RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 LGALS12Q96DT0 336 aa10.89□□□□□ -0.67
SMPD4-218ENST00000482171 COL21A1Q96P44 957 aa10.89□□□□□ -0.67
SMPD4-218ENST00000482171 CABIN1Q9Y6J0 2220 aa10.89□□□□□ -0.67
SMPD4-218ENST00000482171 ZNF860A6NHJ4 632 aa10.89□□□□□ -0.67
SMPD4-218ENST00000482171 H0YAE9 185 aa10.89□□□□□ -0.67
SMPD4-218ENST00000482171 TSPAN4O14817 238 aa10.89□□□□□ -0.67
SMPD4-218ENST00000482171 SSNA1O43805 119 aa10.89□□□□□ -0.67
SMPD4-218ENST00000482171 CCNDBP1O95273 360 aa10.89□□□□□ -0.67
SMPD4-218ENST00000482171 C9P02748 559 aa10.89□□□□□ -0.67
SMPD4-218ENST00000482171 PNLIPRP1P54315 467 aa10.89□□□□□ -0.67
SMPD4-218ENST00000482171 OR4D2P58180 307 aa10.89□□□□□ -0.67
SMPD4-218ENST00000482171 MPP7Q5T2T1 576 aa10.89□□□□□ -0.67
SMPD4-218ENST00000482171 CCSAPQ6IQ19 270 aaPredicted RBP10.89□□□□□ -0.67
SMPD4-218ENST00000482171 CCBE1Q6UXH8 406 aaPredicted RBP10.89□□□□□ -0.67
SMPD4-218ENST00000482171 ZNF517Q6ZMY9 492 aaPredicted RBP10.89□□□□□ -0.67
SMPD4-218ENST00000482171 SPPL3Q8TCT6 385 aa10.89□□□□□ -0.67
SMPD4-218ENST00000482171 LKAAEAR1Q8TD35 194 aa10.89□□□□□ -0.67
SMPD4-218ENST00000482171 RAB8BQ92930 207 aa10.89□□□□□ -0.67
SMPD4-218ENST00000482171 FOXJ1Q92949 421 aa10.89□□□□□ -0.67
SMPD4-218ENST00000482171 ZBED6CLQ96FA7 236 aaPredicted RBP10.89□□□□□ -0.67
SMPD4-218ENST00000482171 SLC38A3Q99624 504 aa10.89□□□□□ -0.67
SMPD4-218ENST00000482171 TMEM246Q9BRR3 403 aa10.89□□□□□ -0.67
SMPD4-218ENST00000482171 PCBD2Q9H0N5 130 aa10.89□□□□□ -0.67
SMPD4-218ENST00000482171 PAK1IP1Q9NWT1 392 aaPredicted RBP10.89□□□□□ -0.67
SMPD4-218ENST00000482171 SAGE1Q9NXZ1 904 aa10.89□□□□□ -0.67
SMPD4-218ENST00000482171 NKIRAS2Q9NYR9 191 aa10.89□□□□□ -0.67
SMPD4-218ENST00000482171 ZNF282Q9UDV7 671 aaPredicted RBP10.89□□□□□ -0.67
SMPD4-218ENST00000482171 SNX7Q9UNH6 387 aa10.89□□□□□ -0.67
SMPD4-218ENST00000482171 ERVK-11Q9UQG0 969 aa10.89□□□□□ -0.67
SMPD4-218ENST00000482171 CREG1O75629 220 aa10.89□□□□□ -0.67
SMPD4-218ENST00000482171 UGT2B17O75795 530 aa10.89□□□□□ -0.67
SMPD4-218ENST00000482171 CSF2P04141 144 aa10.89□□□□□ -0.67
SMPD4-218ENST00000482171 ATF4P18848 351 aaPredicted RBP10.89□□□□□ -0.67
SMPD4-218ENST00000482171 OXTRP30559 389 aa10.89□□□□□ -0.67
SMPD4-218ENST00000482171 RGS8P57771 180 aaPredicted RBP10.89□□□□□ -0.67
SMPD4-218ENST00000482171 DUS1LQ6P1R4 473 aaKnown RBP10.89□□□□□ -0.67
SMPD4-218ENST00000482171 POMZP3Q6PJE2 187 aa10.89□□□□□ -0.67
SMPD4-218ENST00000482171 BLOC1S3Q6QNY0 202 aa10.89□□□□□ -0.67
SMPD4-218ENST00000482171 MFSD6LQ8IWD5 586 aa10.89□□□□□ -0.67
SMPD4-218ENST00000482171 DOK4Q8TEW6 326 aa10.89□□□□□ -0.67
SMPD4-218ENST00000482171 DNASE1L2Q92874 299 aa10.89□□□□□ -0.67
SMPD4-218ENST00000482171 RHBDF1Q96CC6 855 aa10.89□□□□□ -0.67
SMPD4-218ENST00000482171 CMTM7Q96FZ5 175 aa10.89□□□□□ -0.67
SMPD4-218ENST00000482171 Q96MT0 163 aa10.89□□□□□ -0.67
SMPD4-218ENST00000482171 KCNC2Q96PR1 638 aa10.89□□□□□ -0.67
SMPD4-218ENST00000482171 C14orf119Q9NWQ9 140 aa10.89□□□□□ -0.67
SMPD4-218ENST00000482171 GMPR2Q9P2T1 348 aaKnown RBP10.89□□□□□ -0.67
SMPD4-218ENST00000482171 FABP12A6NFH5 140 aa10.88□□□□□ -0.67
SMPD4-218ENST00000482171 MMP2P08253 660 aa10.88□□□□□ -0.67
SMPD4-218ENST00000482171 IFNGR2P38484 337 aa10.88□□□□□ -0.67
SMPD4-218ENST00000482171 GALNT1Q10472 559 aaPredicted RBP10.88□□□□□ -0.67
SMPD4-218ENST00000482171 SPIN4Q56A73 249 aa10.88□□□□□ -0.67
SMPD4-218ENST00000482171 RNASE12Q5GAN4 147 aaKnown RBP10.88□□□□□ -0.67
SMPD4-218ENST00000482171 HMGN2P46Q86SG4 172 aa10.88□□□□□ -0.67
SMPD4-218ENST00000482171 CLEC14AQ86T13 490 aa10.88□□□□□ -0.67
SMPD4-218ENST00000482171 GPR135Q8IZ08 494 aa10.88□□□□□ -0.67
SMPD4-218ENST00000482171 TSPEARQ8WU66 669 aa10.88□□□□□ -0.67
SMPD4-218ENST00000482171 PKP4Q99569 1192 aa10.88□□□□□ -0.67
SMPD4-218ENST00000482171 OLAHQ9NV23 265 aa10.88□□□□□ -0.67
SMPD4-218ENST00000482171 PTGFRNQ9P2B2 879 aa10.88□□□□□ -0.67
SMPD4-218ENST00000482171 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.88□□□□□ -0.67
SMPD4-218ENST00000482171 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.88□□□□□ -0.67
SMPD4-218ENST00000482171 FEZF1A0PJY2 475 aa10.88□□□□□ -0.67
SMPD4-218ENST00000482171 LINC01553A4QN01 128 aa10.88□□□□□ -0.67
SMPD4-218ENST00000482171 E7EQ34 232 aa10.88□□□□□ -0.67
SMPD4-218ENST00000482171 PTX3P26022 381 aaPredicted RBP10.88□□□□□ -0.67
SMPD4-218ENST00000482171 ID2Q02363 134 aa10.88□□□□□ -0.67
SMPD4-218ENST00000482171 SP140Q13342 867 aa10.88□□□□□ -0.67
SMPD4-218ENST00000482171 GNA13Q14344 377 aa10.88□□□□□ -0.67
SMPD4-218ENST00000482171 DUOXA1Q1HG43 343 aa10.88□□□□□ -0.67
SMPD4-218ENST00000482171 SPATS1Q496A3 300 aa10.88□□□□□ -0.67
SMPD4-218ENST00000482171 PAGE3Q5JUK9 113 aa10.88□□□□□ -0.67
SMPD4-218ENST00000482171 LIPIQ6XZB0 460 aa10.88□□□□□ -0.67
SMPD4-218ENST00000482171 PLEKHG7Q6ZR37 379 aa10.88□□□□□ -0.67
SMPD4-218ENST00000482171 LSMEM2Q8N112 164 aa10.88□□□□□ -0.67
SMPD4-218ENST00000482171 ASCC1Q8N9N2 400 aaKnown RBP10.88□□□□□ -0.67
SMPD4-218ENST00000482171 OR2A12Q8NGT7 310 aa10.88□□□□□ -0.67
SMPD4-218ENST00000482171 TADA1Q96BN2 335 aa10.88□□□□□ -0.67
SMPD4-218ENST00000482171 SLC35G5Q96KT7 338 aa10.88□□□□□ -0.67
SMPD4-218ENST00000482171 UBXN10Q96LJ8 280 aa10.88□□□□□ -0.67
SMPD4-218ENST00000482171 TRNT1Q96Q11 434 aaKnown RBP10.88□□□□□ -0.67
SMPD4-218ENST00000482171 PHOX2BQ99453 314 aa10.88□□□□□ -0.67
SMPD4-218ENST00000482171 ITPAQ9BY32 194 aa10.88□□□□□ -0.67
SMPD4-218ENST00000482171 DZANK1Q9NVP4 752 aa10.88□□□□□ -0.67
SMPD4-218ENST00000482171 TRPS1Q9UHF7 1281 aa10.88□□□□□ -0.67
SMPD4-218ENST00000482171 TIMP2P16035 220 aa10.88□□□□□ -0.67
SMPD4-218ENST00000482171 ZNF26P17031 533 aaPredicted RBP10.88□□□□□ -0.67
SMPD4-218ENST00000482171 POLR2CP19387 275 aaPredicted RBP10.88□□□□□ -0.67
SMPD4-218ENST00000482171 PDHA2P29803 388 aa10.88□□□□□ -0.67
SMPD4-218ENST00000482171 STXBP1P61764 594 aaKnown RBP10.88□□□□□ -0.67
SMPD4-218ENST00000482171 ZXDBP98169 803 aa10.88□□□□□ -0.67
SMPD4-218ENST00000482171 MTAPQ13126 283 aa10.88□□□□□ -0.67
SMPD4-218ENST00000482171 SCARB2Q14108 478 aa10.88□□□□□ -0.67
SMPD4-218ENST00000482171 IFI44LQ53G44 452 aa10.88□□□□□ -0.67
SMPD4-218ENST00000482171 KANK2Q63ZY3 851 aa10.88□□□□□ -0.67
SMPD4-218ENST00000482171 CD300LGQ6UXG3 332 aa10.88□□□□□ -0.67
SMPD4-218ENST00000482171 Q6ZNX1 250 aa10.88□□□□□ -0.67
SMPD4-218ENST00000482171 LRRC20Q8TCA0 184 aa10.88□□□□□ -0.67
SMPD4-218ENST00000482171 DPH2Q9BQC3 489 aaPredicted RBP10.88□□□□□ -0.67
SMPD4-218ENST00000482171 UCKL1Q9NWZ5 548 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms