RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 UBFD1O14562 309 aaKnown RBP25.34■■□□□ 1.65
CCM2-211ENST00000478582 ERI3O43414 337 aaKnown RBP25.34■■□□□ 1.65
CCM2-211ENST00000478582 TGFB1P01137 390 aa25.34■■□□□ 1.65
CCM2-211ENST00000478582 ENO1P06733 434 aaKnown RBP25.34■■□□□ 1.65
CCM2-211ENST00000478582 PTX3P26022 381 aaPredicted RBP25.34■■□□□ 1.65
CCM2-211ENST00000478582 SERPINB4P48594 390 aa25.34■■□□□ 1.65
CCM2-211ENST00000478582 ARFIP1P53367 373 aa25.34■■□□□ 1.65
CCM2-211ENST00000478582 IFT88Q13099 833 aa25.34■■□□□ 1.65
CCM2-211ENST00000478582 DDX39BQ13838 428 aaKnown RBP25.34■■□□□ 1.65
CCM2-211ENST00000478582 KHDRBS2Q5VWX1 349 aaKnown RBP25.34■■□□□ 1.65
CCM2-211ENST00000478582 TTC19Q6DKK2 380 aaPredicted RBP25.34■■□□□ 1.65
CCM2-211ENST00000478582 TRIM40Q6P9F5 258 aa25.34■■□□□ 1.65
CCM2-211ENST00000478582 OR6Y1Q8NGX8 325 aa25.34■■□□□ 1.65
CCM2-211ENST00000478582 STT3BQ8TCJ2 826 aa25.34■■□□□ 1.65
CCM2-211ENST00000478582 SREK1Q8WXA9 508 aaKnown RBP25.34■■□□□ 1.65
CCM2-211ENST00000478582 ARL8AQ96BM9 186 aa25.34■■□□□ 1.65
CCM2-211ENST00000478582 FAR2Q96K12 515 aa25.34■■□□□ 1.65
CCM2-211ENST00000478582 QRFPRQ96P65 431 aa25.34■■□□□ 1.65
CCM2-211ENST00000478582 PTRH2Q9Y3E5 179 aaKnown RBP25.34■■□□□ 1.65
CCM2-211ENST00000478582 A0A088AWK7 358 aa25.33■■□□□ 1.65
CCM2-211ENST00000478582 UQCRHLA0A096LP55 91 aa25.33■■□□□ 1.65
CCM2-211ENST00000478582 FFAR3O14843 346 aa25.33■■□□□ 1.65
CCM2-211ENST00000478582 BIRC5O15392 142 aa25.33■■□□□ 1.65
CCM2-211ENST00000478582 GPR42O15529 346 aa25.33■■□□□ 1.65
CCM2-211ENST00000478582 NPHS1O60500 1241 aa25.33■■□□□ 1.65
CCM2-211ENST00000478582 RDH16O75452 317 aa25.33■■□□□ 1.65
CCM2-211ENST00000478582 UQCRHP07919 91 aa25.33■■□□□ 1.65
CCM2-211ENST00000478582 ZNF10P21506 573 aaPredicted RBP25.33■■□□□ 1.65
CCM2-211ENST00000478582 FOLR3P41439 243 aa25.33■■□□□ 1.65
CCM2-211ENST00000478582 CCR10P46092 362 aa25.33■■□□□ 1.65
CCM2-211ENST00000478582 NEK2P51955 445 aa25.33■■□□□ 1.65
CCM2-211ENST00000478582 RPS13P62277 151 aaKnown RBP25.33■■□□□ 1.65
CCM2-211ENST00000478582 CUL3Q13618 768 aa25.33■■□□□ 1.65
CCM2-211ENST00000478582 SSPNQ14714 243 aa25.33■■□□□ 1.65
CCM2-211ENST00000478582 UGT8Q16880 541 aa25.33■■□□□ 1.65
CCM2-211ENST00000478582 UBE3DQ7Z6J8 389 aa25.33■■□□□ 1.65
CCM2-211ENST00000478582 RNF175Q8N4F7 328 aa25.33■■□□□ 1.65
CCM2-211ENST00000478582 CDYL2Q8N8U2 506 aa25.33■■□□□ 1.65
CCM2-211ENST00000478582 MIEF2Q96C03 454 aa25.33■■□□□ 1.65
CCM2-211ENST00000478582 TBCDQ9BTW9 1192 aa25.33■■□□□ 1.65
CCM2-211ENST00000478582 PIEZO2Q9H5I5 2752 aa25.33■■□□□ 1.65
CCM2-211ENST00000478582 ELOVL6Q9H5J4 265 aa25.33■■□□□ 1.65
CCM2-211ENST00000478582 MID1IP1Q9NPA3 183 aa25.33■■□□□ 1.65
CCM2-211ENST00000478582 PRDM7Q9NQW5 492 aa25.33■■□□□ 1.65
CCM2-211ENST00000478582 C14orf105Q9NVL8 296 aa25.33■■□□□ 1.65
CCM2-211ENST00000478582 B3GALT4O96024 378 aa25.32■■□□□ 1.64
CCM2-211ENST00000478582 ZGLP1P0C6A0 271 aa25.32■■□□□ 1.64
CCM2-211ENST00000478582 ATXN8OSP0DMR3 200 aa25.32■■□□□ 1.64
CCM2-211ENST00000478582 IL10P22301 178 aa25.32■■□□□ 1.64
CCM2-211ENST00000478582 PLA2G16P53816 162 aa25.32■■□□□ 1.64
CCM2-211ENST00000478582 BTN3A2P78410 334 aa25.32■■□□□ 1.64
CCM2-211ENST00000478582 MAT1AQ00266 395 aaKnown RBP25.32■■□□□ 1.64
CCM2-211ENST00000478582 ZNF33BQ06732 778 aa25.32■■□□□ 1.64
CCM2-211ENST00000478582 GALNT1Q10472 559 aaPredicted RBP25.32■■□□□ 1.64
CCM2-211ENST00000478582 SYT16Q17RD7 645 aa25.32■■□□□ 1.64
CCM2-211ENST00000478582 ZNF605Q86T29 641 aa25.32■■□□□ 1.64
CCM2-211ENST00000478582 NUDCD3Q8IVD9 361 aa25.32■■□□□ 1.64
CCM2-211ENST00000478582 OR51Q1Q8NH59 317 aa25.32■■□□□ 1.64
CCM2-211ENST00000478582 METTL6Q8TCB7 284 aa25.32■■□□□ 1.64
CCM2-211ENST00000478582 ADAMTS17Q8TE56 1095 aa25.32■■□□□ 1.64
CCM2-211ENST00000478582 ATP6V1G3Q96LB4 118 aa25.32■■□□□ 1.64
CCM2-211ENST00000478582 KCNC2Q96PR1 638 aa25.32■■□□□ 1.64
CCM2-211ENST00000478582 NPLQ9BXD5 320 aaPredicted RBP25.32■■□□□ 1.64
CCM2-211ENST00000478582 ROGDIQ9GZN7 287 aa25.32■■□□□ 1.64
CCM2-211ENST00000478582 ADNPQ9H2P0 1102 aa25.32■■□□□ 1.64
CCM2-211ENST00000478582 OR51B5Q9H339 312 aa25.32■■□□□ 1.64
CCM2-211ENST00000478582 FASNP49327 2511 aaKnown RBP25.31■■□□□ 1.64
CCM2-211ENST00000478582 TMEM120BA0PK00 339 aa25.31■■□□□ 1.64
CCM2-211ENST00000478582 B8ZZF3 427 aa25.31■■□□□ 1.64
CCM2-211ENST00000478582 SASH3O75995 380 aa25.31■■□□□ 1.64
CCM2-211ENST00000478582 KRT6AP02538 564 aa25.31■■□□□ 1.64
CCM2-211ENST00000478582 KRT6BP04259 564 aa25.31■■□□□ 1.64
CCM2-211ENST00000478582 UMODP07911 640 aa25.31■■□□□ 1.64
CCM2-211ENST00000478582 SERPINB5P36952 375 aa25.31■■□□□ 1.64
CCM2-211ENST00000478582 TSFMP43897 325 aaKnown RBP25.31■■□□□ 1.64
CCM2-211ENST00000478582 KRT6CP48668 564 aa25.31■■□□□ 1.64
CCM2-211ENST00000478582 IL10RAQ13651 578 aa25.31■■□□□ 1.64
CCM2-211ENST00000478582 ERV3-1Q14264 604 aa25.31■■□□□ 1.64
CCM2-211ENST00000478582 DEFB109BQ30KR1 87 aa25.31■■□□□ 1.64
CCM2-211ENST00000478582 VWA2Q5GFL6 755 aa25.31■■□□□ 1.64
CCM2-211ENST00000478582 ATP1A1-AS1Q5TC04 95 aa25.31■■□□□ 1.64
CCM2-211ENST00000478582 ZC3H7AQ8IWR0 971 aaKnown RBP25.31■■□□□ 1.64
CCM2-211ENST00000478582 NACC2Q96BF6 587 aa25.31■■□□□ 1.64
CCM2-211ENST00000478582 MTFMTQ96DP5 389 aaKnown RBP25.31■■□□□ 1.64
CCM2-211ENST00000478582 SERPINI1Q99574 410 aa25.31■■□□□ 1.64
CCM2-211ENST00000478582 CENPKQ9BS16 269 aa25.31■■□□□ 1.64
CCM2-211ENST00000478582 YIPF2Q9BWQ6 316 aa25.31■■□□□ 1.64
CCM2-211ENST00000478582 BRF2Q9HAW0 419 aa25.31■■□□□ 1.64
CCM2-211ENST00000478582 HCN3Q9P1Z3 774 aa25.31■■□□□ 1.64
CCM2-211ENST00000478582 ZNF860A6NHJ4 632 aa25.3■■□□□ 1.64
CCM2-211ENST00000478582 MANBAO00462 879 aa25.3■■□□□ 1.64
CCM2-211ENST00000478582 CHST10O43529 356 aa25.3■■□□□ 1.64
CCM2-211ENST00000478582 DNAJB6O75190 326 aa25.3■■□□□ 1.64
CCM2-211ENST00000478582 SCELO95171 688 aa25.3■■□□□ 1.64
CCM2-211ENST00000478582 BMP10O95393 424 aa25.3■■□□□ 1.64
CCM2-211ENST00000478582 PDYNP01213 254 aa25.3■■□□□ 1.64
CCM2-211ENST00000478582 HMOX2P30519 316 aa25.3■■□□□ 1.64
CCM2-211ENST00000478582 MTTPP55157 894 aa25.3■■□□□ 1.64
CCM2-211ENST00000478582 POLE2P56282 527 aa25.3■■□□□ 1.64
CCM2-211ENST00000478582 KLC1Q07866 573 aa25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms