RNA–Protein interactions for RNA: ENST00000482596.1

CHD6-209, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best)

Gene CHD6, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-209ENST00000482596 TRIB1Q96RU8 372 aa5.9□□□□□ -1.46
CHD6-209ENST00000482596 SELENOSQ9BQE4 189 aa5.9□□□□□ -1.46
CHD6-209ENST00000482596 TUBGCP2Q9BSJ2 902 aa5.9□□□□□ -1.46
CHD6-209ENST00000482596 RAB11FIP5Q9BXF6 653 aa5.9□□□□□ -1.46
CHD6-209ENST00000482596 C1QTNF5Q9BXJ0 243 aa5.9□□□□□ -1.46
CHD6-209ENST00000482596 SLITRK2Q9H156 845 aa5.9□□□□□ -1.46
CHD6-209ENST00000482596 SLC6A15Q9H2J7 730 aa5.9□□□□□ -1.46
CHD6-209ENST00000482596 SSU72Q9NP77 194 aaKnown RBP5.9□□□□□ -1.46
CHD6-209ENST00000482596 LMBRD1Q9NUN5 540 aa5.9□□□□□ -1.46
CHD6-209ENST00000482596 ZC3H7BQ9UGR2 993 aaKnown RBP5.9□□□□□ -1.46
CHD6-209ENST00000482596 PCDHGB3Q9Y5G1 929 aa5.9□□□□□ -1.46
CHD6-209ENST00000482596 PCDHA13Q9Y5I0 950 aa5.9□□□□□ -1.46
CHD6-209ENST00000482596 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.9□□□□□ -1.46
CHD6-209ENST00000482596 DUSP10Q9Y6W6 482 aa5.9□□□□□ -1.46
CHD6-209ENST00000482596 LRRC14BA6NHZ5 514 aa5.89□□□□□ -1.47
CHD6-209ENST00000482596 ARHGAP42A6NI28 874 aa5.89□□□□□ -1.47
CHD6-209ENST00000482596 CCT8L1PA6NM43 557 aa5.89□□□□□ -1.47
CHD6-209ENST00000482596 AHRRA9YTQ3 701 aa5.89□□□□□ -1.47
CHD6-209ENST00000482596 DFFAO00273 331 aa5.89□□□□□ -1.47
CHD6-209ENST00000482596 NRP2O60462 931 aa5.89□□□□□ -1.47
CHD6-209ENST00000482596 HCN1O60741 890 aa5.89□□□□□ -1.47
CHD6-209ENST00000482596 ZNF354AO60765 605 aaPredicted RBP5.89□□□□□ -1.47
CHD6-209ENST00000482596 PPP1R3DO95685 299 aa5.89□□□□□ -1.47
CHD6-209ENST00000482596 PEX11BO96011 259 aa5.89□□□□□ -1.47
CHD6-209ENST00000482596 TPBGLP0DKB5 382 aa5.89□□□□□ -1.47
CHD6-209ENST00000482596 TPSB2P20231 275 aa5.89□□□□□ -1.47
CHD6-209ENST00000482596 GCH1P30793 250 aa5.89□□□□□ -1.47
CHD6-209ENST00000482596 PTPN9P43378 593 aa5.89□□□□□ -1.47
CHD6-209ENST00000482596 CCT5P48643 541 aa5.89□□□□□ -1.47
CHD6-209ENST00000482596 TRPC1P48995 793 aa5.89□□□□□ -1.47
CHD6-209ENST00000482596 SLC26A5P58743 744 aa5.89□□□□□ -1.47
CHD6-209ENST00000482596 DSCR9P59020 149 aa5.89□□□□□ -1.47
CHD6-209ENST00000482596 MAT1AQ00266 395 aaKnown RBP5.89□□□□□ -1.47
CHD6-209ENST00000482596 IL10RBQ08334 325 aa5.89□□□□□ -1.47
CHD6-209ENST00000482596 AP1B1Q10567 949 aa5.89□□□□□ -1.47
CHD6-209ENST00000482596 CDK5R2Q13319 367 aa5.89□□□□□ -1.47
CHD6-209ENST00000482596 KLF1Q13351 362 aaPredicted RBP5.89□□□□□ -1.47
CHD6-209ENST00000482596 TPSAB1Q15661 275 aa5.89□□□□□ -1.47
CHD6-209ENST00000482596 TPD52L1Q16890 204 aaPredicted RBP5.89□□□□□ -1.47
CHD6-209ENST00000482596 PGGHGQ32M88 737 aa5.89□□□□□ -1.47
CHD6-209ENST00000482596 ATP13A5Q4VNC0 1218 aa5.89□□□□□ -1.47
CHD6-209ENST00000482596 ANKRD20A8PQ5CZ79 823 aa5.89□□□□□ -1.47
CHD6-209ENST00000482596 BEX5Q5H9J7 111 aa5.89□□□□□ -1.47
CHD6-209ENST00000482596 TCTE1Q5JU00 501 aa5.89□□□□□ -1.47
CHD6-209ENST00000482596 KPRPQ5T749 579 aaPredicted RBP5.89□□□□□ -1.47
CHD6-209ENST00000482596 NDUFAF5Q5TEU4 345 aa5.89□□□□□ -1.47
CHD6-209ENST00000482596 MFSD4BQ5TF39 518 aa5.89□□□□□ -1.47
CHD6-209ENST00000482596 USP43Q70EL4 1123 aa5.89□□□□□ -1.47
CHD6-209ENST00000482596 CILP2Q8IUL8 1156 aa5.89□□□□□ -1.47
CHD6-209ENST00000482596 NKAPQ8N5F7 415 aaKnown RBP5.89□□□□□ -1.47
CHD6-209ENST00000482596 CELF2-AS1Q8N7Q2 184 aa5.89□□□□□ -1.47
CHD6-209ENST00000482596 LPCAT1Q8NF37 534 aa5.89□□□□□ -1.47
CHD6-209ENST00000482596 SLC44A1Q8WWI5 657 aa5.89□□□□□ -1.47
CHD6-209ENST00000482596 PROX1Q92786 737 aa5.89□□□□□ -1.47
CHD6-209ENST00000482596 UBE2FQ969M7 185 aa5.89□□□□□ -1.47
CHD6-209ENST00000482596 FBXW5Q969U6 566 aa5.89□□□□□ -1.47
CHD6-209ENST00000482596 SPATA13Q96N96 652 aa5.89□□□□□ -1.47
CHD6-209ENST00000482596 FAM111AQ96PZ2 611 aa5.89□□□□□ -1.47
CHD6-209ENST00000482596 LYSMD1Q96S90 227 aa5.89□□□□□ -1.47
CHD6-209ENST00000482596 MGME1Q9BQP7 344 aa5.89□□□□□ -1.47
CHD6-209ENST00000482596 FAM167BQ9BTA0 163 aa5.89□□□□□ -1.47
CHD6-209ENST00000482596 XPO4Q9C0E2 1151 aaKnown RBP5.89□□□□□ -1.47
CHD6-209ENST00000482596 SYNCQ9H7C4 482 aa5.89□□□□□ -1.47
CHD6-209ENST00000482596 MKKSQ9NPJ1 570 aaPredicted RBP5.89□□□□□ -1.47
CHD6-209ENST00000482596 SEMA4BQ9NPR2 832 aaPredicted RBP5.89□□□□□ -1.47
CHD6-209ENST00000482596 TMEM59LQ9UK28 342 aa5.89□□□□□ -1.47
CHD6-209ENST00000482596 CNTN6Q9UQ52 1028 aa5.89□□□□□ -1.47
CHD6-209ENST00000482596 B3GALT5Q9Y2C3 310 aa5.89□□□□□ -1.47
CHD6-209ENST00000482596 TTLL3Q9Y4R7 772 aa5.89□□□□□ -1.47
CHD6-209ENST00000482596 LOC105369274A0A096LPK9 316 aa5.88□□□□□ -1.47
CHD6-209ENST00000482596 IGHV4-61A0A0C4DH41 118 aa5.88□□□□□ -1.47
CHD6-209ENST00000482596 LOC102723532A0A0G2JNH3 316 aa5.88□□□□□ -1.47
CHD6-209ENST00000482596 A0A1W2PP18 115 aa5.88□□□□□ -1.47
CHD6-209ENST00000482596 RGSL1A5PLK6 1076 aa5.88□□□□□ -1.47
CHD6-209ENST00000482596 ISM1B1AKI9 464 aa5.88□□□□□ -1.47
CHD6-209ENST00000482596 CTSVO60911 334 aa5.88□□□□□ -1.47
CHD6-209ENST00000482596 TSPAN15O95858 294 aa5.88□□□□□ -1.47
CHD6-209ENST00000482596 SLC4A1P02730 911 aa5.88□□□□□ -1.47
CHD6-209ENST00000482596 ESR1P03372 595 aa5.88□□□□□ -1.47
CHD6-209ENST00000482596 TPM2P07951 284 aa5.88□□□□□ -1.47
CHD6-209ENST00000482596 CD48P09326 243 aa5.88□□□□□ -1.47
CHD6-209ENST00000482596 PTPN6P29350 595 aa5.88□□□□□ -1.47
CHD6-209ENST00000482596 UGT2B10P36537 528 aa5.88□□□□□ -1.47
CHD6-209ENST00000482596 CD79BP40259 229 aa5.88□□□□□ -1.47
CHD6-209ENST00000482596 SLC26A3P40879 764 aa5.88□□□□□ -1.47
CHD6-209ENST00000482596 SLCO1A2P46721 670 aa5.88□□□□□ -1.47
CHD6-209ENST00000482596 DNASE1L1P49184 302 aa5.88□□□□□ -1.47
CHD6-209ENST00000482596 UBA52P62987 128 aaKnown RBP5.88□□□□□ -1.47
CHD6-209ENST00000482596 IRX1P78414 480 aaPredicted RBP5.88□□□□□ -1.47
CHD6-209ENST00000482596 GCNT1Q02742 428 aa5.88□□□□□ -1.47
CHD6-209ENST00000482596 MAMLD1Q13495 774 aa5.88□□□□□ -1.47
CHD6-209ENST00000482596 USP10Q14694 798 aaKnown RBP5.88□□□□□ -1.47
CHD6-209ENST00000482596 P3H1Q32P28 736 aa5.88□□□□□ -1.47
CHD6-209ENST00000482596 DPCR1Q3MIW9 517 aa5.88□□□□□ -1.47
CHD6-209ENST00000482596 MINDY4Q4G0A6 757 aa5.88□□□□□ -1.47
CHD6-209ENST00000482596 SFT2D3Q587I9 215 aa5.88□□□□□ -1.47
CHD6-209ENST00000482596 FNBP1LQ5T0N5 605 aa5.88□□□□□ -1.47
CHD6-209ENST00000482596 PDPK2PQ6A1A2 396 aa5.88□□□□□ -1.47
CHD6-209ENST00000482596 SARM1Q6SZW1 724 aa5.88□□□□□ -1.47
CHD6-209ENST00000482596 C1orf122Q6ZSJ8 110 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms