RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 LMF1Q96S06 567 aa9.45□□□□□ -0.9
CPSF4-213ENST00000484112 MRPL57Q9BQC6 102 aaKnown RBP9.45□□□□□ -0.9
CPSF4-213ENST00000484112 MESP1Q9BRJ9 268 aa9.45□□□□□ -0.9
CPSF4-213ENST00000484112 CRB3Q9BUF7 120 aa9.45□□□□□ -0.9
CPSF4-213ENST00000484112 MRPL46Q9H2W6 279 aaKnown RBP9.45□□□□□ -0.9
CPSF4-213ENST00000484112 MKKSQ9NPJ1 570 aaPredicted RBP9.45□□□□□ -0.9
CPSF4-213ENST00000484112 SEMA3GQ9NS98 782 aa9.45□□□□□ -0.9
CPSF4-213ENST00000484112 PTGFRNQ9P2B2 879 aa9.45□□□□□ -0.9
CPSF4-213ENST00000484112 OPTCQ9UBM4 332 aa9.45□□□□□ -0.9
CPSF4-213ENST00000484112 ADGRE2Q9UHX3 823 aa9.45□□□□□ -0.9
CPSF4-213ENST00000484112 SH2B3Q9UQQ2 575 aa9.45□□□□□ -0.9
CPSF4-213ENST00000484112 TSC22D4Q9Y3Q8 395 aa9.45□□□□□ -0.9
CPSF4-213ENST00000484112 POLEQ07864 2286 aa9.44□□□□□ -0.9
CPSF4-213ENST00000484112 DYTNA2CJ06 578 aa9.44□□□□□ -0.9
CPSF4-213ENST00000484112 UBXN8O00124 270 aa9.44□□□□□ -0.9
CPSF4-213ENST00000484112 CCL21O00585 134 aa9.44□□□□□ -0.9
CPSF4-213ENST00000484112 LCMT2O60294 686 aaKnown RBP9.44□□□□□ -0.9
CPSF4-213ENST00000484112 SMIM24O75264 130 aa9.44□□□□□ -0.9
CPSF4-213ENST00000484112 CLEC3AO75596 197 aa9.44□□□□□ -0.9
CPSF4-213ENST00000484112 WFS1O76024 890 aa9.44□□□□□ -0.9
CPSF4-213ENST00000484112 SERPINA6P08185 405 aa9.44□□□□□ -0.9
CPSF4-213ENST00000484112 GFAPP14136 432 aa9.44□□□□□ -0.9
CPSF4-213ENST00000484112 COX6B1P14854 86 aa9.44□□□□□ -0.9
CPSF4-213ENST00000484112 FBLP22087 321 aaKnown RBP9.44□□□□□ -0.9
CPSF4-213ENST00000484112 HTR1EP28566 365 aa9.44□□□□□ -0.9
CPSF4-213ENST00000484112 GDF5P43026 501 aa9.44□□□□□ -0.9
CPSF4-213ENST00000484112 HSPA7P48741 367 aa9.44□□□□□ -0.9
CPSF4-213ENST00000484112 NAA20P61599 178 aa9.44□□□□□ -0.9
CPSF4-213ENST00000484112 STXBP1P61764 594 aaKnown RBP9.44□□□□□ -0.9
CPSF4-213ENST00000484112 VSNL1P62760 191 aa9.44□□□□□ -0.9
CPSF4-213ENST00000484112 IRF9Q00978 393 aa9.44□□□□□ -0.9
CPSF4-213ENST00000484112 VWA2Q5GFL6 755 aa9.44□□□□□ -0.9
CPSF4-213ENST00000484112 C10orf62Q5T681 223 aaPredicted RBP9.44□□□□□ -0.9
CPSF4-213ENST00000484112 RPUSD3Q6P087 351 aaKnown RBP9.44□□□□□ -0.9
CPSF4-213ENST00000484112 GDF7Q7Z4P5 450 aa9.44□□□□□ -0.9
CPSF4-213ENST00000484112 AFAP1L2Q8N4X5 818 aa9.44□□□□□ -0.9
CPSF4-213ENST00000484112 MREGQ8N565 214 aa9.44□□□□□ -0.9
CPSF4-213ENST00000484112 UHMK1Q8TAS1 419 aaKnown RBP9.44□□□□□ -0.9
CPSF4-213ENST00000484112 AENQ8WTP8 325 aaKnown RBP9.44□□□□□ -0.9
CPSF4-213ENST00000484112 C8orf44Q96CB5 159 aa9.44□□□□□ -0.9
CPSF4-213ENST00000484112 LURAP1Q96LR2 239 aa9.44□□□□□ -0.9
CPSF4-213ENST00000484112 TAAR6Q96RI8 345 aa9.44□□□□□ -0.9
CPSF4-213ENST00000484112 YIPF2Q9BWQ6 316 aa9.44□□□□□ -0.9
CPSF4-213ENST00000484112 ROPN1BQ9BZX4 212 aaPredicted RBP9.44□□□□□ -0.9
CPSF4-213ENST00000484112 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.44□□□□□ -0.9
CPSF4-213ENST00000484112 ROPN1Q9HAT0 212 aaPredicted RBP9.44□□□□□ -0.9
CPSF4-213ENST00000484112 ANKHQ9HCJ1 492 aa9.44□□□□□ -0.9
CPSF4-213ENST00000484112 DCDC2Q9UHG0 476 aa9.44□□□□□ -0.9
CPSF4-213ENST00000484112 RAB21Q9UL25 225 aa9.44□□□□□ -0.9
CPSF4-213ENST00000484112 KLF2Q9Y5W3 355 aaPredicted RBP9.44□□□□□ -0.9
CPSF4-213ENST00000484112 CSMD1Q96PZ7 3565 aa9.43□□□□□ -0.9
CPSF4-213ENST00000484112 ZGRF1Q86YA3 2104 aa9.43□□□□□ -0.9
CPSF4-213ENST00000484112 A0A088AWK7 358 aa9.43□□□□□ -0.9
CPSF4-213ENST00000484112 NSG1A0A0A6YYJ2 146 aa9.43□□□□□ -0.9
CPSF4-213ENST00000484112 TRAV17A0A0B4J275 112 aa9.43□□□□□ -0.9
CPSF4-213ENST00000484112 FEZF1A0PJY2 475 aa9.43□□□□□ -0.9
CPSF4-213ENST00000484112 SYNDIG1LA6NDD5 238 aa9.43□□□□□ -0.9
CPSF4-213ENST00000484112 P2RX6O15547 441 aa9.43□□□□□ -0.9
CPSF4-213ENST00000484112 NDUFS4O43181 175 aa9.43□□□□□ -0.9
CPSF4-213ENST00000484112 FOXS1O43638 330 aa9.43□□□□□ -0.9
CPSF4-213ENST00000484112 CCNT2O60583 730 aaKnown RBP9.43□□□□□ -0.9
CPSF4-213ENST00000484112 UNC5CO95185 931 aa9.43□□□□□ -0.9
CPSF4-213ENST00000484112 HPP00738 406 aa9.43□□□□□ -0.9
CPSF4-213ENST00000484112 ACPPP15309 386 aa9.43□□□□□ -0.9
CPSF4-213ENST00000484112 ZNF10P21506 573 aaPredicted RBP9.43□□□□□ -0.9
CPSF4-213ENST00000484112 HSD17B3P37058 310 aa9.43□□□□□ -0.9
CPSF4-213ENST00000484112 HNF4AP41235 474 aa9.43□□□□□ -0.9
CPSF4-213ENST00000484112 TDGF1P3P51864 188 aa9.43□□□□□ -0.9
CPSF4-213ENST00000484112 ARFIP1P53367 373 aa9.43□□□□□ -0.9
CPSF4-213ENST00000484112 IRF8Q02556 426 aa9.43□□□□□ -0.9
CPSF4-213ENST00000484112 KLC1Q07866 573 aa9.43□□□□□ -0.9
CPSF4-213ENST00000484112 PFKFB4Q16877 469 aa9.43□□□□□ -0.9
CPSF4-213ENST00000484112 XKR6Q5GH73 641 aa9.43□□□□□ -0.9
CPSF4-213ENST00000484112 LIPJQ5W064 366 aa9.43□□□□□ -0.9
CPSF4-213ENST00000484112 PLD3Q8IV08 490 aa9.43□□□□□ -0.9
CPSF4-213ENST00000484112 HOMEZQ8IX15 550 aa9.43□□□□□ -0.9
CPSF4-213ENST00000484112 KBTBD2Q8IY47 623 aa9.43□□□□□ -0.9
CPSF4-213ENST00000484112 GSPT2Q8IYD1 628 aaKnown RBP9.43□□□□□ -0.9
CPSF4-213ENST00000484112 PLD6Q8N2A8 252 aaKnown RBP9.43□□□□□ -0.9
CPSF4-213ENST00000484112 SIRT6Q8N6T7 355 aa9.43□□□□□ -0.9
CPSF4-213ENST00000484112 SNX31Q8N9S9 440 aa9.43□□□□□ -0.9
CPSF4-213ENST00000484112 SRFBP1Q8NEF9 429 aaKnown RBP9.43□□□□□ -0.9
CPSF4-213ENST00000484112 BRIX1Q8TDN6 353 aaKnown RBP9.43□□□□□ -0.9
CPSF4-213ENST00000484112 MZB1Q8WU39 189 aa9.43□□□□□ -0.9
CPSF4-213ENST00000484112 NR4A3Q92570 626 aa9.43□□□□□ -0.9
CPSF4-213ENST00000484112 MIEF2Q96C03 454 aa9.43□□□□□ -0.9
CPSF4-213ENST00000484112 REPS1Q96D71 796 aa9.43□□□□□ -0.9
CPSF4-213ENST00000484112 MMABQ96EY8 250 aaPredicted RBP9.43□□□□□ -0.9
CPSF4-213ENST00000484112 CCDC120Q96HB5 630 aa9.43□□□□□ -0.9
CPSF4-213ENST00000484112 OR1F2PQ96R84 312 aa9.43□□□□□ -0.9
CPSF4-213ENST00000484112 C1QTNF3Q9BXJ4 246 aa9.43□□□□□ -0.9
CPSF4-213ENST00000484112 SLC6A16Q9GZN6 736 aa9.43□□□□□ -0.9
CPSF4-213ENST00000484112 RHBGQ9H310 441 aa9.43□□□□□ -0.9
CPSF4-213ENST00000484112 SYNPO2LQ9H987 977 aa9.43□□□□□ -0.9
CPSF4-213ENST00000484112 CHST11Q9NPF2 352 aa9.43□□□□□ -0.9
CPSF4-213ENST00000484112 PSD3Q9NYI0 1048 aa9.43□□□□□ -0.9
CPSF4-213ENST00000484112 XPR1Q9UBH6 696 aa9.43□□□□□ -0.9
CPSF4-213ENST00000484112 C3orf18Q9UK00 162 aa9.43□□□□□ -0.9
CPSF4-213ENST00000484112 ANGPTL3Q9Y5C1 460 aa9.43□□□□□ -0.9
CPSF4-213ENST00000484112 ANKRD12Q6UB98 2062 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms