RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 CLEC3AO75596 197 aa4.76□□□□□ -1.65
SF3B6-202ENST00000478050 SEC14L2O76054 403 aa4.76□□□□□ -1.65
SF3B6-202ENST00000478050 PRKD3O94806 890 aa4.76□□□□□ -1.65
SF3B6-202ENST00000478050 MYO1DO94832 1006 aa4.76□□□□□ -1.65
SF3B6-202ENST00000478050 CCNDBP1O95273 360 aa4.76□□□□□ -1.65
SF3B6-202ENST00000478050 FGF19O95750 216 aa4.76□□□□□ -1.65
SF3B6-202ENST00000478050 CLIC3O95833 236 aa4.76□□□□□ -1.65
SF3B6-202ENST00000478050 FTH1P02794 183 aa4.76□□□□□ -1.65
SF3B6-202ENST00000478050 MT-ND1P03886 318 aa4.76□□□□□ -1.65
SF3B6-202ENST00000478050 GSTM1P09488 218 aa4.76□□□□□ -1.65
SF3B6-202ENST00000478050 CTSAP10619 480 aa4.76□□□□□ -1.65
SF3B6-202ENST00000478050 ITGAMP11215 1152 aa4.76□□□□□ -1.65
SF3B6-202ENST00000478050 PCNAP12004 261 aa4.76□□□□□ -1.65
SF3B6-202ENST00000478050 HSD3B1P14060 373 aa4.76□□□□□ -1.65
SF3B6-202ENST00000478050 ATP1B2P14415 290 aaPredicted RBP4.76□□□□□ -1.65
SF3B6-202ENST00000478050 JUPP14923 745 aa4.76□□□□□ -1.65
SF3B6-202ENST00000478050 AMD1P17707 334 aa4.76□□□□□ -1.65
SF3B6-202ENST00000478050 SDC1P18827 310 aa4.76□□□□□ -1.65
SF3B6-202ENST00000478050 EPORP19235 508 aa4.76□□□□□ -1.65
SF3B6-202ENST00000478050 PRPS1L1P21108 318 aa4.76□□□□□ -1.65
SF3B6-202ENST00000478050 LHCGRP22888 699 aa4.76□□□□□ -1.65
SF3B6-202ENST00000478050 EEF1B2P24534 225 aaKnown RBP4.76□□□□□ -1.65
SF3B6-202ENST00000478050 DDX6P26196 483 aaKnown RBP eCLIP4.76□□□□□ -1.65
SF3B6-202ENST00000478050 GSTM2P28161 218 aa4.76□□□□□ -1.65
SF3B6-202ENST00000478050 VIPR1P32241 457 aa4.76□□□□□ -1.65
SF3B6-202ENST00000478050 SHMT2P34897 504 aa4.76□□□□□ -1.65
SF3B6-202ENST00000478050 RECQLP46063 649 aaPredicted RBP4.76□□□□□ -1.65
SF3B6-202ENST00000478050 STK19P49842 368 aaPredicted RBP4.76□□□□□ -1.65
SF3B6-202ENST00000478050 PNLIPRP1P54315 467 aa4.76□□□□□ -1.65
SF3B6-202ENST00000478050 TMBIM6P55061 237 aa4.76□□□□□ -1.65
SF3B6-202ENST00000478050 C21orf58P58505 322 aa4.76□□□□□ -1.65
SF3B6-202ENST00000478050 PPP2R2BQ00005 443 aa4.76□□□□□ -1.65
SF3B6-202ENST00000478050 B4GALNT1Q00973 533 aa4.76□□□□□ -1.65
SF3B6-202ENST00000478050 PLIN5Q00G26 463 aa4.76□□□□□ -1.65
SF3B6-202ENST00000478050 MTAPQ13126 283 aa4.76□□□□□ -1.65
SF3B6-202ENST00000478050 PMS2P3Q13401 168 aa4.76□□□□□ -1.65
SF3B6-202ENST00000478050 DUOXA1Q1HG43 343 aa4.76□□□□□ -1.65
SF3B6-202ENST00000478050 PTCHD3Q3KNS1 767 aa4.76□□□□□ -1.65
SF3B6-202ENST00000478050 ZIK1Q3SY52 487 aaPredicted RBP4.76□□□□□ -1.65
SF3B6-202ENST00000478050 ATP13A5Q4VNC0 1218 aa4.76□□□□□ -1.65
SF3B6-202ENST00000478050 LIPJQ5W064 366 aa4.76□□□□□ -1.65
SF3B6-202ENST00000478050 FRG2Q64ET8 278 aa4.76□□□□□ -1.65
SF3B6-202ENST00000478050 SLC6A19Q695T7 634 aa4.76□□□□□ -1.65
SF3B6-202ENST00000478050 SHQ1Q6PI26 577 aaKnown RBP4.76□□□□□ -1.65
SF3B6-202ENST00000478050 BRAT1Q6PJG6 821 aa4.76□□□□□ -1.65
SF3B6-202ENST00000478050 GDPD4Q6W3E5 623 aa4.76□□□□□ -1.65
SF3B6-202ENST00000478050 MBOAT1Q6ZNC8 495 aa4.76□□□□□ -1.65
SF3B6-202ENST00000478050 GCNT7Q6ZNI0 430 aa4.76□□□□□ -1.65
SF3B6-202ENST00000478050 EP400NLQ6ZTU2 488 aa4.76□□□□□ -1.65
SF3B6-202ENST00000478050 TMEM26Q6ZUK4 368 aa4.76□□□□□ -1.65
SF3B6-202ENST00000478050 GAREM2Q75VX8 874 aa4.76□□□□□ -1.65
SF3B6-202ENST00000478050 SERPINA11Q86U17 422 aa4.76□□□□□ -1.65
SF3B6-202ENST00000478050 SETD9Q8NE22 299 aa4.76□□□□□ -1.65
SF3B6-202ENST00000478050 OR13F1Q8NGS4 319 aa4.76□□□□□ -1.65
SF3B6-202ENST00000478050 CLHC1Q8NHS4 586 aa4.76□□□□□ -1.65
SF3B6-202ENST00000478050 ASZ1Q8WWH4 475 aa4.76□□□□□ -1.65
SF3B6-202ENST00000478050 ATL1Q8WXF7 558 aa4.76□□□□□ -1.65
SF3B6-202ENST00000478050 AUTS2Q8WXX7 1259 aa4.76□□□□□ -1.65
SF3B6-202ENST00000478050 PPP1R14BQ96C90 147 aa4.76□□□□□ -1.65
SF3B6-202ENST00000478050 FBXL8Q96CD0 374 aa4.76□□□□□ -1.65
SF3B6-202ENST00000478050 PYURFQ96I23 114 aa4.76□□□□□ -1.65
SF3B6-202ENST00000478050 RPL10LQ96L21 214 aaKnown RBP4.76□□□□□ -1.65
SF3B6-202ENST00000478050 CCDC74BQ96LY2 380 aa4.76□□□□□ -1.65
SF3B6-202ENST00000478050 COG8Q96MW5 612 aa4.76□□□□□ -1.65
SF3B6-202ENST00000478050 MUS81Q96NY9 551 aa4.76□□□□□ -1.65
SF3B6-202ENST00000478050 FRG2BQ96QU4 278 aa4.76□□□□□ -1.65
SF3B6-202ENST00000478050 MBOAT4Q96T53 435 aa4.76□□□□□ -1.65
SF3B6-202ENST00000478050 NOTCH4Q99466 2003 aa4.76□□□□□ -1.65
SF3B6-202ENST00000478050 IER2Q9BTL4 223 aa4.76□□□□□ -1.65
SF3B6-202ENST00000478050 TBCDQ9BTW9 1192 aa4.76□□□□□ -1.65
SF3B6-202ENST00000478050 ZBP1Q9H171 429 aa4.76□□□□□ -1.65
SF3B6-202ENST00000478050 TOR3AQ9H497 397 aa4.76□□□□□ -1.65
SF3B6-202ENST00000478050 IKZF5Q9H5V7 419 aa4.76□□□□□ -1.65
SF3B6-202ENST00000478050 ZDHHC6Q9H6R6 413 aa4.76□□□□□ -1.65
SF3B6-202ENST00000478050 BRD9Q9H8M2 597 aa4.76□□□□□ -1.65
SF3B6-202ENST00000478050 SERHLQ9NQF3 203 aa4.76□□□□□ -1.65
SF3B6-202ENST00000478050 FARSBQ9NSD9 589 aaKnown RBP4.76□□□□□ -1.65
SF3B6-202ENST00000478050 FAM120CQ9NX05 1096 aaKnown RBP4.76□□□□□ -1.65
SF3B6-202ENST00000478050 B4GALT6Q9UBX8 382 aa4.76□□□□□ -1.65
SF3B6-202ENST00000478050 EBF1Q9UH73 591 aa4.76□□□□□ -1.65
SF3B6-202ENST00000478050 RPS6KA6Q9UK32 745 aa4.76□□□□□ -1.65
SF3B6-202ENST00000478050 CLEC4EQ9ULY5 219 aa4.76□□□□□ -1.65
SF3B6-202ENST00000478050 FAF1Q9UNN5 650 aaPredicted RBP4.76□□□□□ -1.65
SF3B6-202ENST00000478050 ERVW-1Q9UQF0 538 aa4.76□□□□□ -1.65
SF3B6-202ENST00000478050 RUVBL1Q9Y265 456 aaKnown RBP4.76□□□□□ -1.65
SF3B6-202ENST00000478050 DLGAP4Q9Y2H0 992 aa4.76□□□□□ -1.65
SF3B6-202ENST00000478050 SNX5Q9Y5X3 404 aa4.76□□□□□ -1.65
SF3B6-202ENST00000478050 GMEB1Q9Y692 573 aa4.76□□□□□ -1.65
SF3B6-202ENST00000478050 HSPE1-MOB4S4R3N1 261 aa4.76□□□□□ -1.65
SF3B6-202ENST00000478050 REV3LO60673 3130 aa4.76□□□□□ -1.65
SF3B6-202ENST00000478050 ASH1LQ9NR48 2969 aaKnown RBP4.76□□□□□ -1.65
SF3B6-202ENST00000478050 XIRP2A4UGR9 3374 aa4.75□□□□□ -1.65
SF3B6-202ENST00000478050 A0A0J9YVX5 310 aa4.75□□□□□ -1.65
SF3B6-202ENST00000478050 LOC100130705A0A1B0GUX0 176 aa4.75□□□□□ -1.65
SF3B6-202ENST00000478050 ZC3H12DA2A288 527 aaKnown RBP4.75□□□□□ -1.65
SF3B6-202ENST00000478050 A8MX80 341 aa4.75□□□□□ -1.65
SF3B6-202ENST00000478050 RFXANKO14593 260 aa4.75□□□□□ -1.65
SF3B6-202ENST00000478050 FPGTO14772 594 aa4.75□□□□□ -1.65
SF3B6-202ENST00000478050 PLD2O14939 933 aa4.75□□□□□ -1.65
SF3B6-202ENST00000478050 AREL1O15033 823 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms