RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 LRRTM2O43300 516 aa12.21□□□□□ -0.45
VPS52-218ENST00000482399 CATP04040 527 aaKnown RBP12.21□□□□□ -0.45
VPS52-218ENST00000482399 EIF2S1P05198 315 aaKnown RBP12.21□□□□□ -0.45
VPS52-218ENST00000482399 ALPPL2P10696 532 aa12.21□□□□□ -0.45
VPS52-218ENST00000482399 RPS19P39019 145 aaKnown RBP12.21□□□□□ -0.45
VPS52-218ENST00000482399 HBA1P69905 142 aa12.21□□□□□ -0.45
VPS52-218ENST00000482399 KCNC4Q03721 635 aa12.21□□□□□ -0.45
VPS52-218ENST00000482399 SPHARQ15513 63 aa12.21□□□□□ -0.45
VPS52-218ENST00000482399 AGTRAPQ6RW13 159 aa12.21□□□□□ -0.45
VPS52-218ENST00000482399 TMIGD1Q6UXZ0 262 aa12.21□□□□□ -0.45
VPS52-218ENST00000482399 OTOP2Q7RTS6 562 aa12.21□□□□□ -0.45
VPS52-218ENST00000482399 ELMOD1Q8N336 334 aa12.21□□□□□ -0.45
VPS52-218ENST00000482399 POLR2J3Q9H1A7 115 aaKnown RBP12.21□□□□□ -0.45
VPS52-218ENST00000482399 ATP6V1HQ9UI12 483 aa12.21□□□□□ -0.45
VPS52-218ENST00000482399 SLC13A4Q9UKG4 626 aa12.21□□□□□ -0.45
VPS52-218ENST00000482399 RIMKLBQ9ULI2 386 aa12.21□□□□□ -0.45
VPS52-218ENST00000482399 NEUROG3Q9Y4Z2 214 aa12.21□□□□□ -0.45
VPS52-218ENST00000482399 HSPB11Q9Y547 144 aa12.21□□□□□ -0.45
VPS52-218ENST00000482399 MYLKQ15746 1914 aa12.21□□□□□ -0.46
VPS52-218ENST00000482399 CCDC88CQ9P219 2028 aa12.21□□□□□ -0.46
VPS52-218ENST00000482399 TRIM64BA6NI03 449 aa12.21□□□□□ -0.46
VPS52-218ENST00000482399 RTCAO00442 366 aaKnown RBP12.21□□□□□ -0.46
VPS52-218ENST00000482399 PRKAR2AP13861 404 aaKnown RBP12.21□□□□□ -0.46
VPS52-218ENST00000482399 ITGA2P17301 1181 aa12.21□□□□□ -0.46
VPS52-218ENST00000482399 AOAHP28039 575 aa12.21□□□□□ -0.46
VPS52-218ENST00000482399 HTR2BP41595 481 aa12.21□□□□□ -0.46
VPS52-218ENST00000482399 CTSOP43234 321 aaPredicted RBP12.21□□□□□ -0.46
VPS52-218ENST00000482399 AP1S1P61966 158 aa12.21□□□□□ -0.46
VPS52-218ENST00000482399 SDE2Q6IQ49 451 aa12.21□□□□□ -0.46
VPS52-218ENST00000482399 Q6ZVU0 165 aa12.21□□□□□ -0.46
VPS52-218ENST00000482399 ASB18Q6ZVZ8 466 aa12.21□□□□□ -0.46
VPS52-218ENST00000482399 GLCCI1Q86VQ1 547 aa12.21□□□□□ -0.46
VPS52-218ENST00000482399 TIGD4Q8IY51 512 aa12.21□□□□□ -0.46
VPS52-218ENST00000482399 TRPV1Q8NER1 839 aa12.21□□□□□ -0.46
VPS52-218ENST00000482399 HUS1BQ8NHY5 278 aa12.21□□□□□ -0.46
VPS52-218ENST00000482399 TP53INP1Q96A56 240 aa12.21□□□□□ -0.46
VPS52-218ENST00000482399 EXOSC8Q96B26 276 aaKnown RBP12.21□□□□□ -0.46
VPS52-218ENST00000482399 OR2B2Q9GZK3 357 aa12.21□□□□□ -0.46
VPS52-218ENST00000482399 CCDC177Q9NQR7 707 aaPredicted RBP12.21□□□□□ -0.46
VPS52-218ENST00000482399 SEMA3GQ9NS98 782 aa12.21□□□□□ -0.46
VPS52-218ENST00000482399 FAM120CQ9NX05 1096 aaKnown RBP12.21□□□□□ -0.46
VPS52-218ENST00000482399 LHX3Q9UBR4 397 aa12.21□□□□□ -0.46
VPS52-218ENST00000482399 GABRQQ9UN88 632 aa12.21□□□□□ -0.46
VPS52-218ENST00000482399 HCN4Q9Y3Q4 1203 aa12.21□□□□□ -0.46
VPS52-218ENST00000482399 A0A1W2PQL4 384 aaPredicted RBP12.2□□□□□ -0.46
VPS52-218ENST00000482399 H7C4K7 107 aa12.2□□□□□ -0.46
VPS52-218ENST00000482399 SYN3O14994 580 aa12.2□□□□□ -0.46
VPS52-218ENST00000482399 SLC16A8O95907 504 aa12.2□□□□□ -0.46
VPS52-218ENST00000482399 IFNA14P01570 189 aa12.2□□□□□ -0.46
VPS52-218ENST00000482399 MYL9P24844 172 aa12.2□□□□□ -0.46
VPS52-218ENST00000482399 CSNK2BP67870 215 aa12.2□□□□□ -0.46
VPS52-218ENST00000482399 SNAPC1Q16533 368 aa12.2□□□□□ -0.46
VPS52-218ENST00000482399 BAK1Q16611 211 aa12.2□□□□□ -0.46
VPS52-218ENST00000482399 ZNF284Q2VY69 593 aa12.2□□□□□ -0.46
VPS52-218ENST00000482399 CXorf57Q6NSI4 855 aaKnown RBP12.2□□□□□ -0.46
VPS52-218ENST00000482399 TUBA3EQ6PEY2 450 aa12.2□□□□□ -0.46
VPS52-218ENST00000482399 PCNPQ8WW12 178 aaKnown RBP12.2□□□□□ -0.46
VPS52-218ENST00000482399 ASZ1Q8WWH4 475 aa12.2□□□□□ -0.46
VPS52-218ENST00000482399 USP7Q93009 1102 aa12.2□□□□□ -0.46
VPS52-218ENST00000482399 ARMC5Q96C12 935 aa12.2□□□□□ -0.46
VPS52-218ENST00000482399 MTG2Q9H4K7 406 aa12.2□□□□□ -0.46
VPS52-218ENST00000482399 TRIM45Q9H8W5 580 aaPredicted RBP12.2□□□□□ -0.46
VPS52-218ENST00000482399 CFAP97Q9P2B7 532 aa12.2□□□□□ -0.46
VPS52-218ENST00000482399 SNX7Q9UNH6 387 aa12.2□□□□□ -0.46
VPS52-218ENST00000482399 CKAP5Q14008 2032 aa12.2□□□□□ -0.46
VPS52-218ENST00000482399 PIPSLA2A3N6 862 aa12.2□□□□□ -0.46
VPS52-218ENST00000482399 AOC2O75106 756 aa12.2□□□□□ -0.46
VPS52-218ENST00000482399 GPX5O75715 221 aa12.2□□□□□ -0.46
VPS52-218ENST00000482399 CD72P21854 359 aa12.2□□□□□ -0.46
VPS52-218ENST00000482399 CCND3P30281 292 aaPredicted RBP12.2□□□□□ -0.46
VPS52-218ENST00000482399 MANFP55145 182 aaKnown RBP12.2□□□□□ -0.46
VPS52-218ENST00000482399 SELENOWP63302 87 aa12.2□□□□□ -0.46
VPS52-218ENST00000482399 FBXO43Q4G163 708 aa12.2□□□□□ -0.46
VPS52-218ENST00000482399 LRIF1Q5T3J3 769 aa12.2□□□□□ -0.46
VPS52-218ENST00000482399 ANXA8L1Q5VT79 327 aa12.2□□□□□ -0.46
VPS52-218ENST00000482399 KRT74Q7RTS7 529 aa12.2□□□□□ -0.46
VPS52-218ENST00000482399 CALHM3Q86XJ0 350 aa12.2□□□□□ -0.46
VPS52-218ENST00000482399 ZNF566Q969W8 418 aa12.2□□□□□ -0.46
VPS52-218ENST00000482399 TADA1Q96BN2 335 aa12.2□□□□□ -0.46
VPS52-218ENST00000482399 BCL7BQ9BQE9 202 aa12.2□□□□□ -0.46
VPS52-218ENST00000482399 NLNQ9BYT8 704 aa12.2□□□□□ -0.46
VPS52-218ENST00000482399 NLKQ9UBE8 527 aa12.2□□□□□ -0.46
VPS52-218ENST00000482399 B4GALT6Q9UBX8 382 aa12.2□□□□□ -0.46
VPS52-218ENST00000482399 GPR52Q9Y2T5 361 aa12.2□□□□□ -0.46
VPS52-218ENST00000482399 YARS2Q9Y2Z4 477 aaKnown RBP12.2□□□□□ -0.46
VPS52-218ENST00000482399 PCDHGB1Q9Y5G3 927 aa12.2□□□□□ -0.46
VPS52-218ENST00000482399 PARP14Q460N5 1801 aa12.19□□□□□ -0.46
VPS52-218ENST00000482399 ETHE1O95571 254 aa12.19□□□□□ -0.46
VPS52-218ENST00000482399 GASTP01350 101 aa12.19□□□□□ -0.46
VPS52-218ENST00000482399 CYP17A1P05093 508 aa12.19□□□□□ -0.46
VPS52-218ENST00000482399 IL7P13232 177 aa12.19□□□□□ -0.46
VPS52-218ENST00000482399 SDHBP21912 280 aa12.19□□□□□ -0.46
VPS52-218ENST00000482399 MLLT1Q03111 559 aaPredicted RBP12.19□□□□□ -0.46
VPS52-218ENST00000482399 SLBPQ14493 270 aaKnown RBP eCLIP12.19□□□□□ -0.46
VPS52-218ENST00000482399 TEAD4Q15561 434 aa12.19□□□□□ -0.46
VPS52-218ENST00000482399 FXNQ16595 210 aa12.19□□□□□ -0.46
VPS52-218ENST00000482399 TJAP1Q5JTD0 557 aa12.19□□□□□ -0.46
VPS52-218ENST00000482399 ATAT1Q5SQI0 421 aa12.19□□□□□ -0.46
VPS52-218ENST00000482399 DCST1Q5T197 706 aa12.19□□□□□ -0.46
VPS52-218ENST00000482399 CRTC1Q6UUV9 634 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms