RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 ZNF600Q6ZNG1 722 aa11.05□□□□□ -0.64
HPS4-212ENST00000481910 CLYBLQ8N0X4 340 aa11.05□□□□□ -0.64
HPS4-212ENST00000481910 OR4N4Q8N0Y3 316 aa11.05□□□□□ -0.64
HPS4-212ENST00000481910 ZNF781Q8N8C0 355 aa11.05□□□□□ -0.64
HPS4-212ENST00000481910 MFSD9Q8NBP5 474 aa11.05□□□□□ -0.64
HPS4-212ENST00000481910 THAP11Q96EK4 314 aa11.05□□□□□ -0.64
HPS4-212ENST00000481910 FRG2BQ96QU4 278 aa11.05□□□□□ -0.64
HPS4-212ENST00000481910 OR6C1Q96RD1 312 aa11.05□□□□□ -0.64
HPS4-212ENST00000481910 MTERF1Q99551 399 aaKnown RBP11.05□□□□□ -0.64
HPS4-212ENST00000481910 SLC29A3Q9BZD2 475 aa11.05□□□□□ -0.64
HPS4-212ENST00000481910 NUF2Q9BZD4 464 aa11.05□□□□□ -0.64
HPS4-212ENST00000481910 B3GNT4Q9C0J1 378 aa11.05□□□□□ -0.64
HPS4-212ENST00000481910 SLCO1B3Q9NPD5 702 aa11.05□□□□□ -0.64
HPS4-212ENST00000481910 ZNF69Q9UC07 566 aa11.05□□□□□ -0.64
HPS4-212ENST00000481910 ZFP69BQ9UJL9 534 aa11.05□□□□□ -0.64
HPS4-212ENST00000481910 TRAF6Q9Y4K3 522 aa11.05□□□□□ -0.64
HPS4-212ENST00000481910 AP1M2Q9Y6Q5 423 aa11.05□□□□□ -0.64
HPS4-212ENST00000481910 PIEZO1Q92508 2521 aa11.05□□□□□ -0.64
HPS4-212ENST00000481910 FAM149AA5PLN7 773 aa11.05□□□□□ -0.64
HPS4-212ENST00000481910 TMEM233B4DJY2 109 aa11.05□□□□□ -0.64
HPS4-212ENST00000481910 TCP11X1B4DZS4 312 aa11.05□□□□□ -0.64
HPS4-212ENST00000481910 TMEM150CB9EJG8 249 aa11.05□□□□□ -0.64
HPS4-212ENST00000481910 H0YGG7 62 aa11.05□□□□□ -0.64
HPS4-212ENST00000481910 ULK1O75385 1050 aa11.05□□□□□ -0.64
HPS4-212ENST00000481910 CHEK2O96017 543 aa11.05□□□□□ -0.64
HPS4-212ENST00000481910 KRT6AP02538 564 aa11.05□□□□□ -0.64
HPS4-212ENST00000481910 KRT6BP04259 564 aa11.05□□□□□ -0.64
HPS4-212ENST00000481910 SERPIND1P05546 499 aa11.05□□□□□ -0.64
HPS4-212ENST00000481910 GSTT2P0CG29 244 aa11.05□□□□□ -0.64
HPS4-212ENST00000481910 GSTT2BP0CG30 244 aa11.05□□□□□ -0.64
HPS4-212ENST00000481910 SPTBP11277 2137 aa11.05□□□□□ -0.64
HPS4-212ENST00000481910 M6PRP20645 277 aa11.05□□□□□ -0.64
HPS4-212ENST00000481910 PSMA4P25789 261 aaKnown RBP11.05□□□□□ -0.64
HPS4-212ENST00000481910 GABRA4P48169 554 aa11.05□□□□□ -0.64
HPS4-212ENST00000481910 KRT6CP48668 564 aa11.05□□□□□ -0.64
HPS4-212ENST00000481910 VSX2P58304 361 aaPredicted RBP11.05□□□□□ -0.64
HPS4-212ENST00000481910 ARF3P61204 181 aaPredicted RBP11.05□□□□□ -0.64
HPS4-212ENST00000481910 CYP4F2P78329 520 aa11.05□□□□□ -0.64
HPS4-212ENST00000481910 ACY1Q03154 408 aa11.05□□□□□ -0.64
HPS4-212ENST00000481910 TARDBPQ13148 414 aaKnown RBP eCLIP11.05□□□□□ -0.64
HPS4-212ENST00000481910 TUBB3Q13509 450 aa11.05□□□□□ -0.64
HPS4-212ENST00000481910 PUM1Q14671 1186 aaKnown RBP eCLIP11.05□□□□□ -0.64
HPS4-212ENST00000481910 SGO1Q5FBB7 561 aa11.05□□□□□ -0.64
HPS4-212ENST00000481910 TCHHL1Q5QJ38 904 aaPredicted RBP11.05□□□□□ -0.64
HPS4-212ENST00000481910 METTL11BQ5VVY1 283 aa11.05□□□□□ -0.64
HPS4-212ENST00000481910 ADNP2Q6IQ32 1131 aa11.05□□□□□ -0.64
HPS4-212ENST00000481910 RGS9BPQ6ZS82 235 aa11.05□□□□□ -0.64
HPS4-212ENST00000481910 FAM47EQ6ZV65 393 aa11.05□□□□□ -0.64
HPS4-212ENST00000481910 RAB11FIP2Q7L804 512 aa11.05□□□□□ -0.64
HPS4-212ENST00000481910 SLC51BQ86UW2 128 aa11.05□□□□□ -0.64
HPS4-212ENST00000481910 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.05□□□□□ -0.64
HPS4-212ENST00000481910 TRPV3Q8NET8 790 aa11.05□□□□□ -0.64
HPS4-212ENST00000481910 TTLQ8NG68 377 aa11.05□□□□□ -0.64
HPS4-212ENST00000481910 HUS1BQ8NHY5 278 aa11.05□□□□□ -0.64
HPS4-212ENST00000481910 SLC13A3Q8WWT9 602 aa11.05□□□□□ -0.64
HPS4-212ENST00000481910 SELENOMQ8WWX9 145 aa11.05□□□□□ -0.64
HPS4-212ENST00000481910 CCT6BQ92526 530 aa11.05□□□□□ -0.64
HPS4-212ENST00000481910 LIN37Q96GY3 246 aaPredicted RBP11.05□□□□□ -0.64
HPS4-212ENST00000481910 NDEL1Q9GZM8 345 aa11.05□□□□□ -0.64
HPS4-212ENST00000481910 SYNPO2LQ9H987 977 aa11.05□□□□□ -0.64
HPS4-212ENST00000481910 FANCEQ9HB96 536 aa11.05□□□□□ -0.64
HPS4-212ENST00000481910 FARSBQ9NSD9 589 aaKnown RBP11.05□□□□□ -0.64
HPS4-212ENST00000481910 RHBDL2Q9NX52 303 aa11.05□□□□□ -0.64
HPS4-212ENST00000481910 SERTAD3Q9UJW9 196 aa11.05□□□□□ -0.64
HPS4-212ENST00000481910 COMMD3-BMI1R4GMX3 469 aa11.05□□□□□ -0.64
HPS4-212ENST00000481910 PRSS47A8MTI9 375 aa11.04□□□□□ -0.64
HPS4-212ENST00000481910 MANBAO00462 879 aa11.04□□□□□ -0.64
HPS4-212ENST00000481910 NDUFS4O43181 175 aa11.04□□□□□ -0.64
HPS4-212ENST00000481910 STATHP02808 62 aa11.04□□□□□ -0.64
HPS4-212ENST00000481910 KITP10721 976 aa11.04□□□□□ -0.64
HPS4-212ENST00000481910 CCL4P13236 92 aa11.04□□□□□ -0.64
HPS4-212ENST00000481910 CTRB1P17538 263 aa11.04□□□□□ -0.64
HPS4-212ENST00000481910 GSTM2P28161 218 aa11.04□□□□□ -0.64
HPS4-212ENST00000481910 WASHC2DQ5SRD0 308 aa11.04□□□□□ -0.64
HPS4-212ENST00000481910 KANK2Q63ZY3 851 aa11.04□□□□□ -0.64
HPS4-212ENST00000481910 CTRB2Q6GPI1 263 aa11.04□□□□□ -0.64
HPS4-212ENST00000481910 ASPGQ86U10 573 aa11.04□□□□□ -0.64
HPS4-212ENST00000481910 CRLF3Q8IUI8 442 aa11.04□□□□□ -0.64
HPS4-212ENST00000481910 ZNF655Q8N720 491 aaPredicted RBP11.04□□□□□ -0.64
HPS4-212ENST00000481910 WDR20Q8TBZ3 569 aa11.04□□□□□ -0.64
HPS4-212ENST00000481910 EFHD2Q96C19 240 aaPredicted RBP11.04□□□□□ -0.64
HPS4-212ENST00000481910 ZNF501Q96CX3 271 aaPredicted RBP11.04□□□□□ -0.64
HPS4-212ENST00000481910 VPS50Q96JG6 964 aa11.04□□□□□ -0.64
HPS4-212ENST00000481910 C7orf26Q96N11 449 aa11.04□□□□□ -0.64
HPS4-212ENST00000481910 MACROD1Q9BQ69 325 aa11.04□□□□□ -0.64
HPS4-212ENST00000481910 KLHL4Q9C0H6 718 aa11.04□□□□□ -0.64
HPS4-212ENST00000481910 RHBGQ9H310 441 aa11.04□□□□□ -0.64
HPS4-212ENST00000481910 STARD5Q9NSY2 213 aa11.04□□□□□ -0.64
HPS4-212ENST00000481910 PNPOQ9NVS9 261 aa11.04□□□□□ -0.64
HPS4-212ENST00000481910 ADGRE2Q9UHX3 823 aa11.04□□□□□ -0.64
HPS4-212ENST00000481910 LOXL2Q9Y4K0 774 aa11.04□□□□□ -0.64
HPS4-212ENST00000481910 DNAJC15Q9Y5T4 150 aa11.04□□□□□ -0.64
HPS4-212ENST00000481910 PTPRBP23467 1997 aa11.04□□□□□ -0.64
HPS4-212ENST00000481910 SPEGQ15772 3267 aa11.04□□□□□ -0.64
HPS4-212ENST00000481910 DMXL1Q9Y485 3027 aa11.04□□□□□ -0.64
HPS4-212ENST00000481910 ADAMTS20P59510 1910 aa11.04□□□□□ -0.64
HPS4-212ENST00000481910 CCDC187A0A096LP49 1063 aa11.03□□□□□ -0.64
HPS4-212ENST00000481910 MAGEB17A8MXT2 336 aa11.03□□□□□ -0.64
HPS4-212ENST00000481910 OR2B3O76000 313 aa11.03□□□□□ -0.64
HPS4-212ENST00000481910 ATP6V1G2O95670 118 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms