RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 SLC22A2O15244 555 aa3.62□□□□□ -1.83
CDC42BPA-212ENST00000478573 ST8SIA3O43173 380 aa3.62□□□□□ -1.83
CDC42BPA-212ENST00000478573 IGKV5-2P06315 115 aa3.62□□□□□ -1.83
CDC42BPA-212ENST00000478573 FRMD6-AS1P0C7T7 363 aa3.62□□□□□ -1.83
CDC42BPA-212ENST00000478573 LBPP18428 481 aa3.62□□□□□ -1.83
CDC42BPA-212ENST00000478573 CDH3P22223 829 aa3.62□□□□□ -1.83
CDC42BPA-212ENST00000478573 CD27P26842 260 aa3.62□□□□□ -1.83
CDC42BPA-212ENST00000478573 KCNJ1P48048 391 aa3.62□□□□□ -1.83
CDC42BPA-212ENST00000478573 SNU13P55769 128 aaKnown RBP3.62□□□□□ -1.83
CDC42BPA-212ENST00000478573 CACNG1Q06432 222 aa3.62□□□□□ -1.83
CDC42BPA-212ENST00000478573 SULT2A1Q06520 285 aa3.62□□□□□ -1.83
CDC42BPA-212ENST00000478573 RASGEF1BQ0VAM2 473 aa3.62□□□□□ -1.83
CDC42BPA-212ENST00000478573 SMU1Q2TAY7 513 aa3.62□□□□□ -1.83
CDC42BPA-212ENST00000478573 KBTBD12Q3ZCT8 623 aa3.62□□□□□ -1.83
CDC42BPA-212ENST00000478573 ZC2HC1CQ53FD0 456 aaPredicted RBP3.62□□□□□ -1.83
CDC42BPA-212ENST00000478573 WDR38Q5JTN6 314 aa3.62□□□□□ -1.83
CDC42BPA-212ENST00000478573 SLC35D3Q5M8T2 416 aa3.62□□□□□ -1.83
CDC42BPA-212ENST00000478573 LYSMD4Q5XG99 296 aa3.62□□□□□ -1.83
CDC42BPA-212ENST00000478573 CASC4Q6P4E1 433 aa3.62□□□□□ -1.83
CDC42BPA-212ENST00000478573 ARHGAP11AQ6P4F7 1023 aa3.62□□□□□ -1.83
CDC42BPA-212ENST00000478573 CYB5D1Q6P9G0 228 aa3.62□□□□□ -1.83
CDC42BPA-212ENST00000478573 BTNL8Q6UX41 500 aa3.62□□□□□ -1.83
CDC42BPA-212ENST00000478573 ISCA2Q86U28 154 aa3.62□□□□□ -1.83
CDC42BPA-212ENST00000478573 RTN4RL2Q86UN3 420 aa3.62□□□□□ -1.83
CDC42BPA-212ENST00000478573 MYPOPQ86VE0 399 aaPredicted RBP3.62□□□□□ -1.83
CDC42BPA-212ENST00000478573 SPEM1Q8N4L4 309 aa3.62□□□□□ -1.83
CDC42BPA-212ENST00000478573 C10orf53Q8N6V4 93 aa3.62□□□□□ -1.83
CDC42BPA-212ENST00000478573 MSANTD4Q8NCY6 345 aa3.62□□□□□ -1.83
CDC42BPA-212ENST00000478573 ALG14Q96F25 216 aa3.62□□□□□ -1.83
CDC42BPA-212ENST00000478573 BSCL2Q96G97 398 aaPredicted RBP3.62□□□□□ -1.83
CDC42BPA-212ENST00000478573 AK8Q96MA6 479 aa3.62□□□□□ -1.83
CDC42BPA-212ENST00000478573 GDAP1L1Q96MZ0 367 aa3.62□□□□□ -1.83
CDC42BPA-212ENST00000478573 RHNO1Q9BSD3 238 aa3.62□□□□□ -1.83
CDC42BPA-212ENST00000478573 URM1Q9BTM9 101 aaKnown RBP3.62□□□□□ -1.83
CDC42BPA-212ENST00000478573 MRPL9Q9BYD2 267 aaKnown RBP3.62□□□□□ -1.83
CDC42BPA-212ENST00000478573 BARHL1Q9BZE3 327 aa3.62□□□□□ -1.83
CDC42BPA-212ENST00000478573 OR2B2Q9GZK3 357 aa3.62□□□□□ -1.83
CDC42BPA-212ENST00000478573 SNX25Q9H3E2 840 aa3.62□□□□□ -1.83
CDC42BPA-212ENST00000478573 CPVLQ9H3G5 476 aa3.62□□□□□ -1.83
CDC42BPA-212ENST00000478573 MMADHCQ9H3L0 296 aaPredicted RBP3.62□□□□□ -1.83
CDC42BPA-212ENST00000478573 CNIH4Q9P003 139 aa3.62□□□□□ -1.83
CDC42BPA-212ENST00000478573 PARP14Q460N5 1801 aa3.62□□□□□ -1.83
CDC42BPA-212ENST00000478573 KIF16BQ96L93 1317 aa3.62□□□□□ -1.83
CDC42BPA-212ENST00000478573 FRMPD3Q5JV73 1810 aa3.61□□□□□ -1.83
CDC42BPA-212ENST00000478573 LRRD1A4D1F6 860 aa3.61□□□□□ -1.83
CDC42BPA-212ENST00000478573 F8VVB4 439 aa3.61□□□□□ -1.83
CDC42BPA-212ENST00000478573 F8VWA3 439 aa3.61□□□□□ -1.83
CDC42BPA-212ENST00000478573 SLC16A8O95907 504 aa3.61□□□□□ -1.83
CDC42BPA-212ENST00000478573 RNF224P0DH78 156 aa3.61□□□□□ -1.83
CDC42BPA-212ENST00000478573 ITIH1P19827 911 aa3.61□□□□□ -1.83
CDC42BPA-212ENST00000478573 RPS12P25398 132 aaKnown RBP3.61□□□□□ -1.83
CDC42BPA-212ENST00000478573 ALDH4A1P30038 563 aa3.61□□□□□ -1.83
CDC42BPA-212ENST00000478573 IER3P46695 156 aa3.61□□□□□ -1.83
CDC42BPA-212ENST00000478573 STX1BP61266 288 aa3.61□□□□□ -1.83
CDC42BPA-212ENST00000478573 HERV-K104P61576 105 aa3.61□□□□□ -1.83
CDC42BPA-212ENST00000478573 ST8SIA6P61647 398 aa3.61□□□□□ -1.83
CDC42BPA-212ENST00000478573 PMP22Q01453 160 aa3.61□□□□□ -1.83
CDC42BPA-212ENST00000478573 GCKRQ14397 625 aa3.61□□□□□ -1.83
CDC42BPA-212ENST00000478573 NONOQ15233 471 aaKnown RBP eCLIP3.61□□□□□ -1.83
CDC42BPA-212ENST00000478573 RBBP7Q16576 425 aa3.61□□□□□ -1.83
CDC42BPA-212ENST00000478573 FUT11Q495W5 492 aa3.61□□□□□ -1.83
CDC42BPA-212ENST00000478573 FAM166AQ6J272 317 aa3.61□□□□□ -1.83
CDC42BPA-212ENST00000478573 GPR141Q7Z602 305 aa3.61□□□□□ -1.83
CDC42BPA-212ENST00000478573 CREBRFQ8IUR6 639 aa3.61□□□□□ -1.83
CDC42BPA-212ENST00000478573 CDK20Q8IZL9 346 aa3.61□□□□□ -1.83
CDC42BPA-212ENST00000478573 APCDD1Q8J025 514 aa3.61□□□□□ -1.83
CDC42BPA-212ENST00000478573 DNAJC22Q8N4W6 341 aa3.61□□□□□ -1.83
CDC42BPA-212ENST00000478573 ZNF248Q8NDW4 579 aa3.61□□□□□ -1.83
CDC42BPA-212ENST00000478573 SLC26A7Q8TE54 656 aa3.61□□□□□ -1.83
CDC42BPA-212ENST00000478573 FCAMRQ8WWV6 532 aa3.61□□□□□ -1.83
CDC42BPA-212ENST00000478573 PYCR2Q96C36 320 aa3.61□□□□□ -1.83
CDC42BPA-212ENST00000478573 PGM2Q96G03 612 aa3.61□□□□□ -1.83
CDC42BPA-212ENST00000478573 NSL1Q96IY1 281 aa3.61□□□□□ -1.83
CDC42BPA-212ENST00000478573 PSD2Q9BQI7 771 aa3.61□□□□□ -1.83
CDC42BPA-212ENST00000478573 RBM4Q9BWF3 364 aaKnown RBP3.61□□□□□ -1.83
CDC42BPA-212ENST00000478573 CHST11Q9NPF2 352 aa3.61□□□□□ -1.83
CDC42BPA-212ENST00000478573 FAM207AQ9NSI2 230 aaPredicted RBP3.61□□□□□ -1.83
CDC42BPA-212ENST00000478573 ADPRHL2Q9NX46 363 aa3.61□□□□□ -1.83
CDC42BPA-212ENST00000478573 PKD2L2Q9NZM6 624 aa3.61□□□□□ -1.83
CDC42BPA-212ENST00000478573 PA2G4Q9UQ80 394 aaKnown RBP3.61□□□□□ -1.83
CDC42BPA-212ENST00000478573 MYO3BQ8WXR4 1341 aa3.61□□□□□ -1.83
CDC42BPA-212ENST00000478573 CNTNAP1P78357 1384 aa3.61□□□□□ -1.83
CDC42BPA-212ENST00000478573 LAMA4Q16363 1823 aa3.6□□□□□ -1.83
CDC42BPA-212ENST00000478573 BAZ2AQ9UIF9 1905 aaKnown RBP3.6□□□□□ -1.83
CDC42BPA-212ENST00000478573 A0A0B4J203 849 aa3.6□□□□□ -1.83
CDC42BPA-212ENST00000478573 IGHV4-61A0A0C4DH41 118 aa3.6□□□□□ -1.83
CDC42BPA-212ENST00000478573 ILVBLA1L0T0 632 aa3.6□□□□□ -1.83
CDC42BPA-212ENST00000478573 TMEM150CB9EJG8 249 aa3.6□□□□□ -1.83
CDC42BPA-212ENST00000478573 KBTBD13C9JR72 458 aa3.6□□□□□ -1.83
CDC42BPA-212ENST00000478573 DFFBO76075 338 aa3.6□□□□□ -1.83
CDC42BPA-212ENST00000478573 BAG3O95817 575 aa3.6□□□□□ -1.83
CDC42BPA-212ENST00000478573 IGHV4-59P01825 116 aa3.6□□□□□ -1.83
CDC42BPA-212ENST00000478573 SERPING1P05155 500 aa3.6□□□□□ -1.83
CDC42BPA-212ENST00000478573 ITGA3P26006 1051 aa3.6□□□□□ -1.83
CDC42BPA-212ENST00000478573 CCND3P30281 292 aaPredicted RBP3.6□□□□□ -1.83
CDC42BPA-212ENST00000478573 CSTF2P33240 577 aaKnown RBP eCLIP3.6□□□□□ -1.83
CDC42BPA-212ENST00000478573 EPHX2P34913 555 aa3.6□□□□□ -1.83
CDC42BPA-212ENST00000478573 CASP3P42574 277 aa3.6□□□□□ -1.83
CDC42BPA-212ENST00000478573 NKX2-1P43699 371 aaPredicted RBP3.6□□□□□ -1.83
CDC42BPA-212ENST00000478573 KHKP50053 298 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms