q9UG22 337 aa11.23□□□□□ -0.61
APTX-227ENST00000485479 WASHC1A8K0Z3 465 aa11.22□□□□□ -0.61
APTX-227ENST00000485479 C21orf140B9A014 251 aa11.22□□□□□ -0.61
APTX-227ENST00000485479 B4GALT2O60909 372 aa11.22□□□□□ -0.61
APTX-227ENST00000485479 SKAP2O75563 359 aaPredicted RBP11.22□□□□□ -0.61
APTX-227ENST00000485479 FOLR3P41439 243 aa11.22□□□□□ -0.61
APTX-227ENST00000485479 OCA2Q04671 838 aa11.22□□□□□ -0.61
APTX-227ENST00000485479 DEPDC1Q5TB30 811 aa11.22□□□□□ -0.61
APTX-227ENST00000485479 BROXQ5VW32 411 aa11.22□□□□□ -0.61
APTX-227ENST00000485479 CA13Q8N1Q1 262 aa11.22□□□□□ -0.61
APTX-227ENST00000485479 UCN3Q969E3 161 aa11.22□□□□□ -0.61
APTX-227ENST00000485479 MIEF2Q96C03 454 aa11.22□□□□□ -0.61
APTX-227ENST00000485479 REPS1Q96D71 796 aa11.22□□□□□ -0.61
APTX-227ENST00000485479 MVB12AQ96EY5 273 aa11.22□□□□□ -0.61
APTX-227ENST00000485479 CMTM7Q96FZ5 175 aa11.22□□□□□ -0.61
APTX-227ENST00000485479 SLC45A3Q96JT2 553 aa11.22□□□□□ -0.61
APTX-227ENST00000485479 DPH2Q9BQC3 489 aaPredicted RBP11.22□□□□□ -0.61
APTX-227ENST00000485479 CRB3Q9BUF7 120 aa11.22□□□□□ -0.61
APTX-227ENST00000485479 COPS7BQ9H9Q2 264 aaPredicted RBP11.22□□□□□ -0.61
APTX-227ENST00000485479 NKIRAS1Q9NYS0 192 aa11.22□□□□□ -0.61
APTX-227ENST00000485479 ZDHHC2Q9UIJ5 367 aa11.22□□□□□ -0.61
APTX-227ENST00000485479 KCND3Q9UK17 655 aa11.22□□□□□ -0.61
APTX-227ENST00000485479 FBXW2Q9UKT8 454 aa11.22□□□□□ -0.61
APTX-227ENST00000485479 MKL2Q9ULH7 1088 aa11.22□□□□□ -0.61
APTX-227ENST00000485479 SNX6Q9UNH7 406 aa11.22□□□□□ -0.61
APTX-227ENST00000485479 SSUH2Q9Y2M2 353 aa11.22□□□□□ -0.61
APTX-227ENST00000485479 IGHV3-20A0A0C4DH32 117 aa11.21□□□□□ -0.61
APTX-227ENST00000485479 URADA6NGE7 173 aa11.21□□□□□ -0.61
APTX-227ENST00000485479 H0YIG0 161 aa11.21□□□□□ -0.61
APTX-227ENST00000485479 H3BQF6 201 aa11.21□□□□□ -0.61
APTX-227ENST00000485479 ULK1O75385 1050 aa11.21□□□□□ -0.61
APTX-227ENST00000485479 DNAJB5O75953 348 aa11.21□□□□□ -0.61
APTX-227ENST00000485479 BMP10O95393 424 aa11.21□□□□□ -0.61
APTX-227ENST00000485479 JUNP05412 331 aaKnown RBP11.21□□□□□ -0.61
APTX-227ENST00000485479 PIK3CBP42338 1070 aa11.21□□□□□ -0.61
APTX-227ENST00000485479 EMP3P54852 163 aa11.21□□□□□ -0.61
APTX-227ENST00000485479 PKNOX1P55347 436 aa11.21□□□□□ -0.61
APTX-227ENST00000485479 TMPRSS3P57727 454 aa11.21□□□□□ -0.61
APTX-227ENST00000485479 BTG2P78543 158 aa11.21□□□□□ -0.61
APTX-227ENST00000485479 CPZQ66K79 652 aa11.21□□□□□ -0.61
APTX-227ENST00000485479 LANCL3Q6ZV70 420 aa11.21□□□□□ -0.61
APTX-227ENST00000485479 CHSY3Q70JA7 882 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms