RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 RUNX2Q13950 521 aa11.55□□□□□ -0.56
MSH5-216ENST00000484309 SETDB1Q15047 1291 aa11.55□□□□□ -0.56
MSH5-216ENST00000484309 ACAP2Q15057 778 aa11.55□□□□□ -0.56
MSH5-216ENST00000484309 TECRLQ5HYJ1 363 aa11.55□□□□□ -0.56
MSH5-216ENST00000484309 CRB2Q5IJ48 1285 aa11.55□□□□□ -0.56
MSH5-216ENST00000484309 FCRLBQ6BAA4 426 aa11.55□□□□□ -0.56
MSH5-216ENST00000484309 KLC3Q6P597 504 aa11.55□□□□□ -0.56
MSH5-216ENST00000484309 PAPD4Q6PIY7 484 aaKnown RBP11.55□□□□□ -0.56
MSH5-216ENST00000484309 IGFL2Q6UWQ7 119 aa11.55□□□□□ -0.56
MSH5-216ENST00000484309 TAOK1Q7L7X3 1001 aa11.55□□□□□ -0.56
MSH5-216ENST00000484309 MYLK4Q86YV6 388 aaPredicted RBP11.55□□□□□ -0.56
MSH5-216ENST00000484309 CYP4X1Q8N118 509 aa11.55□□□□□ -0.56
MSH5-216ENST00000484309 RHEBL1Q8TAI7 183 aa11.55□□□□□ -0.56
MSH5-216ENST00000484309 SNRNP40Q96DI7 357 aaKnown RBP11.55□□□□□ -0.56
MSH5-216ENST00000484309 WDR34Q96EX3 536 aa11.55□□□□□ -0.56
MSH5-216ENST00000484309 SCYL1Q96KG9 808 aa11.55□□□□□ -0.56
MSH5-216ENST00000484309 PTCHD1Q96NR3 888 aa11.55□□□□□ -0.56
MSH5-216ENST00000484309 F2RL3Q96RI0 385 aa11.55□□□□□ -0.56
MSH5-216ENST00000484309 ASF1BQ9NVP2 202 aa11.55□□□□□ -0.56
MSH5-216ENST00000484309 COPG2Q9UBF2 871 aa11.55□□□□□ -0.56
MSH5-216ENST00000484309 VPS4AQ9UN37 437 aa11.55□□□□□ -0.56
MSH5-216ENST00000484309 NTNG1Q9Y2I2 539 aa11.55□□□□□ -0.56
MSH5-216ENST00000484309 ANGPTL3Q9Y5C1 460 aa11.55□□□□□ -0.56
MSH5-216ENST00000484309 PCDHGA10Q9Y5H3 936 aa11.55□□□□□ -0.56
MSH5-216ENST00000484309 SETXQ7Z333 2677 aaKnown RBP11.55□□□□□ -0.56
MSH5-216ENST00000484309 FLNBO75369 2602 aaKnown RBP11.55□□□□□ -0.56
MSH5-216ENST00000484309 A8MUA0 341 aa11.54□□□□□ -0.56
MSH5-216ENST00000484309 MAGEB17A8MXT2 336 aa11.54□□□□□ -0.56
MSH5-216ENST00000484309 KRT38O76015 456 aa11.54□□□□□ -0.56
MSH5-216ENST00000484309 CYC1P08574 325 aa11.54□□□□□ -0.56
MSH5-216ENST00000484309 EPB42P16452 691 aa11.54□□□□□ -0.56
MSH5-216ENST00000484309 IL10P22301 178 aa11.54□□□□□ -0.56
MSH5-216ENST00000484309 JAK1P23458 1154 aa11.54□□□□□ -0.56
MSH5-216ENST00000484309 HNRNPFP52597 415 aaKnown RBP11.54□□□□□ -0.56
MSH5-216ENST00000484309 ZNF33BQ06732 778 aa11.54□□□□□ -0.56
MSH5-216ENST00000484309 MRPL49Q13405 166 aaKnown RBP11.54□□□□□ -0.56
MSH5-216ENST00000484309 LAPTM5Q13571 262 aa11.54□□□□□ -0.56
MSH5-216ENST00000484309 ZNF169Q14929 603 aaPredicted RBP11.54□□□□□ -0.56
MSH5-216ENST00000484309 HIST2H2ACQ16777 129 aaPredicted RBP11.54□□□□□ -0.56
MSH5-216ENST00000484309 PAGE2BQ5JRK9 111 aa11.54□□□□□ -0.56
MSH5-216ENST00000484309 TEX35Q5T0J7 233 aa11.54□□□□□ -0.56
MSH5-216ENST00000484309 HIST2H2AA3Q6FI13 130 aa11.54□□□□□ -0.56
MSH5-216ENST00000484309 NIPAL1Q6NVV3 410 aa11.54□□□□□ -0.56
MSH5-216ENST00000484309 TRIM40Q6P9F5 258 aa11.54□□□□□ -0.56
MSH5-216ENST00000484309 RIPOR1Q6ZS17 1223 aa11.54□□□□□ -0.56
MSH5-216ENST00000484309 CCDC91Q7Z6B0 441 aa11.54□□□□□ -0.56
MSH5-216ENST00000484309 PTGR2Q8N8N7 351 aaPredicted RBP11.54□□□□□ -0.56
MSH5-216ENST00000484309 FAM47BQ8NA70 645 aa11.54□□□□□ -0.56
MSH5-216ENST00000484309 TMEM52Q8NDY8 209 aa11.54□□□□□ -0.56
MSH5-216ENST00000484309 PLPP5Q8NEB5 264 aa11.54□□□□□ -0.56
MSH5-216ENST00000484309 OR2L5Q8NG80 312 aa11.54□□□□□ -0.56
MSH5-216ENST00000484309 QRFPRQ96P65 431 aa11.54□□□□□ -0.56
MSH5-216ENST00000484309 PITHD1Q9GZP4 211 aaPredicted RBP11.54□□□□□ -0.56
MSH5-216ENST00000484309 REXO4Q9GZR2 422 aaKnown RBP11.54□□□□□ -0.56
MSH5-216ENST00000484309 COPS7BQ9H9Q2 264 aaPredicted RBP11.54□□□□□ -0.56
MSH5-216ENST00000484309 KCNK13Q9HB14 408 aa11.54□□□□□ -0.56
MSH5-216ENST00000484309 NECTIN3Q9NQS3 549 aa11.54□□□□□ -0.56
MSH5-216ENST00000484309 XPR1Q9UBH6 696 aa11.54□□□□□ -0.56
MSH5-216ENST00000484309 LRRK2Q5S007 2527 aa11.54□□□□□ -0.56
MSH5-216ENST00000484309 HECTD1Q9ULT8 2610 aa11.54□□□□□ -0.56
MSH5-216ENST00000484309 USP9XQ93008 2570 aaPredicted RBP11.53□□□□□ -0.56
MSH5-216ENST00000484309 MYOCOSA0A1B0GUC4 107 aa11.53□□□□□ -0.56
MSH5-216ENST00000484309 TCP11X1B4DZS4 312 aa11.53□□□□□ -0.56
MSH5-216ENST00000484309 SAP18O00422 153 aaKnown RBP11.53□□□□□ -0.56
MSH5-216ENST00000484309 RTCAO00442 366 aaKnown RBP11.53□□□□□ -0.56
MSH5-216ENST00000484309 RIPK2O43353 540 aa11.53□□□□□ -0.56
MSH5-216ENST00000484309 B3GALT2O43825 422 aa11.53□□□□□ -0.56
MSH5-216ENST00000484309 PRMT3O60678 531 aa11.53□□□□□ -0.56
MSH5-216ENST00000484309 WDPCPO95876 746 aa11.53□□□□□ -0.56
MSH5-216ENST00000484309 TGFB1P01137 390 aa11.53□□□□□ -0.56
MSH5-216ENST00000484309 MYBL2P10244 700 aa11.53□□□□□ -0.56
MSH5-216ENST00000484309 GSTM2P28161 218 aa11.53□□□□□ -0.56
MSH5-216ENST00000484309 GCAP28676 217 aa11.53□□□□□ -0.56
MSH5-216ENST00000484309 ALDH18A1P54886 795 aaKnown RBP11.53□□□□□ -0.56
MSH5-216ENST00000484309 GTF2H2Q13888 395 aa11.53□□□□□ -0.56
MSH5-216ENST00000484309 NAA30Q147X3 362 aaPredicted RBP11.53□□□□□ -0.56
MSH5-216ENST00000484309 NR6A1Q15406 480 aa11.53□□□□□ -0.56
MSH5-216ENST00000484309 TBCCQ15814 346 aa11.53□□□□□ -0.56
MSH5-216ENST00000484309 ADPRMQ3LIE5 342 aa11.53□□□□□ -0.56
MSH5-216ENST00000484309 PLAG1Q6DJT9 500 aa11.53□□□□□ -0.56
MSH5-216ENST00000484309 GRHL2Q6ISB3 625 aa11.53□□□□□ -0.56
MSH5-216ENST00000484309 GTF2H2CQ6P1K8 395 aa11.53□□□□□ -0.56
MSH5-216ENST00000484309 MED27Q6P2C8 311 aa11.53□□□□□ -0.56
MSH5-216ENST00000484309 ABHD17CQ6PCB6 329 aa11.53□□□□□ -0.56
MSH5-216ENST00000484309 QSOX2Q6ZRP7 698 aa11.53□□□□□ -0.56
MSH5-216ENST00000484309 GOLGA7Q7Z5G4 137 aa11.53□□□□□ -0.56
MSH5-216ENST00000484309 CLNKQ7Z7G1 428 aa11.53□□□□□ -0.56
MSH5-216ENST00000484309 GALNT11Q8NCW6 608 aa11.53□□□□□ -0.56
MSH5-216ENST00000484309 OR1N1Q8NGS0 311 aa11.53□□□□□ -0.56
MSH5-216ENST00000484309 ZNF473Q8WTR7 871 aaKnown RBP11.53□□□□□ -0.56
MSH5-216ENST00000484309 ISL2Q96A47 359 aa11.53□□□□□ -0.56
MSH5-216ENST00000484309 PHF21BQ96EK2 531 aa11.53□□□□□ -0.56
MSH5-216ENST00000484309 LMF1Q96S06 567 aa11.53□□□□□ -0.56
MSH5-216ENST00000484309 CSF3RQ99062 836 aa11.53□□□□□ -0.56
MSH5-216ENST00000484309 LPAR4Q99677 370 aa11.53□□□□□ -0.56
MSH5-216ENST00000484309 MS4A8Q9BY19 250 aa11.53□□□□□ -0.56
MSH5-216ENST00000484309 ACTR8Q9H981 624 aa11.53□□□□□ -0.56
MSH5-216ENST00000484309 COPG1Q9Y678 874 aaKnown RBP11.53□□□□□ -0.56
MSH5-216ENST00000484309 EML6Q6ZMW3 1958 aa11.53□□□□□ -0.56
MSH5-216ENST00000484309 RELNP78509 3460 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms