RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 KRTCAP3Q53RY4 240 aa14.27□□□□□ -0.13
LIMS3-203ENST00000480744 RPTNQ6XPR3 784 aa14.27□□□□□ -0.13
LIMS3-203ENST00000480744 MCEMP1Q8IX19 187 aa14.27□□□□□ -0.13
LIMS3-203ENST00000480744 SPATA6LQ8N4H0 392 aa14.27□□□□□ -0.13
LIMS3-203ENST00000480744 THAP3Q8WTV1 239 aaPredicted RBP14.27□□□□□ -0.13
LIMS3-203ENST00000480744 GAL3ST3Q96A11 431 aa14.27□□□□□ -0.13
LIMS3-203ENST00000480744 RHBDF1Q96CC6 855 aa14.27□□□□□ -0.13
LIMS3-203ENST00000480744 SMIM10Q96HG1 83 aa14.27□□□□□ -0.13
LIMS3-203ENST00000480744 DEFB126Q9BYW3 111 aa14.27□□□□□ -0.13
LIMS3-203ENST00000480744 AICDAQ9GZX7 198 aa14.27□□□□□ -0.13
LIMS3-203ENST00000480744 RHOJQ9H4E5 214 aa14.27□□□□□ -0.13
LIMS3-203ENST00000480744 PRM3Q9NNZ6 103 aa14.27□□□□□ -0.13
LIMS3-203ENST00000480744 MOCS1Q9NZB8 636 aa14.27□□□□□ -0.13
LIMS3-203ENST00000480744 KLF2Q9Y5W3 355 aaPredicted RBP14.27□□□□□ -0.13
LIMS3-203ENST00000480744 ABCA12Q86UK0 2595 aa14.27□□□□□ -0.13
LIMS3-203ENST00000480744 IGKV3D-11A0A0A0MRZ8 115 aa14.26□□□□□ -0.13
LIMS3-203ENST00000480744 TRBV11-1A0A0K0K1C0 115 aa14.26□□□□□ -0.13
LIMS3-203ENST00000480744 E7ESA3 106 aa14.26□□□□□ -0.13
LIMS3-203ENST00000480744 FCHO1O14526 889 aa14.26□□□□□ -0.13
LIMS3-203ENST00000480744 TP73O15350 636 aa14.26□□□□□ -0.13
LIMS3-203ENST00000480744 ZNHIT1O43257 154 aa14.26□□□□□ -0.13
LIMS3-203ENST00000480744 ERI3O43414 337 aaKnown RBP14.26□□□□□ -0.13
LIMS3-203ENST00000480744 NME2P1O60361 137 aa14.26□□□□□ -0.13
LIMS3-203ENST00000480744 MYO1DO94832 1006 aa14.26□□□□□ -0.13
LIMS3-203ENST00000480744 ABOP16442 354 aa14.26□□□□□ -0.13
LIMS3-203ENST00000480744 ZNF24P17028 368 aa14.26□□□□□ -0.13
LIMS3-203ENST00000480744 NME2P22392 152 aa14.26□□□□□ -0.13
LIMS3-203ENST00000480744 HTR1EP28566 365 aa14.26□□□□□ -0.13
LIMS3-203ENST00000480744 SLC6A12P48065 614 aa14.26□□□□□ -0.13
LIMS3-203ENST00000480744 MLF1P58340 268 aa14.26□□□□□ -0.13
LIMS3-203ENST00000480744 TMIGD1Q6UXZ0 262 aa14.26□□□□□ -0.13
LIMS3-203ENST00000480744 BNC2Q6ZN30 1099 aaPredicted RBP14.26□□□□□ -0.13
LIMS3-203ENST00000480744 SLCO4C1Q6ZQN7 724 aa14.26□□□□□ -0.13
LIMS3-203ENST00000480744 SPPL2CQ8IUH8 684 aa14.26□□□□□ -0.13
LIMS3-203ENST00000480744 KRT78Q8N1N4 520 aa14.26□□□□□ -0.13
LIMS3-203ENST00000480744 CPSF7Q8N684 471 aaKnown RBP14.26□□□□□ -0.13
LIMS3-203ENST00000480744 NFAM1Q8NET5 270 aaPredicted RBP14.26□□□□□ -0.13
LIMS3-203ENST00000480744 TMEM125Q96AQ2 219 aa14.26□□□□□ -0.13
LIMS3-203ENST00000480744 DPH5Q9H2P9 285 aa14.26□□□□□ -0.13
LIMS3-203ENST00000480744 CAB39LQ9H9S4 337 aa14.26□□□□□ -0.13
LIMS3-203ENST00000480744 POPDC3Q9HBV1 291 aa14.26□□□□□ -0.13
LIMS3-203ENST00000480744 SMYD2Q9NRG4 433 aa14.26□□□□□ -0.13
LIMS3-203ENST00000480744 PNO1Q9NRX1 252 aaKnown RBP14.26□□□□□ -0.13
LIMS3-203ENST00000480744 WWOXQ9NZC7 414 aa14.26□□□□□ -0.13
LIMS3-203ENST00000480744 TXNDC16Q9P2K2 825 aa14.26□□□□□ -0.13
LIMS3-203ENST00000480744 FBXW2Q9UKT8 454 aa14.26□□□□□ -0.13
LIMS3-203ENST00000480744 MTO1Q9Y2Z2 717 aaKnown RBP14.26□□□□□ -0.13
LIMS3-203ENST00000480744 PKDREJQ9NTG1 2253 aa14.26□□□□□ -0.13
LIMS3-203ENST00000480744 PHGDHO43175 533 aaKnown RBP14.25□□□□□ -0.13
LIMS3-203ENST00000480744 ASNA1O43681 348 aa14.25□□□□□ -0.13
LIMS3-203ENST00000480744 SSTR1P30872 391 aa14.25□□□□□ -0.13
LIMS3-203ENST00000480744 HNRNPH1P31943 449 aaKnown RBP14.25□□□□□ -0.13
LIMS3-203ENST00000480744 HLCSP50747 726 aa14.25□□□□□ -0.13
LIMS3-203ENST00000480744 CLCN2P51788 898 aa14.25□□□□□ -0.13
LIMS3-203ENST00000480744 SMSP52788 366 aa14.25□□□□□ -0.13
LIMS3-203ENST00000480744 ADORA2A-AS1P86434 159 aa14.25□□□□□ -0.13
LIMS3-203ENST00000480744 HSF1Q00613 529 aa14.25□□□□□ -0.13
LIMS3-203ENST00000480744 RUNX2Q13950 521 aa14.25□□□□□ -0.13
LIMS3-203ENST00000480744 TGFBIQ15582 683 aa14.25□□□□□ -0.13
LIMS3-203ENST00000480744 FBXO48Q5FWF7 155 aa14.25□□□□□ -0.13
LIMS3-203ENST00000480744 SYT10Q6XYQ8 523 aa14.25□□□□□ -0.13
LIMS3-203ENST00000480744 KLHDC8AQ8IYD2 350 aa14.25□□□□□ -0.13
LIMS3-203ENST00000480744 SNX31Q8N9S9 440 aa14.25□□□□□ -0.13
LIMS3-203ENST00000480744 FAM47BQ8NA70 645 aa14.25□□□□□ -0.13
LIMS3-203ENST00000480744 TTLQ8NG68 377 aa14.25□□□□□ -0.13
LIMS3-203ENST00000480744 PYROXD1Q8WU10 500 aa14.25□□□□□ -0.13
LIMS3-203ENST00000480744 TSPAN17Q96FV3 270 aa14.25□□□□□ -0.13
LIMS3-203ENST00000480744 SAYSD1Q9NPB0 183 aa14.25□□□□□ -0.13
LIMS3-203ENST00000480744 PRTFDC1Q9NRG1 225 aa14.25□□□□□ -0.13
LIMS3-203ENST00000480744 MMACHCQ9Y4U1 282 aa14.25□□□□□ -0.13
LIMS3-203ENST00000480744 EML6Q6ZMW3 1958 aa14.24□□□□□ -0.13
LIMS3-203ENST00000480744 A0A088AWK7 358 aa14.24□□□□□ -0.13
LIMS3-203ENST00000480744 ANKDD1BA6NHY2 528 aa14.24□□□□□ -0.13
LIMS3-203ENST00000480744 CLGNO14967 610 aa14.24□□□□□ -0.13
LIMS3-203ENST00000480744 B3GALT2O43825 422 aa14.24□□□□□ -0.13
LIMS3-203ENST00000480744 CCDC166P0CW27 439 aa14.24□□□□□ -0.13
LIMS3-203ENST00000480744 COX6B1P14854 86 aa14.24□□□□□ -0.13
LIMS3-203ENST00000480744 ZNF10P21506 573 aaPredicted RBP14.24□□□□□ -0.13
LIMS3-203ENST00000480744 PPP2R1BP30154 601 aa14.24□□□□□ -0.13
LIMS3-203ENST00000480744 RFC3P40938 356 aa14.24□□□□□ -0.13
LIMS3-203ENST00000480744 HSPA7P48741 367 aa14.24□□□□□ -0.13
LIMS3-203ENST00000480744 PLA2G16P53816 162 aa14.24□□□□□ -0.13
LIMS3-203ENST00000480744 RAB38P57729 211 aa14.24□□□□□ -0.13
LIMS3-203ENST00000480744 ETF1P62495 437 aaKnown RBP14.24□□□□□ -0.13
LIMS3-203ENST00000480744 POU4F1Q01851 419 aa14.24□□□□□ -0.13
LIMS3-203ENST00000480744 CALCOCO2Q13137 446 aa14.24□□□□□ -0.13
LIMS3-203ENST00000480744 SLC13A2Q13183 592 aa14.24□□□□□ -0.13
LIMS3-203ENST00000480744 RNFT1Q5M7Z0 435 aa14.24□□□□□ -0.13
LIMS3-203ENST00000480744 XKRXQ6PP77 449 aa14.24□□□□□ -0.13
LIMS3-203ENST00000480744 NCCRP1Q6ZVX7 275 aaPredicted RBP14.24□□□□□ -0.13
LIMS3-203ENST00000480744 CLNKQ7Z7G1 428 aa14.24□□□□□ -0.13
LIMS3-203ENST00000480744 ZNF227Q86WZ6 799 aa14.24□□□□□ -0.13
LIMS3-203ENST00000480744 GPSM1Q86YR5 675 aa14.24□□□□□ -0.13
LIMS3-203ENST00000480744 SIAH3Q8IW03 269 aa14.24□□□□□ -0.13
LIMS3-203ENST00000480744 GHDCQ8N2G8 530 aa14.24□□□□□ -0.13
LIMS3-203ENST00000480744 BBOF1Q8ND07 529 aa14.24□□□□□ -0.13
LIMS3-203ENST00000480744 B3GNT7Q8NFL0 401 aa14.24□□□□□ -0.13
LIMS3-203ENST00000480744 CDKL2Q92772 493 aa14.24□□□□□ -0.13
LIMS3-203ENST00000480744 EXT2Q93063 718 aa14.24□□□□□ -0.13
LIMS3-203ENST00000480744 ESAMQ96AP7 390 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms