RNA–Protein interactions for RNA: ENST00000481040.1

COPA-203, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 3

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-203ENST00000481040 CHRNA9Q9UGM1 479 aa4.84□□□□□ -1.63
COPA-203ENST00000481040 RALYQ9UKM9 306 aaKnown RBP4.84□□□□□ -1.63
COPA-203ENST00000481040 PCDHA7Q9UN72 937 aa4.84□□□□□ -1.63
COPA-203ENST00000481040 VDAC3Q9Y277 283 aa4.84□□□□□ -1.63
COPA-203ENST00000481040 MRPS7Q9Y2R9 242 aaKnown RBP4.84□□□□□ -1.63
COPA-203ENST00000481040 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.84□□□□□ -1.63
COPA-203ENST00000481040 IGLV5-37A0A075B6J1 123 aa4.83□□□□□ -1.64
COPA-203ENST00000481040 EME2A4GXA9 379 aaPredicted RBP4.83□□□□□ -1.64
COPA-203ENST00000481040 XPO1O14980 1071 aaKnown RBP4.83□□□□□ -1.64
COPA-203ENST00000481040 NUDT21O43809 227 aaKnown RBP4.83□□□□□ -1.64
COPA-203ENST00000481040 GPRIN2O60269 458 aa4.83□□□□□ -1.64
COPA-203ENST00000481040 KIF5CO60282 957 aa4.83□□□□□ -1.64
COPA-203ENST00000481040 TBX19O60806 448 aa4.83□□□□□ -1.64
COPA-203ENST00000481040 PRKRAO75569 313 aaKnown RBP4.83□□□□□ -1.64
COPA-203ENST00000481040 RHOBTB1O94844 696 aa4.83□□□□□ -1.64
COPA-203ENST00000481040 MFN2O95140 757 aa4.83□□□□□ -1.64
COPA-203ENST00000481040 BAG4O95429 457 aaKnown RBP4.83□□□□□ -1.64
COPA-203ENST00000481040 ASNSP08243 561 aa4.83□□□□□ -1.64
COPA-203ENST00000481040 GSTA2P09210 222 aa4.83□□□□□ -1.64
COPA-203ENST00000481040 EZRP15311 586 aaKnown RBP4.83□□□□□ -1.64
COPA-203ENST00000481040 LHCGRP22888 699 aa4.83□□□□□ -1.64
COPA-203ENST00000481040 EPHA2P29317 976 aa4.83□□□□□ -1.64
COPA-203ENST00000481040 ALDH4A1P30038 563 aa4.83□□□□□ -1.64
COPA-203ENST00000481040 FCGR2BP31994 310 aaPredicted RBP4.83□□□□□ -1.64
COPA-203ENST00000481040 ADRA1AP35348 466 aa4.83□□□□□ -1.64
COPA-203ENST00000481040 GEMP55040 296 aa4.83□□□□□ -1.64
COPA-203ENST00000481040 CDH11P55287 796 aa4.83□□□□□ -1.64
COPA-203ENST00000481040 RPL24P83731 157 aaKnown RBP4.83□□□□□ -1.64
COPA-203ENST00000481040 GABPAQ06546 454 aa4.83□□□□□ -1.64
COPA-203ENST00000481040 LGALS3BPQ08380 585 aa4.83□□□□□ -1.64
COPA-203ENST00000481040 HERC3Q15034 1050 aa4.83□□□□□ -1.64
COPA-203ENST00000481040 SHROOM1Q2M3G4 852 aaPredicted RBP4.83□□□□□ -1.64
COPA-203ENST00000481040 GPAT3Q53EU6 434 aa4.83□□□□□ -1.64
COPA-203ENST00000481040 XKR3Q5GH77 459 aa4.83□□□□□ -1.64
COPA-203ENST00000481040 DCAF10Q5QP82 559 aa4.83□□□□□ -1.64
COPA-203ENST00000481040 NCR3LG1Q68D85 454 aa4.83□□□□□ -1.64
COPA-203ENST00000481040 HIST2H2AA3Q6FI13 130 aa4.83□□□□□ -1.64
COPA-203ENST00000481040 ERASQ7Z444 233 aa4.83□□□□□ -1.64
COPA-203ENST00000481040 C5orf24Q7Z6I8 188 aa4.83□□□□□ -1.64
COPA-203ENST00000481040 YRDCQ86U90 279 aaKnown RBP4.83□□□□□ -1.64
COPA-203ENST00000481040 PLD3Q8IV08 490 aa4.83□□□□□ -1.64
COPA-203ENST00000481040 ZNF679Q8IYX0 411 aa4.83□□□□□ -1.64
COPA-203ENST00000481040 MUC20Q8N307 709 aaPredicted RBP4.83□□□□□ -1.64
COPA-203ENST00000481040 SLC43A2Q8N370 569 aa4.83□□□□□ -1.64
COPA-203ENST00000481040 STEAP2Q8NFT2 490 aa4.83□□□□□ -1.64
COPA-203ENST00000481040 OR2T12Q8NG77 320 aa4.83□□□□□ -1.64
COPA-203ENST00000481040 OR4C15Q8NGM1 316 aa4.83□□□□□ -1.64
COPA-203ENST00000481040 OR2T3Q8NH03 318 aa4.83□□□□□ -1.64
COPA-203ENST00000481040 METTL21AQ8WXB1 218 aa4.83□□□□□ -1.64
COPA-203ENST00000481040 PHYHIPQ92561 330 aa4.83□□□□□ -1.64
COPA-203ENST00000481040 PIK3R3Q92569 461 aa4.83□□□□□ -1.64
COPA-203ENST00000481040 MARK4Q96L34 752 aa4.83□□□□□ -1.64
COPA-203ENST00000481040 CDCA3Q99618 268 aaPredicted RBP4.83□□□□□ -1.64
COPA-203ENST00000481040 EDEM2Q9BV94 578 aa4.83□□□□□ -1.64
COPA-203ENST00000481040 NUSAP1Q9BXS6 441 aaKnown RBP4.83□□□□□ -1.64
COPA-203ENST00000481040 LRRC40Q9H9A6 602 aa4.83□□□□□ -1.64
COPA-203ENST00000481040 NMRK1Q9NWW6 199 aa4.83□□□□□ -1.64
COPA-203ENST00000481040 RAI14Q9P0K7 980 aa4.83□□□□□ -1.64
COPA-203ENST00000481040 IL36AQ9UHA7 158 aa4.83□□□□□ -1.64
COPA-203ENST00000481040 ATG4BQ9Y4P1 393 aa4.83□□□□□ -1.64
COPA-203ENST00000481040 MAB21L2Q9Y586 359 aa4.83□□□□□ -1.64
COPA-203ENST00000481040 ETV7Q9Y603 341 aa4.83□□□□□ -1.64
COPA-203ENST00000481040 COLEC10Q9Y6Z7 277 aa4.83□□□□□ -1.64
COPA-203ENST00000481040 R4GN57 208 aa4.83□□□□□ -1.64
COPA-203ENST00000481040 C15orf38-AP3S2A0A0A6YYH1 394 aa4.82□□□□□ -1.64
COPA-203ENST00000481040 LOC101059948A0A1B0GTJ6 334 aa4.82□□□□□ -1.64
COPA-203ENST00000481040 ATP6AP2A0A1C7CYW4 349 aa4.82□□□□□ -1.64
COPA-203ENST00000481040 ZNF732B4DXR9 585 aa4.82□□□□□ -1.64
COPA-203ENST00000481040 LGALS8O00214 317 aa4.82□□□□□ -1.64
COPA-203ENST00000481040 XPNPEP2O43895 674 aa4.82□□□□□ -1.64
COPA-203ENST00000481040 RBMXL2O75526 392 aaKnown RBP4.82□□□□□ -1.64
COPA-203ENST00000481040 GLUD1P00367 558 aa4.82□□□□□ -1.64
COPA-203ENST00000481040 CELA2AP08217 269 aa4.82□□□□□ -1.64
COPA-203ENST00000481040 HMBSP08397 361 aa4.82□□□□□ -1.64
COPA-203ENST00000481040 CT45A8P0DMV1 189 aa4.82□□□□□ -1.64
COPA-203ENST00000481040 CT45A9P0DMV2 189 aa4.82□□□□□ -1.64
COPA-203ENST00000481040 IGHV4-31P0DP07 118 aa4.82□□□□□ -1.64
COPA-203ENST00000481040 TOP1P11387 765 aaKnown RBP4.82□□□□□ -1.64
COPA-203ENST00000481040 DARSP14868 501 aaKnown RBP4.82□□□□□ -1.64
COPA-203ENST00000481040 ATP6V1C1P21283 382 aa4.82□□□□□ -1.64
COPA-203ENST00000481040 RBMS1P29558 406 aaKnown RBP4.82□□□□□ -1.64
COPA-203ENST00000481040 GDI1P31150 447 aa4.82□□□□□ -1.64
COPA-203ENST00000481040 SLC6A8P48029 635 aa4.82□□□□□ -1.64
COPA-203ENST00000481040 GLUD2P49448 558 aa4.82□□□□□ -1.64
COPA-203ENST00000481040 PCYT1AP49585 367 aa4.82□□□□□ -1.64
COPA-203ENST00000481040 INHBCP55103 352 aa4.82□□□□□ -1.64
COPA-203ENST00000481040 SP3Q02447 781 aa4.82□□□□□ -1.64
COPA-203ENST00000481040 TRAF2Q12933 501 aa4.82□□□□□ -1.64
COPA-203ENST00000481040 KEAP1Q14145 624 aa4.82□□□□□ -1.64
COPA-203ENST00000481040 HEPACAMQ14CZ8 416 aa4.82□□□□□ -1.64
COPA-203ENST00000481040 PDK4Q16654 411 aa4.82□□□□□ -1.64
COPA-203ENST00000481040 CT45A2Q5DJT8 189 aa4.82□□□□□ -1.64
COPA-203ENST00000481040 STXBP5Q5T5C0 1151 aa4.82□□□□□ -1.64
COPA-203ENST00000481040 ZNF776Q68DI1 518 aaPredicted RBP4.82□□□□□ -1.64
COPA-203ENST00000481040 SNRNP48Q6IEG0 339 aaKnown RBP4.82□□□□□ -1.64
COPA-203ENST00000481040 ARHGAP11AQ6P4F7 1023 aa4.82□□□□□ -1.64
COPA-203ENST00000481040 DHRS11Q6UWP2 260 aa4.82□□□□□ -1.64
COPA-203ENST00000481040 ZYG11AQ6WRX3 759 aa4.82□□□□□ -1.64
COPA-203ENST00000481040 CYP4V2Q6ZWL3 525 aaPredicted RBP4.82□□□□□ -1.64
COPA-203ENST00000481040 RD3Q7Z3Z2 195 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms