RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 PLD5Q8N7P1 536 aa6.31□□□□□ -1.4
CLK1-212ENST00000482590 OR52M1Q8NGK5 317 aa6.31□□□□□ -1.4
CLK1-212ENST00000482590 ZFP28Q8NHY6 868 aa6.31□□□□□ -1.4
CLK1-212ENST00000482590 SLC35B2Q8TB61 432 aa6.31□□□□□ -1.4
CLK1-212ENST00000482590 BCL2L2Q92843 193 aaPredicted RBP6.31□□□□□ -1.4
CLK1-212ENST00000482590 SCAMP4Q969E2 229 aa6.31□□□□□ -1.4
CLK1-212ENST00000482590 SGF29Q96ES7 293 aa6.31□□□□□ -1.4
CLK1-212ENST00000482590 PPP1R16AQ96I34 528 aa6.31□□□□□ -1.4
CLK1-212ENST00000482590 REXO5Q96IC2 774 aaKnown RBP6.31□□□□□ -1.4
CLK1-212ENST00000482590 PIMREGQ9BSJ6 248 aa6.31□□□□□ -1.4
CLK1-212ENST00000482590 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.31□□□□□ -1.4
CLK1-212ENST00000482590 SLC7A5P2Q9GIP4 190 aa6.31□□□□□ -1.4
CLK1-212ENST00000482590 RIBC2Q9H4K1 309 aa6.31□□□□□ -1.4
CLK1-212ENST00000482590 COQ10BQ9H8M1 238 aa6.31□□□□□ -1.4
CLK1-212ENST00000482590 ASNSD1Q9NWL6 643 aa6.31□□□□□ -1.4
CLK1-212ENST00000482590 PSD3Q9NYI0 1048 aa6.31□□□□□ -1.4
CLK1-212ENST00000482590 MOCS1Q9NZB8 636 aa6.31□□□□□ -1.4
CLK1-212ENST00000482590 CYTH4Q9UIA0 394 aa6.31□□□□□ -1.4
CLK1-212ENST00000482590 MKLN1Q9UL63 735 aa6.31□□□□□ -1.4
CLK1-212ENST00000482590 STAP1Q9ULZ2 295 aa6.31□□□□□ -1.4
CLK1-212ENST00000482590 USP22Q9UPT9 525 aa6.31□□□□□ -1.4
CLK1-212ENST00000482590 ASXL3Q9C0F0 2248 aa6.31□□□□□ -1.4
CLK1-212ENST00000482590 ZFC3H1O60293 1989 aaKnown RBP6.31□□□□□ -1.4
CLK1-212ENST00000482590 SCN8AQ9UQD0 1980 aa6.31□□□□□ -1.4
CLK1-212ENST00000482590 COL6A6A6NMZ7 2263 aa6.3□□□□□ -1.4
CLK1-212ENST00000482590 XKRY2A2RUG3 117 aa6.3□□□□□ -1.4
CLK1-212ENST00000482590 A6NL46 340 aa6.3□□□□□ -1.4
CLK1-212ENST00000482590 PRAMEF26H0Y7S4 382 aa6.3□□□□□ -1.4
CLK1-212ENST00000482590 QSOX1O00391 747 aa6.3□□□□□ -1.4
CLK1-212ENST00000482590 KPNA3O00505 521 aaPredicted RBP6.3□□□□□ -1.4
CLK1-212ENST00000482590 SPRY1O43609 319 aaPredicted RBP6.3□□□□□ -1.4
CLK1-212ENST00000482590 LIASO43766 372 aa6.3□□□□□ -1.4
CLK1-212ENST00000482590 CYTIPO60759 359 aa6.3□□□□□ -1.4
CLK1-212ENST00000482590 AVILO75366 819 aa6.3□□□□□ -1.4
CLK1-212ENST00000482590 MTRF1O75570 445 aaKnown RBP6.3□□□□□ -1.4
CLK1-212ENST00000482590 PTBP3O95758 552 aaKnown RBP6.3□□□□□ -1.4
CLK1-212ENST00000482590 CHEK2O96017 543 aa6.3□□□□□ -1.4
CLK1-212ENST00000482590 PLGP00747 810 aaPredicted RBP6.3□□□□□ -1.4
CLK1-212ENST00000482590 IGLV2-14P01704 120 aa6.3□□□□□ -1.4
CLK1-212ENST00000482590 ERBB2P04626 1255 aa6.3□□□□□ -1.4
CLK1-212ENST00000482590 ELANEP08246 267 aa6.3□□□□□ -1.4
CLK1-212ENST00000482590 CYC1P08574 325 aa6.3□□□□□ -1.4
CLK1-212ENST00000482590 CKMT2P17540 419 aa6.3□□□□□ -1.4
CLK1-212ENST00000482590 IDUAP35475 653 aa6.3□□□□□ -1.4
CLK1-212ENST00000482590 SOAT1P35610 550 aa6.3□□□□□ -1.4
CLK1-212ENST00000482590 EIF2S3P41091 472 aaKnown RBP6.3□□□□□ -1.4
CLK1-212ENST00000482590 METAP1P53582 386 aa6.3□□□□□ -1.4
CLK1-212ENST00000482590 CDH4P55283 916 aa6.3□□□□□ -1.4
CLK1-212ENST00000482590 FAM3BP58499 235 aaPredicted RBP6.3□□□□□ -1.4
CLK1-212ENST00000482590 ZBTB17Q13105 803 aa6.3□□□□□ -1.4
CLK1-212ENST00000482590 SHBQ15464 509 aa6.3□□□□□ -1.4
CLK1-212ENST00000482590 SFMBT2Q5VUG0 894 aa6.3□□□□□ -1.4
CLK1-212ENST00000482590 SP5Q6BEB4 398 aaPredicted RBP6.3□□□□□ -1.4
CLK1-212ENST00000482590 TMEM81Q6P7N7 255 aa6.3□□□□□ -1.4
CLK1-212ENST00000482590 C11orf57Q6ZUT1 292 aaPredicted RBP6.3□□□□□ -1.4
CLK1-212ENST00000482590 FAM183BPQ6ZVS7 135 aa6.3□□□□□ -1.4
CLK1-212ENST00000482590 SLC46A3Q7Z3Q1 461 aa6.3□□□□□ -1.4
CLK1-212ENST00000482590 PPP1R32Q7Z5V6 425 aa6.3□□□□□ -1.4
CLK1-212ENST00000482590 CAMKMTQ7Z624 323 aa6.3□□□□□ -1.4
CLK1-212ENST00000482590 RFX6Q8HWS3 928 aa6.3□□□□□ -1.4
CLK1-212ENST00000482590 KLHL7Q8IXQ5 586 aa6.3□□□□□ -1.4
CLK1-212ENST00000482590 FAM46DQ8NEK8 389 aa6.3□□□□□ -1.4
CLK1-212ENST00000482590 OR56A1Q8NGH5 318 aa6.3□□□□□ -1.4
CLK1-212ENST00000482590 THRSPQ92748 146 aa6.3□□□□□ -1.4
CLK1-212ENST00000482590 FAM131CQ96AQ9 280 aa6.3□□□□□ -1.4
CLK1-212ENST00000482590 ARRDC3Q96B67 414 aa6.3□□□□□ -1.4
CLK1-212ENST00000482590 TMEM186Q96B77 213 aa6.3□□□□□ -1.4
CLK1-212ENST00000482590 PTERQ96BW5 349 aa6.3□□□□□ -1.4
CLK1-212ENST00000482590 CPXM1Q96SM3 734 aa6.3□□□□□ -1.4
CLK1-212ENST00000482590 PRMT1Q99873 361 aaKnown RBP6.3□□□□□ -1.4
CLK1-212ENST00000482590 CALN1Q9BXU9 219 aa6.3□□□□□ -1.4
CLK1-212ENST00000482590 SIK2Q9H0K1 926 aa6.3□□□□□ -1.4
CLK1-212ENST00000482590 STMN4Q9H169 189 aaPredicted RBP6.3□□□□□ -1.4
CLK1-212ENST00000482590 WNT5BQ9H1J7 359 aa6.3□□□□□ -1.4
CLK1-212ENST00000482590 SYTL2Q9HCH5 934 aa6.3□□□□□ -1.4
CLK1-212ENST00000482590 CENPMQ9NSP4 180 aa6.3□□□□□ -1.4
CLK1-212ENST00000482590 ARHGEF38Q9NXL2 777 aa6.3□□□□□ -1.4
CLK1-212ENST00000482590 OGFRQ9NZT2 677 aa6.3□□□□□ -1.4
CLK1-212ENST00000482590 TRPC4Q9UBN4 977 aa6.3□□□□□ -1.4
CLK1-212ENST00000482590 TDRKHQ9Y2W6 561 aaKnown RBP6.3□□□□□ -1.4
CLK1-212ENST00000482590 SETXQ7Z333 2677 aaKnown RBP6.3□□□□□ -1.4
CLK1-212ENST00000482590 KALRNO60229 2985 aa6.3□□□□□ -1.4
CLK1-212ENST00000482590 A0A1B0GWJ7 208 aa6.29□□□□□ -1.4
CLK1-212ENST00000482590 EME2A4GXA9 379 aaPredicted RBP6.29□□□□□ -1.4
CLK1-212ENST00000482590 BECN2A8MW95 431 aa6.29□□□□□ -1.4
CLK1-212ENST00000482590 KRTAP29-1A8MX34 341 aaPredicted RBP6.29□□□□□ -1.4
CLK1-212ENST00000482590 M0QYT0 321 aa6.29□□□□□ -1.4
CLK1-212ENST00000482590 SLC31A1O15431 190 aa6.29□□□□□ -1.4
CLK1-212ENST00000482590 TLX3O43711 291 aaPredicted RBP6.29□□□□□ -1.4
CLK1-212ENST00000482590 GMFGO60234 142 aa6.29□□□□□ -1.4
CLK1-212ENST00000482590 AKR7A3O95154 331 aa6.29□□□□□ -1.4
CLK1-212ENST00000482590 GBAP04062 536 aa6.29□□□□□ -1.4
CLK1-212ENST00000482590 HNRNPA2B1P22626 353 aaKnown RBP6.29□□□□□ -1.4
CLK1-212ENST00000482590 ACP1P24666 158 aa6.29□□□□□ -1.4
CLK1-212ENST00000482590 ITPKBP27987 946 aa6.29□□□□□ -1.4
CLK1-212ENST00000482590 AKT2P31751 481 aa6.29□□□□□ -1.4
CLK1-212ENST00000482590 CENPAP49450 140 aa6.29□□□□□ -1.4
CLK1-212ENST00000482590 E2F1Q01094 437 aa6.29□□□□□ -1.4
CLK1-212ENST00000482590 RELQ04864 619 aaPredicted RBP6.29□□□□□ -1.4
CLK1-212ENST00000482590 EIF4EBP2Q13542 120 aaPredicted RBP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms