RNA–Protein interactions for RNA: ENST00000480562.3

ABCF3-214, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 1 (best)

Gene ABCF3, Length 1,182 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-214ENST00000480562 MYO1DO94832 1006 aa17.6■□□□□ 0.41
ABCF3-214ENST00000480562 SEC31AO94979 1220 aaKnown RBP17.6■□□□□ 0.41
ABCF3-214ENST00000480562 C1GALT1C1LP0DN25 315 aa17.6■□□□□ 0.41
ABCF3-214ENST00000480562 COX6B1P14854 86 aa17.6■□□□□ 0.41
ABCF3-214ENST00000480562 ZNF24P17028 368 aa17.6■□□□□ 0.41
ABCF3-214ENST00000480562 HLCSP50747 726 aa17.6■□□□□ 0.41
ABCF3-214ENST00000480562 CDKL1Q00532 357 aa17.6■□□□□ 0.41
ABCF3-214ENST00000480562 RUNX2Q13950 521 aa17.6■□□□□ 0.41
ABCF3-214ENST00000480562 SLBPQ14493 270 aaKnown RBP eCLIP17.6■□□□□ 0.41
ABCF3-214ENST00000480562 SLCO4C1Q6ZQN7 724 aa17.6■□□□□ 0.41
ABCF3-214ENST00000480562 FRA10AC1Q70Z53 315 aa17.6■□□□□ 0.41
ABCF3-214ENST00000480562 CREG2Q8IUH2 290 aa17.6■□□□□ 0.41
ABCF3-214ENST00000480562 CHERPQ8IWX8 916 aaKnown RBP17.6■□□□□ 0.41
ABCF3-214ENST00000480562 GHDCQ8N2G8 530 aa17.6■□□□□ 0.41
ABCF3-214ENST00000480562 CCT6BQ92526 530 aa17.6■□□□□ 0.41
ABCF3-214ENST00000480562 ANKRD7Q92527 254 aa17.6■□□□□ 0.41
ABCF3-214ENST00000480562 TMEM125Q96AQ2 219 aa17.6■□□□□ 0.41
ABCF3-214ENST00000480562 PDLIM2Q96JY6 352 aa17.6■□□□□ 0.41
ABCF3-214ENST00000480562 TRIM45Q9H8W5 580 aaPredicted RBP17.6■□□□□ 0.41
ABCF3-214ENST00000480562 MOCS1Q9NZB8 636 aa17.6■□□□□ 0.41
ABCF3-214ENST00000480562 PDZD2O15018 2839 aa17.59■□□□□ 0.41
ABCF3-214ENST00000480562 GTF3C1Q12789 2109 aa17.59■□□□□ 0.41
ABCF3-214ENST00000480562 NCF1BA6NI72 391 aaPredicted RBP17.59■□□□□ 0.41
ABCF3-214ENST00000480562 USP27XA6NNY8 438 aa17.59■□□□□ 0.41
ABCF3-214ENST00000480562 NCF1CA8MVU1 366 aaPredicted RBP17.59■□□□□ 0.41
ABCF3-214ENST00000480562 C19orf84I3L1E1 186 aa17.59■□□□□ 0.41
ABCF3-214ENST00000480562 CDK2AP1O14519 115 aa17.59■□□□□ 0.41
ABCF3-214ENST00000480562 NCF1P14598 390 aaPredicted RBP17.59■□□□□ 0.41
ABCF3-214ENST00000480562 ELAVL4P26378 380 aaKnown RBP17.59■□□□□ 0.41
ABCF3-214ENST00000480562 PPP2R1BP30154 601 aa17.59■□□□□ 0.41
ABCF3-214ENST00000480562 HNRNPH1P31943 449 aaKnown RBP17.59■□□□□ 0.41
ABCF3-214ENST00000480562 TRHRP34981 398 aaPredicted RBP17.59■□□□□ 0.41
ABCF3-214ENST00000480562 PTGER4P35408 488 aa17.59■□□□□ 0.41
ABCF3-214ENST00000480562 RFC3P40938 356 aa17.59■□□□□ 0.41
ABCF3-214ENST00000480562 HNMTP50135 292 aa17.59■□□□□ 0.41
ABCF3-214ENST00000480562 TMIGD1Q6UXZ0 262 aa17.59■□□□□ 0.41
ABCF3-214ENST00000480562 C3P1Q6ZMU1 363 aa17.59■□□□□ 0.41
ABCF3-214ENST00000480562 CAPN12Q6ZSI9 719 aa17.59■□□□□ 0.41
ABCF3-214ENST00000480562 GDF7Q7Z4P5 450 aa17.59■□□□□ 0.41
ABCF3-214ENST00000480562 FGD2Q7Z6J4 655 aa17.59■□□□□ 0.41
ABCF3-214ENST00000480562 ADAMTSL2Q86TH1 951 aa17.59■□□□□ 0.41
ABCF3-214ENST00000480562 DOLPP1Q86YN1 238 aa17.59■□□□□ 0.41
ABCF3-214ENST00000480562 SPATA6LQ8N4H0 392 aa17.59■□□□□ 0.41
ABCF3-214ENST00000480562 APCDD1LQ8NCL9 501 aa17.59■□□□□ 0.41
ABCF3-214ENST00000480562 B3GNT7Q8NFL0 401 aa17.59■□□□□ 0.41
ABCF3-214ENST00000480562 AGAP11Q8TF27 550 aa17.59■□□□□ 0.41
ABCF3-214ENST00000480562 RHBDF1Q96CC6 855 aa17.59■□□□□ 0.41
ABCF3-214ENST00000480562 FAR2Q96K12 515 aa17.59■□□□□ 0.41
ABCF3-214ENST00000480562 RUNDC3BQ96NL0 473 aa17.59■□□□□ 0.41
ABCF3-214ENST00000480562 PHF12Q96QT6 1004 aa17.59■□□□□ 0.41
ABCF3-214ENST00000480562 GPAMQ9HCL2 828 aa17.59■□□□□ 0.41
ABCF3-214ENST00000480562 PNO1Q9NRX1 252 aaKnown RBP17.59■□□□□ 0.41
ABCF3-214ENST00000480562 FBXW2Q9UKT8 454 aa17.59■□□□□ 0.41
ABCF3-214ENST00000480562 MMACHCQ9Y4U1 282 aa17.59■□□□□ 0.41
ABCF3-214ENST00000480562 DCHS2Q6V1P9 2916 aa17.59■□□□□ 0.41
ABCF3-214ENST00000480562 TEP1Q99973 2627 aaKnown RBP17.59■□□□□ 0.41
ABCF3-214ENST00000480562 LRIT2A6NDA9 550 aa17.58■□□□□ 0.4
ABCF3-214ENST00000480562 TGFBR3LH3BV60 316 aa17.58■□□□□ 0.4
ABCF3-214ENST00000480562 FCHO1O14526 889 aa17.58■□□□□ 0.4
ABCF3-214ENST00000480562 ERI3O43414 337 aaKnown RBP17.58■□□□□ 0.4
ABCF3-214ENST00000480562 GNAZP19086 355 aa17.58■□□□□ 0.4
ABCF3-214ENST00000480562 AGAP20933 346 aa17.58■□□□□ 0.4
ABCF3-214ENST00000480562 PTGER1P34995 402 aa17.58■□□□□ 0.4
ABCF3-214ENST00000480562 SLC6A12P48065 614 aa17.58■□□□□ 0.4
ABCF3-214ENST00000480562 MEOX1P50221 254 aa17.58■□□□□ 0.4
ABCF3-214ENST00000480562 CLCN2P51788 898 aa17.58■□□□□ 0.4
ABCF3-214ENST00000480562 HNRNPFP52597 415 aaKnown RBP17.58■□□□□ 0.4
ABCF3-214ENST00000480562 STXBP1P61764 594 aaKnown RBP17.58■□□□□ 0.4
ABCF3-214ENST00000480562 ARMC10Q8N2F6 343 aa17.58■□□□□ 0.4
ABCF3-214ENST00000480562 TMEM52Q8NDY8 209 aa17.58■□□□□ 0.4
ABCF3-214ENST00000480562 GAL3ST3Q96A11 431 aa17.58■□□□□ 0.4
ABCF3-214ENST00000480562 MTFMTQ96DP5 389 aaKnown RBP17.58■□□□□ 0.4
ABCF3-214ENST00000480562 MS4A6EQ96DS6 147 aa17.58■□□□□ 0.4
ABCF3-214ENST00000480562 VPS39Q96JC1 886 aa17.58■□□□□ 0.4
ABCF3-214ENST00000480562 RHOJQ9H4E5 214 aa17.58■□□□□ 0.4
ABCF3-214ENST00000480562 PRTFDC1Q9NRG1 225 aa17.58■□□□□ 0.4
ABCF3-214ENST00000480562 SMYD2Q9NRG4 433 aa17.58■□□□□ 0.4
ABCF3-214ENST00000480562 ZNF223Q9UK11 482 aaPredicted RBP17.58■□□□□ 0.4
ABCF3-214ENST00000480562 ASB1Q9Y576 335 aa17.58■□□□□ 0.4
ABCF3-214ENST00000480562 EFCAB8A8MWE9 144 aa17.57■□□□□ 0.4
ABCF3-214ENST00000480562 E7ESA3 106 aa17.57■□□□□ 0.4
ABCF3-214ENST00000480562 CLDN14O95500 239 aa17.57■□□□□ 0.4
ABCF3-214ENST00000480562 RPL21P46778 160 aaKnown RBP17.57■□□□□ 0.4
ABCF3-214ENST00000480562 GNG11P61952 73 aa17.57■□□□□ 0.4
ABCF3-214ENST00000480562 MRPS25P82663 173 aaKnown RBP17.57■□□□□ 0.4
ABCF3-214ENST00000480562 FBXO48Q5FWF7 155 aa17.57■□□□□ 0.4
ABCF3-214ENST00000480562 ADNP2Q6IQ32 1131 aa17.57■□□□□ 0.4
ABCF3-214ENST00000480562 SULF2Q8IWU5 870 aa17.57■□□□□ 0.4
ABCF3-214ENST00000480562 SCUBE1Q8IWY4 988 aa17.57■□□□□ 0.4
ABCF3-214ENST00000480562 KLHDC8AQ8IYD2 350 aa17.57■□□□□ 0.4
ABCF3-214ENST00000480562 FAM47BQ8NA70 645 aa17.57■□□□□ 0.4
ABCF3-214ENST00000480562 TRIM8Q9BZR9 551 aa17.57■□□□□ 0.4
ABCF3-214ENST00000480562 CAB39LQ9H9S4 337 aa17.57■□□□□ 0.4
ABCF3-214ENST00000480562 KLF13Q9Y2Y9 288 aaPredicted RBP17.57■□□□□ 0.4
ABCF3-214ENST00000480562 MTO1Q9Y2Z2 717 aaKnown RBP17.57■□□□□ 0.4
ABCF3-214ENST00000480562 SNX24Q9Y343 169 aa17.57■□□□□ 0.4
ABCF3-214ENST00000480562 CLDN16Q9Y5I7 305 aa17.57■□□□□ 0.4
ABCF3-214ENST00000480562 CSMD2Q7Z408 3487 aa17.56■□□□□ 0.4
ABCF3-214ENST00000480562 PRRG2O14669 202 aa17.56■□□□□ 0.4
ABCF3-214ENST00000480562 ADAM10O14672 748 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms