RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 LMNTD2Q8IXW0 634 aa12.98□□□□□ -0.33
VARS-226ENST00000483275 PPIL6Q8IXY8 311 aa12.98□□□□□ -0.33
VARS-226ENST00000483275 CA13Q8N1Q1 262 aa12.98□□□□□ -0.33
VARS-226ENST00000483275 FAM47BQ8NA70 645 aa12.98□□□□□ -0.33
VARS-226ENST00000483275 APCDD1LQ8NCL9 501 aa12.98□□□□□ -0.33
VARS-226ENST00000483275 TMEM52Q8NDY8 209 aa12.98□□□□□ -0.33
VARS-226ENST00000483275 OR52N2Q8NGI0 321 aa12.98□□□□□ -0.33
VARS-226ENST00000483275 FAM57AQ8TBR7 257 aa12.98□□□□□ -0.33
VARS-226ENST00000483275 NRGNQ92686 78 aa12.98□□□□□ -0.33
VARS-226ENST00000483275 FBXL8Q96CD0 374 aa12.98□□□□□ -0.33
VARS-226ENST00000483275 CFAP36Q96G28 342 aa12.98□□□□□ -0.33
VARS-226ENST00000483275 HIST1H2AHQ96KK5 128 aa12.98□□□□□ -0.33
VARS-226ENST00000483275 PWWP2AQ96N64 755 aa12.98□□□□□ -0.33
VARS-226ENST00000483275 HIST1H2AJQ99878 128 aa12.98□□□□□ -0.33
VARS-226ENST00000483275 SPOCK3Q9BQ16 436 aa12.98□□□□□ -0.33
VARS-226ENST00000483275 H2AFJQ9BTM1 129 aa12.98□□□□□ -0.33
VARS-226ENST00000483275 SLC6A16Q9GZN6 736 aa12.98□□□□□ -0.33
VARS-226ENST00000483275 ENKD1Q9H0I2 346 aa12.98□□□□□ -0.33
VARS-226ENST00000483275 MCCC2Q9HCC0 563 aa12.98□□□□□ -0.33
VARS-226ENST00000483275 PPANQ9NQ55 473 aaKnown RBP12.98□□□□□ -0.33
VARS-226ENST00000483275 PRDM9Q9NQV7 894 aa12.98□□□□□ -0.33
VARS-226ENST00000483275 PNO1Q9NRX1 252 aaKnown RBP12.98□□□□□ -0.33
VARS-226ENST00000483275 DEPPQ9NTK1 212 aa12.98□□□□□ -0.33
VARS-226ENST00000483275 ZFATQ9P243 1243 aa12.98□□□□□ -0.33
VARS-226ENST00000483275 ZFP69BQ9UJL9 534 aa12.98□□□□□ -0.33
VARS-226ENST00000483275 NIPBLQ6KC79 2804 aaeCLIP12.98□□□□□ -0.33
VARS-226ENST00000483275 NCKAP5O14513 1909 aa12.98□□□□□ -0.33
VARS-226ENST00000483275 CDC7O00311 574 aa12.97□□□□□ -0.33
VARS-226ENST00000483275 FCHO1O14526 889 aa12.97□□□□□ -0.33
VARS-226ENST00000483275 ITGA10O75578 1167 aa12.97□□□□□ -0.33
VARS-226ENST00000483275 TFEBP19484 476 aa12.97□□□□□ -0.33
VARS-226ENST00000483275 SAT1P21673 171 aa12.97□□□□□ -0.33
VARS-226ENST00000483275 TRHRP34981 398 aaPredicted RBP12.97□□□□□ -0.33
VARS-226ENST00000483275 BTN3A2P78410 334 aa12.97□□□□□ -0.33
VARS-226ENST00000483275 CCZ1BP86790 482 aa12.97□□□□□ -0.33
VARS-226ENST00000483275 CCZ1P86791 482 aaPredicted RBP12.97□□□□□ -0.33
VARS-226ENST00000483275 CYP1B1Q16678 543 aa12.97□□□□□ -0.33
VARS-226ENST00000483275 BBS9Q3SYG4 887 aa12.97□□□□□ -0.33
VARS-226ENST00000483275 ADNP2Q6IQ32 1131 aa12.97□□□□□ -0.33
VARS-226ENST00000483275 TRMT10BQ6PF06 316 aaKnown RBP12.97□□□□□ -0.33
VARS-226ENST00000483275 SBSNQ6UWP8 590 aa12.97□□□□□ -0.33
VARS-226ENST00000483275 THOC6Q86W42 341 aaKnown RBP12.97□□□□□ -0.33
VARS-226ENST00000483275 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.97□□□□□ -0.33
VARS-226ENST00000483275 RASGEF1CQ8N431 466 aa12.97□□□□□ -0.33
VARS-226ENST00000483275 ACBD4Q8NC06 268 aa12.97□□□□□ -0.33
VARS-226ENST00000483275 NCLNQ969V3 563 aa12.97□□□□□ -0.33
VARS-226ENST00000483275 C14orf79Q96F83 325 aa12.97□□□□□ -0.33
VARS-226ENST00000483275 CERS2Q96G23 380 aa12.97□□□□□ -0.33
VARS-226ENST00000483275 WDR83Q9BRX9 315 aaKnown RBP12.97□□□□□ -0.33
VARS-226ENST00000483275 SARGQ9BW04 601 aa12.97□□□□□ -0.33
VARS-226ENST00000483275 FAM129AQ9BZQ8 928 aa12.97□□□□□ -0.33
VARS-226ENST00000483275 DEFB127Q9H1M4 99 aa12.97□□□□□ -0.33
VARS-226ENST00000483275 TRIM45Q9H8W5 580 aaPredicted RBP12.97□□□□□ -0.33
VARS-226ENST00000483275 COQ3Q9NZJ6 369 aa12.97□□□□□ -0.33
VARS-226ENST00000483275 KCMF1Q9P0J7 381 aa12.97□□□□□ -0.33
VARS-226ENST00000483275 TNFRSF10DQ9UBN6 386 aa12.97□□□□□ -0.33
VARS-226ENST00000483275 RNF6Q9Y252 685 aa12.97□□□□□ -0.33
VARS-226ENST00000483275 KLF13Q9Y2Y9 288 aaPredicted RBP12.97□□□□□ -0.33
VARS-226ENST00000483275 ACANP16112 2415 aa12.97□□□□□ -0.33
VARS-226ENST00000483275 HNRNPH1P31943 449 aaKnown RBP12.96□□□□□ -0.33
VARS-226ENST00000483275 AP1S2P56377 157 aa12.96□□□□□ -0.33
VARS-226ENST00000483275 SKP1P63208 163 aa12.96□□□□□ -0.33
VARS-226ENST00000483275 RUNX2Q13950 521 aa12.96□□□□□ -0.33
VARS-226ENST00000483275 PPP1R7Q15435 360 aa12.96□□□□□ -0.33
VARS-226ENST00000483275 PPP1R3AQ16821 1122 aa12.96□□□□□ -0.33
VARS-226ENST00000483275 ZNF662Q6ZS27 426 aa12.96□□□□□ -0.33
VARS-226ENST00000483275 CNTN4Q8IWV2 1026 aa12.96□□□□□ -0.33
VARS-226ENST00000483275 TBC1D19Q8N5T2 526 aa12.96□□□□□ -0.33
VARS-226ENST00000483275 TMEM156Q8N614 296 aa12.96□□□□□ -0.33
VARS-226ENST00000483275 B3GNT7Q8NFL0 401 aa12.96□□□□□ -0.33
VARS-226ENST00000483275 CREB3L4Q8TEY5 395 aa12.96□□□□□ -0.33
VARS-226ENST00000483275 CCT6BQ92526 530 aa12.96□□□□□ -0.33
VARS-226ENST00000483275 ASIC3Q9UHC3 531 aa12.96□□□□□ -0.33
VARS-226ENST00000483275 CHMP2BQ9UQN3 213 aa12.96□□□□□ -0.33
VARS-226ENST00000483275 SLC22A14Q9Y267 594 aa12.96□□□□□ -0.33
VARS-226ENST00000483275 PPP2R2CQ9Y2T4 447 aa12.96□□□□□ -0.33
VARS-226ENST00000483275 DYRK1BQ9Y463 629 aa12.96□□□□□ -0.33
VARS-226ENST00000483275 LIPGQ9Y5X9 500 aa12.96□□□□□ -0.33
VARS-226ENST00000483275 PSAT1Q9Y617 370 aa12.96□□□□□ -0.33
VARS-226ENST00000483275 PGRMC1O00264 195 aaKnown RBP12.95□□□□□ -0.34
VARS-226ENST00000483275 OR2J2O76002 312 aa12.95□□□□□ -0.34
VARS-226ENST00000483275 OR6B1O95007 311 aa12.95□□□□□ -0.34
VARS-226ENST00000483275 SMIM10L1P0DMW3 83 aa12.95□□□□□ -0.34
VARS-226ENST00000483275 AHRP35869 848 aa12.95□□□□□ -0.34
VARS-226ENST00000483275 GDF5P43026 501 aa12.95□□□□□ -0.34
VARS-226ENST00000483275 CLCN2P51788 898 aa12.95□□□□□ -0.34
VARS-226ENST00000483275 TFF3Q07654 80 aa12.95□□□□□ -0.34
VARS-226ENST00000483275 FBXO48Q5FWF7 155 aa12.95□□□□□ -0.34
VARS-226ENST00000483275 EMC4Q5J8M3 183 aa12.95□□□□□ -0.34
VARS-226ENST00000483275 SPANXN3Q5MJ09 141 aa12.95□□□□□ -0.34
VARS-226ENST00000483275 TEDDM1Q5T9Z0 273 aa12.95□□□□□ -0.34
VARS-226ENST00000483275 NXPE4Q6UWF7 544 aa12.95□□□□□ -0.34
VARS-226ENST00000483275 STRA8Q7Z7C7 330 aa12.95□□□□□ -0.34
VARS-226ENST00000483275 OR5M9Q8NGP3 310 aa12.95□□□□□ -0.34
VARS-226ENST00000483275 SMIM10Q96HG1 83 aa12.95□□□□□ -0.34
VARS-226ENST00000483275 SEC16BQ96JE7 1060 aa12.95□□□□□ -0.34
VARS-226ENST00000483275 CSF3RQ99062 836 aa12.95□□□□□ -0.34
VARS-226ENST00000483275 TREX2Q9BQ50 279 aaPredicted RBP12.95□□□□□ -0.34
VARS-226ENST00000483275 AIF1LQ9BQI0 150 aa12.95□□□□□ -0.34
VARS-226ENST00000483275 TRIM54Q9BYV2 358 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms