RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 STATHP02808 62 aa14.6□□□□□ -0.07
C9orf3-217ENST00000479161 PROCP04070 461 aa14.6□□□□□ -0.07
C9orf3-217ENST00000479161 FHP07954 510 aa14.6□□□□□ -0.07
C9orf3-217ENST00000479161 ICAM2P13598 275 aa14.6□□□□□ -0.07
C9orf3-217ENST00000479161 ACPPP15309 386 aa14.6□□□□□ -0.07
C9orf3-217ENST00000479161 CCNG1P51959 295 aa14.6□□□□□ -0.07
C9orf3-217ENST00000479161 MTTPP55157 894 aa14.6□□□□□ -0.07
C9orf3-217ENST00000479161 DNAJB13P59910 316 aa14.6□□□□□ -0.07
C9orf3-217ENST00000479161 MAT1AQ00266 395 aaKnown RBP14.6□□□□□ -0.07
C9orf3-217ENST00000479161 TRAF3Q13114 568 aa14.6□□□□□ -0.07
C9orf3-217ENST00000479161 LY6DQ14210 128 aa14.6□□□□□ -0.07
C9orf3-217ENST00000479161 SYT16Q17RD7 645 aa14.6□□□□□ -0.07
C9orf3-217ENST00000479161 KHDRBS2Q5VWX1 349 aaKnown RBP14.6□□□□□ -0.07
C9orf3-217ENST00000479161 ZYG11AQ6WRX3 759 aa14.6□□□□□ -0.07
C9orf3-217ENST00000479161 QSOX2Q6ZRP7 698 aa14.6□□□□□ -0.07
C9orf3-217ENST00000479161 NDUFAF7Q7L592 441 aa14.6□□□□□ -0.07
C9orf3-217ENST00000479161 HUS1BQ8NHY5 278 aa14.6□□□□□ -0.07
C9orf3-217ENST00000479161 SMAD5Q99717 465 aaKnown RBP14.6□□□□□ -0.07
C9orf3-217ENST00000479161 CENPKQ9BS16 269 aa14.6□□□□□ -0.07
C9orf3-217ENST00000479161 YIPF2Q9BWQ6 316 aa14.6□□□□□ -0.07
C9orf3-217ENST00000479161 TRIM55Q9BYV6 548 aa14.6□□□□□ -0.07
C9orf3-217ENST00000479161 VN1R1Q9GZP7 353 aa14.6□□□□□ -0.07
C9orf3-217ENST00000479161 ZNF700Q9H0M5 742 aa14.6□□□□□ -0.07
C9orf3-217ENST00000479161 LYRM4Q9HD34 91 aa14.6□□□□□ -0.07
C9orf3-217ENST00000479161 PRDM7Q9NQW5 492 aa14.6□□□□□ -0.07
C9orf3-217ENST00000479161 C19orf25Q9UFG5 118 aaPredicted RBP14.6□□□□□ -0.07
C9orf3-217ENST00000479161 EMCNQ9ULC0 261 aa14.6□□□□□ -0.07
C9orf3-217ENST00000479161 MKL2Q9ULH7 1088 aa14.6□□□□□ -0.07
C9orf3-217ENST00000479161 EIF4E1BA6NMX2 242 aaKnown RBP14.59□□□□□ -0.07
C9orf3-217ENST00000479161 G3V2L1 256 aa14.59□□□□□ -0.07
C9orf3-217ENST00000479161 COPEO14579 308 aa14.59□□□□□ -0.07
C9orf3-217ENST00000479161 B3GALT2O43825 422 aa14.59□□□□□ -0.07
C9orf3-217ENST00000479161 SEMA3DO95025 777 aa14.59□□□□□ -0.07
C9orf3-217ENST00000479161 C8orf89P0DMQ9 161 aa14.59□□□□□ -0.07
C9orf3-217ENST00000479161 RAB8AP61006 207 aa14.59□□□□□ -0.07
C9orf3-217ENST00000479161 RHAGQ02094 409 aa14.59□□□□□ -0.07
C9orf3-217ENST00000479161 CLCQ05315 142 aa14.59□□□□□ -0.07
C9orf3-217ENST00000479161 MYBPC3Q14896 1274 aa14.59□□□□□ -0.07
C9orf3-217ENST00000479161 FRG2Q64ET8 278 aa14.59□□□□□ -0.07
C9orf3-217ENST00000479161 RIPOR1Q6ZS17 1223 aa14.59□□□□□ -0.07
C9orf3-217ENST00000479161 MILR1Q7Z6M3 343 aa14.59□□□□□ -0.07
C9orf3-217ENST00000479161 BANPQ8N9N5 519 aa14.59□□□□□ -0.07
C9orf3-217ENST00000479161 OR52B6Q8NGF0 335 aa14.59□□□□□ -0.07
C9orf3-217ENST00000479161 OR2W6PQ8NHA6 318 aa14.59□□□□□ -0.07
C9orf3-217ENST00000479161 METTL21AQ8WXB1 218 aa14.59□□□□□ -0.07
C9orf3-217ENST00000479161 ATP6V1E2Q96A05 226 aa14.59□□□□□ -0.07
C9orf3-217ENST00000479161 FRG2BQ96QU4 278 aa14.59□□□□□ -0.07
C9orf3-217ENST00000479161 ZNF382Q96SR6 550 aa14.59□□□□□ -0.07
C9orf3-217ENST00000479161 DMRT3Q9NQL9 472 aa14.59□□□□□ -0.07
C9orf3-217ENST00000479161 RIC8BQ9NVN3 520 aa14.59□□□□□ -0.07
C9orf3-217ENST00000479161 TRPS1Q9UHF7 1281 aa14.59□□□□□ -0.07
C9orf3-217ENST00000479161 FBXL4Q9UKA2 621 aa14.59□□□□□ -0.07
C9orf3-217ENST00000479161 RNF11Q9Y3C5 154 aa14.59□□□□□ -0.07
C9orf3-217ENST00000479161 MMACHCQ9Y4U1 282 aa14.59□□□□□ -0.07
C9orf3-217ENST00000479161 IGHV1-45A0A0A0MS14 117 aa14.58□□□□□ -0.08
C9orf3-217ENST00000479161 TLDC2A0PJX2 215 aa14.58□□□□□ -0.08
C9orf3-217ENST00000479161 C4orf51C9J302 202 aa14.58□□□□□ -0.08
C9orf3-217ENST00000479161 ERLIN1O75477 346 aa14.58□□□□□ -0.08
C9orf3-217ENST00000479161 MYL2P10916 166 aa14.58□□□□□ -0.08
C9orf3-217ENST00000479161 COX6A1P12074 109 aa14.58□□□□□ -0.08
C9orf3-217ENST00000479161 PKNOX1P55347 436 aa14.58□□□□□ -0.08
C9orf3-217ENST00000479161 BTN3A2P78410 334 aa14.58□□□□□ -0.08
C9orf3-217ENST00000479161 ZRSR2Q15696 482 aaKnown RBP14.58□□□□□ -0.08
C9orf3-217ENST00000479161 CPSF6Q16630 551 aaKnown RBP eCLIP14.58□□□□□ -0.08
C9orf3-217ENST00000479161 LACTB2Q53H82 288 aaPredicted RBP14.58□□□□□ -0.08
C9orf3-217ENST00000479161 UNC50Q53HI1 259 aa14.58□□□□□ -0.08
C9orf3-217ENST00000479161 CPZQ66K79 652 aa14.58□□□□□ -0.08
C9orf3-217ENST00000479161 JMJD6Q6NYC1 403 aaPredicted RBP14.58□□□□□ -0.08
C9orf3-217ENST00000479161 IGFL3Q6UXB1 125 aa14.58□□□□□ -0.08
C9orf3-217ENST00000479161 SHISA6Q6ZSJ9 500 aa14.58□□□□□ -0.08
C9orf3-217ENST00000479161 UBE3DQ7Z6J8 389 aa14.58□□□□□ -0.08
C9orf3-217ENST00000479161 TMEM151BQ8IW70 566 aa14.58□□□□□ -0.08
C9orf3-217ENST00000479161 CA13Q8N1Q1 262 aa14.58□□□□□ -0.08
C9orf3-217ENST00000479161 ZCCHC7Q8N3Z6 543 aaKnown RBP14.58□□□□□ -0.08
C9orf3-217ENST00000479161 GALNT16Q8N428 558 aa14.58□□□□□ -0.08
C9orf3-217ENST00000479161 CCT6BQ92526 530 aa14.58□□□□□ -0.08
C9orf3-217ENST00000479161 RGMAQ96B86 450 aa14.58□□□□□ -0.08
C9orf3-217ENST00000479161 PEX11GQ96HA9 241 aa14.58□□□□□ -0.08
C9orf3-217ENST00000479161 IMMP1LQ96LU5 166 aa14.58□□□□□ -0.08
C9orf3-217ENST00000479161 F2RL3Q96RI0 385 aa14.58□□□□□ -0.08
C9orf3-217ENST00000479161 TUBB6Q9BUF5 446 aa14.58□□□□□ -0.08
C9orf3-217ENST00000479161 SLC25A23Q9BV35 468 aa14.58□□□□□ -0.08
C9orf3-217ENST00000479161 SEMA4CQ9C0C4 833 aa14.58□□□□□ -0.08
C9orf3-217ENST00000479161 BRF2Q9HAW0 419 aa14.58□□□□□ -0.08
C9orf3-217ENST00000479161 MS4A12Q9NXJ0 267 aa14.58□□□□□ -0.08
C9orf3-217ENST00000479161 GPR83Q9NYM4 423 aa14.58□□□□□ -0.08
C9orf3-217ENST00000479161 HCN3Q9P1Z3 774 aa14.58□□□□□ -0.08
C9orf3-217ENST00000479161 DAPP1Q9UN19 280 aa14.58□□□□□ -0.08
C9orf3-217ENST00000479161 PLAAQ9Y263 795 aa14.58□□□□□ -0.08
C9orf3-217ENST00000479161 PLLPQ9Y342 182 aa14.58□□□□□ -0.08
C9orf3-217ENST00000479161 ZNF451Q9Y4E5 1061 aa14.58□□□□□ -0.08
C9orf3-217ENST00000479161 IGKV3D-11A0A0A0MRZ8 115 aa14.57□□□□□ -0.08
C9orf3-217ENST00000479161 SMIM23A6NLE4 172 aa14.57□□□□□ -0.08
C9orf3-217ENST00000479161 PSMD12O00232 456 aaPredicted RBP14.57□□□□□ -0.08
C9orf3-217ENST00000479161 CDK2AP1O14519 115 aa14.57□□□□□ -0.08
C9orf3-217ENST00000479161 SUPT7LO94864 414 aa14.57□□□□□ -0.08
C9orf3-217ENST00000479161 ALPPP05187 535 aa14.57□□□□□ -0.08
C9orf3-217ENST00000479161 PCNAP12004 261 aa14.57□□□□□ -0.08
C9orf3-217ENST00000479161 HIST1H1TP22492 207 aaPredicted RBP14.57□□□□□ -0.08
C9orf3-217ENST00000479161 ATP5A1P25705 553 aaKnown RBP14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms