RNA–Protein interactions for RNA: ENST00000480222.1

SIK3-209, Transcript of SIK family kinase 3, humanhuman

TSL 3

Gene SIK3, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-209ENST00000480222 PCDHGA1Q9Y5H4 931 aa11.97□□□□□ -0.49
SIK3-209ENST00000480222 EP300Q09472 2414 aaPredicted RBP11.96□□□□□ -0.49
SIK3-209ENST00000480222 COL27A1Q8IZC6 1860 aaPredicted RBP11.96□□□□□ -0.49
SIK3-209ENST00000480222 RTCAO00442 366 aaKnown RBP11.96□□□□□ -0.49
SIK3-209ENST00000480222 NR5A2O00482 541 aa11.96□□□□□ -0.49
SIK3-209ENST00000480222 SCAMP2O15127 329 aaKnown RBP11.96□□□□□ -0.49
SIK3-209ENST00000480222 EEDO75530 441 aaKnown RBP11.96□□□□□ -0.49
SIK3-209ENST00000480222 CBX6O95503 412 aa11.96□□□□□ -0.49
SIK3-209ENST00000480222 EIF2S1P05198 315 aaKnown RBP11.96□□□□□ -0.49
SIK3-209ENST00000480222 IL6P05231 212 aa11.96□□□□□ -0.49
SIK3-209ENST00000480222 KLK1P06870 262 aa11.96□□□□□ -0.49
SIK3-209ENST00000480222 ZNF888P0CJ79 500 aaPredicted RBP11.96□□□□□ -0.49
SIK3-209ENST00000480222 SMIM10L1P0DMW3 83 aa11.96□□□□□ -0.49
SIK3-209ENST00000480222 ALOX12P18054 663 aa11.96□□□□□ -0.49
SIK3-209ENST00000480222 POLR2JP52435 117 aaKnown RBP11.96□□□□□ -0.49
SIK3-209ENST00000480222 LIMK1P53667 647 aa11.96□□□□□ -0.49
SIK3-209ENST00000480222 NME5P56597 212 aa11.96□□□□□ -0.49
SIK3-209ENST00000480222 UFM1P61960 85 aa11.96□□□□□ -0.49
SIK3-209ENST00000480222 E2F1Q01094 437 aa11.96□□□□□ -0.49
SIK3-209ENST00000480222 ACY1Q03154 408 aa11.96□□□□□ -0.49
SIK3-209ENST00000480222 KLC1Q07866 573 aa11.96□□□□□ -0.49
SIK3-209ENST00000480222 GRM7Q14831 915 aa11.96□□□□□ -0.49
SIK3-209ENST00000480222 SLC9A5Q14940 896 aa11.96□□□□□ -0.49
SIK3-209ENST00000480222 HKDC1Q2TB90 917 aa11.96□□□□□ -0.49
SIK3-209ENST00000480222 YOD1Q5VVQ6 348 aaPredicted RBP11.96□□□□□ -0.49
SIK3-209ENST00000480222 ZNF793Q6ZN11 406 aa11.96□□□□□ -0.49
SIK3-209ENST00000480222 ZNF574Q6ZN55 896 aaPredicted RBP11.96□□□□□ -0.49
SIK3-209ENST00000480222 GK5Q6ZS86 529 aa11.96□□□□□ -0.49
SIK3-209ENST00000480222 MSANTD1Q6ZTZ1 278 aa11.96□□□□□ -0.49
SIK3-209ENST00000480222 R3HCC1LQ7Z5L2 792 aaKnown RBP11.96□□□□□ -0.49
SIK3-209ENST00000480222 CAMKMTQ7Z624 323 aa11.96□□□□□ -0.49
SIK3-209ENST00000480222 FUNDC1Q8IVP5 155 aa11.96□□□□□ -0.49
SIK3-209ENST00000480222 SLITRK4Q8IW52 837 aa11.96□□□□□ -0.49
SIK3-209ENST00000480222 RIMKLAQ8IXN7 391 aa11.96□□□□□ -0.49
SIK3-209ENST00000480222 TMEM132CQ8N3T6 1108 aa11.96□□□□□ -0.49
SIK3-209ENST00000480222 TTC29Q8NA56 475 aaPredicted RBP11.96□□□□□ -0.49
SIK3-209ENST00000480222 KCT2Q8NC54 265 aa11.96□□□□□ -0.49
SIK3-209ENST00000480222 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.96□□□□□ -0.49
SIK3-209ENST00000480222 ZCCHC10Q8TBK6 192 aa11.96□□□□□ -0.49
SIK3-209ENST00000480222 MTERF3Q96E29 417 aa11.96□□□□□ -0.49
SIK3-209ENST00000480222 SMIM10Q96HG1 83 aa11.96□□□□□ -0.49
SIK3-209ENST00000480222 TEFMQ96QE5 360 aaKnown RBP11.96□□□□□ -0.49
SIK3-209ENST00000480222 SERINC2Q96SA4 455 aa11.96□□□□□ -0.49
SIK3-209ENST00000480222 KLHL31Q9H511 634 aa11.96□□□□□ -0.49
SIK3-209ENST00000480222 PRDM7Q9NQW5 492 aa11.96□□□□□ -0.49
SIK3-209ENST00000480222 DMXL1Q9Y485 3027 aa11.96□□□□□ -0.5
SIK3-209ENST00000480222 ASXL3Q9C0F0 2248 aa11.95□□□□□ -0.5
SIK3-209ENST00000480222 A0A1W2PP18 115 aa11.95□□□□□ -0.5
SIK3-209ENST00000480222 CCDC154A6NI56 674 aa11.95□□□□□ -0.5
SIK3-209ENST00000480222 C4orf51C9J302 202 aa11.95□□□□□ -0.5
SIK3-209ENST00000480222 ANGPT2O15123 496 aa11.95□□□□□ -0.5
SIK3-209ENST00000480222 CFLARO15519 480 aa11.95□□□□□ -0.5
SIK3-209ENST00000480222 HCRTR1O43613 425 aa11.95□□□□□ -0.5
SIK3-209ENST00000480222 B3GALT2O43825 422 aa11.95□□□□□ -0.5
SIK3-209ENST00000480222 RFPL3O75679 317 aa11.95□□□□□ -0.5
SIK3-209ENST00000480222 STATHP02808 62 aa11.95□□□□□ -0.5
SIK3-209ENST00000480222 T-ENOLP0DO92 83 aa11.95□□□□□ -0.5
SIK3-209ENST00000480222 CDK4P11802 303 aa11.95□□□□□ -0.5
SIK3-209ENST00000480222 ATP5A1P25705 553 aaKnown RBP11.95□□□□□ -0.5
SIK3-209ENST00000480222 CERS1P27544 350 aa11.95□□□□□ -0.5
SIK3-209ENST00000480222 SEPHS1P49903 392 aa11.95□□□□□ -0.5
SIK3-209ENST00000480222 ITGA1P56199 1179 aa11.95□□□□□ -0.5
SIK3-209ENST00000480222 RAB8AP61006 207 aa11.95□□□□□ -0.5
SIK3-209ENST00000480222 PDE7AQ13946 482 aa11.95□□□□□ -0.5
SIK3-209ENST00000480222 FAM53BQ14153 422 aa11.95□□□□□ -0.5
SIK3-209ENST00000480222 HEPACAMQ14CZ8 416 aa11.95□□□□□ -0.5
SIK3-209ENST00000480222 MUM1Q2TAK8 710 aa11.95□□□□□ -0.5
SIK3-209ENST00000480222 WASHC2DQ5SRD0 308 aa11.95□□□□□ -0.5
SIK3-209ENST00000480222 STPG1Q5TH74 334 aa11.95□□□□□ -0.5
SIK3-209ENST00000480222 MRM1Q6IN84 353 aaKnown RBP11.95□□□□□ -0.5
SIK3-209ENST00000480222 TLDC1Q6P9B6 456 aa11.95□□□□□ -0.5
SIK3-209ENST00000480222 RBM44Q6ZP01 1051 aaKnown RBP11.95□□□□□ -0.5
SIK3-209ENST00000480222 ERMP1Q7Z2K6 904 aa11.95□□□□□ -0.5
SIK3-209ENST00000480222 TMPRSS9Q7Z410 1059 aa11.95□□□□□ -0.5
SIK3-209ENST00000480222 GLRX5Q86SX6 157 aa11.95□□□□□ -0.5
SIK3-209ENST00000480222 PIP4P1Q86T03 277 aa11.95□□□□□ -0.5
SIK3-209ENST00000480222 ARHGEF39Q8N4T4 335 aa11.95□□□□□ -0.5
SIK3-209ENST00000480222 ACOT4Q8N9L9 421 aa11.95□□□□□ -0.5
SIK3-209ENST00000480222 OR8K5Q8NH50 307 aa11.95□□□□□ -0.5
SIK3-209ENST00000480222 CLHC1Q8NHS4 586 aa11.95□□□□□ -0.5
SIK3-209ENST00000480222 CDC26Q8NHZ8 85 aa11.95□□□□□ -0.5
SIK3-209ENST00000480222 C16orf78Q8WTQ4 265 aa11.95□□□□□ -0.5
SIK3-209ENST00000480222 SPDL1Q96EA4 605 aa11.95□□□□□ -0.5
SIK3-209ENST00000480222 MVB12AQ96EY5 273 aa11.95□□□□□ -0.5
SIK3-209ENST00000480222 TEX37Q96LM6 180 aa11.95□□□□□ -0.5
SIK3-209ENST00000480222 PRPF18Q99633 342 aaKnown RBP11.95□□□□□ -0.5
SIK3-209ENST00000480222 MACROD1Q9BQ69 325 aa11.95□□□□□ -0.5
SIK3-209ENST00000480222 RTKNQ9BST9 563 aa11.95□□□□□ -0.5
SIK3-209ENST00000480222 FAIM2Q9BWQ8 316 aa11.95□□□□□ -0.5
SIK3-209ENST00000480222 SORBS1Q9BX66 1292 aaKnown RBP11.95□□□□□ -0.5
SIK3-209ENST00000480222 NPLQ9BXD5 320 aaPredicted RBP11.95□□□□□ -0.5
SIK3-209ENST00000480222 ACTR5Q9H9F9 607 aaPredicted RBP11.95□□□□□ -0.5
SIK3-209ENST00000480222 CLK4Q9HAZ1 481 aaKnown RBP11.95□□□□□ -0.5
SIK3-209ENST00000480222 ANKHQ9HCJ1 492 aa11.95□□□□□ -0.5
SIK3-209ENST00000480222 PRDM9Q9NQV7 894 aa11.95□□□□□ -0.5
SIK3-209ENST00000480222 ATAD3AQ9NVI7 634 aa11.95□□□□□ -0.5
SIK3-209ENST00000480222 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.95□□□□□ -0.5
SIK3-209ENST00000480222 IRAK4Q9NWZ3 460 aa11.95□□□□□ -0.5
SIK3-209ENST00000480222 NDE1Q9NXR1 346 aa11.95□□□□□ -0.5
SIK3-209ENST00000480222 BAIAP2L1Q9UHR4 511 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms