RNA–Protein interactions for RNA: ENST00000479933.2

TNFRSF8-204, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best)

Gene TNFRSF8, Length 2,120 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-204ENST00000479933 C11orf65Q8NCR3 313 aa18.37■□□□□ 0.53
TNFRSF8-204ENST00000479933 SIMC1Q8NDZ2 872 aa18.37■□□□□ 0.53
TNFRSF8-204ENST00000479933 GOT1L1Q8NHS2 421 aaPredicted RBP18.37■□□□□ 0.53
TNFRSF8-204ENST00000479933 OR2AG1Q9H205 316 aa18.37■□□□□ 0.53
TNFRSF8-204ENST00000479933 REEP4Q9H6H4 257 aa18.37■□□□□ 0.53
TNFRSF8-204ENST00000479933 TRIM39Q9HCM9 518 aa18.37■□□□□ 0.53
TNFRSF8-204ENST00000479933 SAMHD1Q9Y3Z3 626 aaKnown RBP18.37■□□□□ 0.53
TNFRSF8-204ENST00000479933 hCG_2039718K7EN88 272 aa18.37■□□□□ 0.53
TNFRSF8-204ENST00000479933 UPK1BO75841 260 aa18.37■□□□□ 0.53
TNFRSF8-204ENST00000479933 SOD1P00441 154 aa18.37■□□□□ 0.53
TNFRSF8-204ENST00000479933 IL5RAQ01344 420 aa18.37■□□□□ 0.53
TNFRSF8-204ENST00000479933 FNDC3BQ53EP0 1204 aaKnown RBP18.37■□□□□ 0.53
TNFRSF8-204ENST00000479933 FAAH2Q6GMR7 532 aa18.37■□□□□ 0.53
TNFRSF8-204ENST00000479933 CEP68Q76N32 757 aa18.37■□□□□ 0.53
TNFRSF8-204ENST00000479933 GPR156Q8NFN8 814 aa18.37■□□□□ 0.53
TNFRSF8-204ENST00000479933 OR4A15Q8NGL6 344 aa18.37■□□□□ 0.53
TNFRSF8-204ENST00000479933 UBE2E3Q969T4 207 aa18.37■□□□□ 0.53
TNFRSF8-204ENST00000479933 PPP1R16AQ96I34 528 aa18.37■□□□□ 0.53
TNFRSF8-204ENST00000479933 DPEP2Q9H4A9 486 aa18.37■□□□□ 0.53
TNFRSF8-204ENST00000479933 LTB4R2Q9NPC1 389 aa18.37■□□□□ 0.53
TNFRSF8-204ENST00000479933 SH3BP4Q9P0V3 963 aa18.37■□□□□ 0.53
TNFRSF8-204ENST00000479933 GULP1Q9UBP9 304 aa18.37■□□□□ 0.53
TNFRSF8-204ENST00000479933 WARS2Q9UGM6 360 aaKnown RBP18.37■□□□□ 0.53
TNFRSF8-204ENST00000479933 GPR34Q9UPC5 381 aa18.37■□□□□ 0.53
TNFRSF8-204ENST00000479933 A6NL46 340 aa18.36■□□□□ 0.53
TNFRSF8-204ENST00000479933 SPINT1O43278 529 aa18.36■□□□□ 0.53
TNFRSF8-204ENST00000479933 SUV39H1O43463 412 aa18.36■□□□□ 0.53
TNFRSF8-204ENST00000479933 TLL1O43897 1013 aa18.36■□□□□ 0.53
TNFRSF8-204ENST00000479933 HTR1AP08908 422 aa18.36■□□□□ 0.53
TNFRSF8-204ENST00000479933 IRS1P35568 1242 aa18.36■□□□□ 0.53
TNFRSF8-204ENST00000479933 DAPP51397 102 aa18.36■□□□□ 0.53
TNFRSF8-204ENST00000479933 NKX2-5P52952 324 aaPredicted RBP18.36■□□□□ 0.53
TNFRSF8-204ENST00000479933 COPZ1P61923 177 aa18.36■□□□□ 0.53
TNFRSF8-204ENST00000479933 VLDLRP98155 873 aa18.36■□□□□ 0.53
TNFRSF8-204ENST00000479933 SLBPQ14493 270 aaKnown RBP eCLIP18.36■□□□□ 0.53
TNFRSF8-204ENST00000479933 PCM1Q15154 2024 aa18.36■□□□□ 0.53
TNFRSF8-204ENST00000479933 SF1Q15637 639 aaKnown RBP18.36■□□□□ 0.53
TNFRSF8-204ENST00000479933 HNRNPA1L2Q32P51 320 aaKnown RBP18.36■□□□□ 0.53
TNFRSF8-204ENST00000479933 LRRK1Q38SD2 2015 aa18.36■□□□□ 0.53
TNFRSF8-204ENST00000479933 RAET1GQ6H3X3 334 aa18.36■□□□□ 0.53
TNFRSF8-204ENST00000479933 LAIR2Q6ISS4 152 aa18.36■□□□□ 0.53
TNFRSF8-204ENST00000479933 KIAA1549LQ6ZVL6 1849 aa18.36■□□□□ 0.53
TNFRSF8-204ENST00000479933 VTCN1Q7Z7D3 282 aa18.36■□□□□ 0.53
TNFRSF8-204ENST00000479933 SNX29P2Q8IUI4 249 aa18.36■□□□□ 0.53
TNFRSF8-204ENST00000479933 RHOXF1Q8NHV9 184 aa18.36■□□□□ 0.53
TNFRSF8-204ENST00000479933 SETD7Q8WTS6 366 aaKnown RBP18.36■□□□□ 0.53
TNFRSF8-204ENST00000479933 TTC9Q92623 222 aa18.36■□□□□ 0.53
TNFRSF8-204ENST00000479933 DPH2Q9BQC3 489 aaPredicted RBP18.36■□□□□ 0.53
TNFRSF8-204ENST00000479933 RIBC2Q9H4K1 309 aa18.36■□□□□ 0.53
TNFRSF8-204ENST00000479933 PDP1Q9P0J1 537 aaPredicted RBP18.36■□□□□ 0.53
TNFRSF8-204ENST00000479933 KIF17Q9P2E2 1029 aa18.36■□□□□ 0.53
TNFRSF8-204ENST00000479933 TPRKBQ9Y3C4 175 aa18.36■□□□□ 0.53
TNFRSF8-204ENST00000479933 PCDHGB1Q9Y5G3 927 aa18.36■□□□□ 0.53
TNFRSF8-204ENST00000479933 VEGFDO43915 354 aa18.35■□□□□ 0.53
TNFRSF8-204ENST00000479933 ANGPTL1O95841 491 aa18.35■□□□□ 0.53
TNFRSF8-204ENST00000479933 M6PRP20645 277 aa18.35■□□□□ 0.53
TNFRSF8-204ENST00000479933 HTRA3P83110 453 aa18.35■□□□□ 0.53
TNFRSF8-204ENST00000479933 RAPSNQ13702 412 aa18.35■□□□□ 0.53
TNFRSF8-204ENST00000479933 ELOAQ14241 798 aaKnown RBP18.35■□□□□ 0.53
TNFRSF8-204ENST00000479933 TMC5Q6UXY8 1006 aa18.35■□□□□ 0.53
TNFRSF8-204ENST00000479933 UNC5DQ6UXZ4 953 aa18.35■□□□□ 0.53
TNFRSF8-204ENST00000479933 LYSMD2Q8IV50 215 aa18.35■□□□□ 0.53
TNFRSF8-204ENST00000479933 ETFBKMTQ8IXQ9 262 aa18.35■□□□□ 0.53
TNFRSF8-204ENST00000479933 SLC5A11Q8WWX8 675 aa18.35■□□□□ 0.53
TNFRSF8-204ENST00000479933 MTERF3Q96E29 417 aa18.35■□□□□ 0.53
TNFRSF8-204ENST00000479933 EPYCQ99645 322 aa18.35■□□□□ 0.53
TNFRSF8-204ENST00000479933 DMRT3Q9NQL9 472 aa18.35■□□□□ 0.53
TNFRSF8-204ENST00000479933 CCDC177Q9NQR7 707 aaPredicted RBP18.35■□□□□ 0.53
TNFRSF8-204ENST00000479933 PIPSLA2A3N6 862 aa18.35■□□□□ 0.53
TNFRSF8-204ENST00000479933 LZTS3O60299 673 aaPredicted RBP18.35■□□□□ 0.53
TNFRSF8-204ENST00000479933 MITFO75030 526 aaPredicted RBP18.35■□□□□ 0.53
TNFRSF8-204ENST00000479933 C1QCP02747 245 aa18.35■□□□□ 0.53
TNFRSF8-204ENST00000479933 C9P02748 559 aa18.35■□□□□ 0.53
TNFRSF8-204ENST00000479933 JUNDP17535 347 aa18.35■□□□□ 0.53
TNFRSF8-204ENST00000479933 AGXTP21549 392 aa18.35■□□□□ 0.53
TNFRSF8-204ENST00000479933 PIK3CBP42338 1070 aa18.35■□□□□ 0.53
TNFRSF8-204ENST00000479933 ELAVL3Q14576 367 aaKnown RBP18.35■□□□□ 0.53
TNFRSF8-204ENST00000479933 EIF4HQ15056 248 aaKnown RBP18.35■□□□□ 0.53
TNFRSF8-204ENST00000479933 TCEAL5Q5H9L2 206 aa18.35■□□□□ 0.53
TNFRSF8-204ENST00000479933 DDX59Q5T1V6 619 aaKnown RBP eCLIP18.35■□□□□ 0.53
TNFRSF8-204ENST00000479933 C9orf64Q5T6V5 341 aa18.35■□□□□ 0.53
TNFRSF8-204ENST00000479933 ADNP2Q6IQ32 1131 aa18.35■□□□□ 0.53
TNFRSF8-204ENST00000479933 PDE12Q6L8Q7 609 aaKnown RBP18.35■□□□□ 0.53
TNFRSF8-204ENST00000479933 NXPE4Q6UWF7 544 aa18.35■□□□□ 0.53
TNFRSF8-204ENST00000479933 GALNT5Q7Z7M9 940 aa18.35■□□□□ 0.53
TNFRSF8-204ENST00000479933 C12orf40Q86WS4 652 aa18.35■□□□□ 0.53
TNFRSF8-204ENST00000479933 PUM2Q8TB72 1066 aaKnown RBP eCLIP18.35■□□□□ 0.535e-6■■■■□ 21.5
TNFRSF8-204ENST00000479933 ARRDC3Q96B67 414 aa18.35■□□□□ 0.53
TNFRSF8-204ENST00000479933 ZNF707Q96C28 371 aaPredicted RBP18.35■□□□□ 0.53
TNFRSF8-204ENST00000479933 LRRC3BQ96PB8 259 aa18.35■□□□□ 0.53
TNFRSF8-204ENST00000479933 BTBD2Q9BX70 525 aa18.35■□□□□ 0.53
TNFRSF8-204ENST00000479933 MYNNQ9NPC7 610 aa18.35■□□□□ 0.53
TNFRSF8-204ENST00000479933 SCN3BQ9NY72 215 aa18.35■□□□□ 0.53
TNFRSF8-204ENST00000479933 CXXC1Q9P0U4 656 aaPredicted RBP18.35■□□□□ 0.53
TNFRSF8-204ENST00000479933 PADI2Q9Y2J8 665 aa18.35■□□□□ 0.53
TNFRSF8-204ENST00000479933 GMPPBQ9Y5P6 360 aa18.35■□□□□ 0.53
TNFRSF8-204ENST00000479933 NUP214P35658 2090 aaPredicted RBP18.35■□□□□ 0.53
TNFRSF8-204ENST00000479933 PI15O43692 258 aa18.34■□□□□ 0.53
TNFRSF8-204ENST00000479933 MRPS14O60783 128 aaKnown RBP18.34■□□□□ 0.53
TNFRSF8-204ENST00000479933 KCNK2O95069 426 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms