RNA–Protein interactions for RNA: ENST00000483631.1

HPS4-213, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 737 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-213ENST00000483631 THAP3Q8WTV1 239 aaPredicted RBP18.6■□□□□ 0.57
HPS4-213ENST00000483631 KIAA1191Q96A73 305 aa18.6■□□□□ 0.57
HPS4-213ENST00000483631 MS4A6EQ96DS6 147 aa18.6■□□□□ 0.57
HPS4-213ENST00000483631 SIGLEC12Q96PQ1 595 aa18.6■□□□□ 0.57
HPS4-213ENST00000483631 TMEM79Q9BSE2 394 aa18.6■□□□□ 0.57
HPS4-213ENST00000483631 WWOXQ9NZC7 414 aa18.6■□□□□ 0.57
HPS4-213ENST00000483631 PCNX1Q96RV3 2341 aa18.6■□□□□ 0.57
HPS4-213ENST00000483631 GTF3C1Q12789 2109 aa18.59■□□□□ 0.57
HPS4-213ENST00000483631 C4orf51C9J302 202 aa18.59■□□□□ 0.57
HPS4-213ENST00000483631 CLGNO14967 610 aa18.59■□□□□ 0.57
HPS4-213ENST00000483631 TAPBPO15533 448 aa18.59■□□□□ 0.57
HPS4-213ENST00000483631 STK16O75716 305 aa18.59■□□□□ 0.57
HPS4-213ENST00000483631 UNC5CO95185 931 aa18.59■□□□□ 0.57
HPS4-213ENST00000483631 EEF1DP29692 281 aaKnown RBP18.59■□□□□ 0.57
HPS4-213ENST00000483631 HSD17B7P56937 341 aa18.59■□□□□ 0.57
HPS4-213ENST00000483631 ETF1P62495 437 aaKnown RBP18.59■□□□□ 0.57
HPS4-213ENST00000483631 BTG2P78543 158 aa18.59■□□□□ 0.57
HPS4-213ENST00000483631 NAB1Q13506 487 aa18.59■□□□□ 0.57
HPS4-213ENST00000483631 RCN2Q14257 317 aa18.59■□□□□ 0.57
HPS4-213ENST00000483631 FJX1Q86VR8 437 aa18.59■□□□□ 0.57
HPS4-213ENST00000483631 SCUBE1Q8IWY4 988 aa18.59■□□□□ 0.57
HPS4-213ENST00000483631 FAM98AQ8NCA5 519 aaKnown RBP18.59■□□□□ 0.57
HPS4-213ENST00000483631 NFAM1Q8NET5 270 aaPredicted RBP18.59■□□□□ 0.57
HPS4-213ENST00000483631 OR2L5Q8NG80 312 aa18.59■□□□□ 0.57
HPS4-213ENST00000483631 PTCD3Q96EY7 689 aaKnown RBP18.59■□□□□ 0.57
HPS4-213ENST00000483631 EFCAB11Q9BUY7 163 aa18.59■□□□□ 0.57
HPS4-213ENST00000483631 CAB39LQ9H9S4 337 aa18.59■□□□□ 0.57
HPS4-213ENST00000483631 PTBP2Q9UKA9 531 aaKnown RBP18.59■□□□□ 0.57
HPS4-213ENST00000483631 PPIEQ9UNP9 301 aaKnown RBP18.59■□□□□ 0.57
HPS4-213ENST00000483631 ANKDD1BA6NHY2 528 aa18.58■□□□□ 0.56
HPS4-213ENST00000483631 NCF1BA6NI72 391 aaPredicted RBP18.58■□□□□ 0.56
HPS4-213ENST00000483631 NCF1CA8MVU1 366 aaPredicted RBP18.58■□□□□ 0.56
HPS4-213ENST00000483631 CLDN4O14493 209 aa18.58■□□□□ 0.56
HPS4-213ENST00000483631 PHGDHO43175 533 aaKnown RBP18.58■□□□□ 0.56
HPS4-213ENST00000483631 ZG16O60844 167 aa18.58■□□□□ 0.56
HPS4-213ENST00000483631 PIAS1O75925 651 aa18.58■□□□□ 0.56
HPS4-213ENST00000483631 NEURL1O76050 574 aa18.58■□□□□ 0.56
HPS4-213ENST00000483631 NCF1P14598 390 aaPredicted RBP18.58■□□□□ 0.56
HPS4-213ENST00000483631 CASQ1P31415 396 aa18.58■□□□□ 0.56
HPS4-213ENST00000483631 HNRNPH1P31943 449 aaKnown RBP18.58■□□□□ 0.56
HPS4-213ENST00000483631 TRHRP34981 398 aaPredicted RBP18.58■□□□□ 0.56
HPS4-213ENST00000483631 CA7P43166 264 aa18.58■□□□□ 0.56
HPS4-213ENST00000483631 RAB38P57729 211 aa18.58■□□□□ 0.56
HPS4-213ENST00000483631 GPX6P59796 221 aa18.58■□□□□ 0.56
HPS4-213ENST00000483631 BTN3A2P78410 334 aa18.58■□□□□ 0.56
HPS4-213ENST00000483631 MRPS25P82663 173 aaKnown RBP18.58■□□□□ 0.56
HPS4-213ENST00000483631 LAPTM5Q13571 262 aa18.58■□□□□ 0.56
HPS4-213ENST00000483631 E2F2Q14209 437 aa18.58■□□□□ 0.56
HPS4-213ENST00000483631 TBCCQ15814 346 aa18.58■□□□□ 0.56
HPS4-213ENST00000483631 C18orf21Q32NC0 220 aaPredicted RBP18.58■□□□□ 0.56
HPS4-213ENST00000483631 PAGE2BQ5JRK9 111 aa18.58■□□□□ 0.56
HPS4-213ENST00000483631 C1QL3Q5VWW1 255 aa18.58■□□□□ 0.56
HPS4-213ENST00000483631 SLC25A25Q6KCM7 469 aa18.58■□□□□ 0.56
HPS4-213ENST00000483631 ZNF572Q7Z3I7 529 aaPredicted RBP18.58■□□□□ 0.56
HPS4-213ENST00000483631 CCDC91Q7Z6B0 441 aa18.58■□□□□ 0.56
HPS4-213ENST00000483631 RHBGQ9H310 441 aa18.58■□□□□ 0.56
HPS4-213ENST00000483631 CDCP1Q9H5V8 836 aa18.58■□□□□ 0.56
HPS4-213ENST00000483631 LRFN1Q9P244 771 aa18.58■□□□□ 0.56
HPS4-213ENST00000483631 SUCOQ9UBS9 1254 aaKnown RBP18.58■□□□□ 0.56
HPS4-213ENST00000483631 MRPS33Q9Y291 106 aaKnown RBP18.58■□□□□ 0.56
HPS4-213ENST00000483631 CREBBPQ92793 2442 aa18.58■□□□□ 0.56
HPS4-213ENST00000483631 CCDC189A1A4V9 331 aa18.57■□□□□ 0.56
HPS4-213ENST00000483631 ERI3O43414 337 aaKnown RBP18.57■□□□□ 0.56
HPS4-213ENST00000483631 B3GALT2O43825 422 aa18.57■□□□□ 0.56
HPS4-213ENST00000483631 MAN1A2O60476 641 aa18.57■□□□□ 0.56
HPS4-213ENST00000483631 SP1P08047 785 aa18.57■□□□□ 0.56
HPS4-213ENST00000483631 MAOAP21397 527 aa18.57■□□□□ 0.56
HPS4-213ENST00000483631 COL8A1P27658 744 aa18.57■□□□□ 0.56
HPS4-213ENST00000483631 STX2P32856 288 aa18.57■□□□□ 0.56
HPS4-213ENST00000483631 CASP2P42575 452 aa18.57■□□□□ 0.56
HPS4-213ENST00000483631 CYB561P49447 251 aa18.57■□□□□ 0.56
HPS4-213ENST00000483631 MLF1P58340 268 aa18.57■□□□□ 0.56
HPS4-213ENST00000483631 OC90Q02509 493 aaPredicted RBP18.57■□□□□ 0.56
HPS4-213ENST00000483631 PCDH1Q08174 1060 aa18.57■□□□□ 0.56
HPS4-213ENST00000483631 TGM3Q08188 693 aa18.57■□□□□ 0.56
HPS4-213ENST00000483631 OR4D1Q15615 310 aa18.57■□□□□ 0.56
HPS4-213ENST00000483631 PDK4Q16654 411 aa18.57■□□□□ 0.56
HPS4-213ENST00000483631 ZNF787Q6DD87 383 aa18.57■□□□□ 0.56
HPS4-213ENST00000483631 SPINK14Q6IE38 97 aa18.57■□□□□ 0.56
HPS4-213ENST00000483631 TRIM40Q6P9F5 258 aa18.57■□□□□ 0.56
HPS4-213ENST00000483631 LRRC70Q7Z2Q7 622 aa18.57■□□□□ 0.56
HPS4-213ENST00000483631 ZNF595Q8IYB9 648 aa18.57■□□□□ 0.56
HPS4-213ENST00000483631 CYP4X1Q8N118 509 aa18.57■□□□□ 0.56
HPS4-213ENST00000483631 SRFBP1Q8NEF9 429 aaKnown RBP18.57■□□□□ 0.56
HPS4-213ENST00000483631 B3GNT7Q8NFL0 401 aa18.57■□□□□ 0.56
HPS4-213ENST00000483631 STAG3L4Q8TBR4 150 aa18.57■□□□□ 0.56
HPS4-213ENST00000483631 GPR137Q96N19 417 aa18.57■□□□□ 0.56
HPS4-213ENST00000483631 FRMD6Q96NE9 622 aa18.57■□□□□ 0.56
HPS4-213ENST00000483631 QRFPRQ96P65 431 aa18.57■□□□□ 0.56
HPS4-213ENST00000483631 SERINC2Q96SA4 455 aa18.57■□□□□ 0.56
HPS4-213ENST00000483631 REXO4Q9GZR2 422 aaKnown RBP18.57■□□□□ 0.56
HPS4-213ENST00000483631 NECTIN3Q9NQS3 549 aa18.57■□□□□ 0.56
HPS4-213ENST00000483631 CD274Q9NZQ7 290 aa18.57■□□□□ 0.56
HPS4-213ENST00000483631 ENTPD4Q9Y227 616 aa18.57■□□□□ 0.56
HPS4-213ENST00000483631 FAM227AF5H4B4 570 aa18.56■□□□□ 0.56
HPS4-213ENST00000483631 FCHO1O14526 889 aa18.56■□□□□ 0.56
HPS4-213ENST00000483631 TBX6O95947 436 aaPredicted RBP18.56■□□□□ 0.56
HPS4-213ENST00000483631 S100BP04271 92 aaPredicted RBP18.56■□□□□ 0.56
HPS4-213ENST00000483631 TPP2P29144 1249 aaPredicted RBP18.56■□□□□ 0.56
HPS4-213ENST00000483631 CRABP2P29373 138 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms