RNA–Protein interactions for RNA: ENST00000477174.1

ACTN4-205, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-205ENST00000477174 PSD3Q9NYI0 1048 aa12.66□□□□□ -0.38
ACTN4-205ENST00000477174 TBK1Q9UHD2 729 aa12.66□□□□□ -0.38
ACTN4-205ENST00000477174 OR2W5A6NFC9 320 aa12.65□□□□□ -0.38
ACTN4-205ENST00000477174 LRRC14BA6NHZ5 514 aa12.65□□□□□ -0.38
ACTN4-205ENST00000477174 C4orf51C9J302 202 aa12.65□□□□□ -0.38
ACTN4-205ENST00000477174 B3GALT2O43825 422 aa12.65□□□□□ -0.38
ACTN4-205ENST00000477174 PRMT3O60678 531 aa12.65□□□□□ -0.38
ACTN4-205ENST00000477174 CLDN9O95484 217 aa12.65□□□□□ -0.38
ACTN4-205ENST00000477174 SHBGP04278 402 aa12.65□□□□□ -0.38
ACTN4-205ENST00000477174 SBK3P0C264 359 aa12.65□□□□□ -0.38
ACTN4-205ENST00000477174 PRR35P0CG20 571 aa12.65□□□□□ -0.38
ACTN4-205ENST00000477174 TAC1P20366 129 aa12.65□□□□□ -0.38
ACTN4-205ENST00000477174 PTX3P26022 381 aaPredicted RBP12.65□□□□□ -0.38
ACTN4-205ENST00000477174 EEF1DP29692 281 aaKnown RBP12.65□□□□□ -0.38
ACTN4-205ENST00000477174 HSD17B3P37058 310 aa12.65□□□□□ -0.38
ACTN4-205ENST00000477174 EFNA3P52797 238 aa12.65□□□□□ -0.38
ACTN4-205ENST00000477174 PLA2G16P53816 162 aa12.65□□□□□ -0.38
ACTN4-205ENST00000477174 MTTPP55157 894 aa12.65□□□□□ -0.38
ACTN4-205ENST00000477174 VSNL1P62760 191 aa12.65□□□□□ -0.38
ACTN4-205ENST00000477174 OLR1P78380 273 aa12.65□□□□□ -0.38
ACTN4-205ENST00000477174 EEF1A2Q05639 463 aaKnown RBP12.65□□□□□ -0.38
ACTN4-205ENST00000477174 ABRAXAS2Q15018 415 aa12.65□□□□□ -0.38
ACTN4-205ENST00000477174 PCOLCEQ15113 449 aa12.65□□□□□ -0.38
ACTN4-205ENST00000477174 DEPDC1Q5TB30 811 aa12.65□□□□□ -0.38
ACTN4-205ENST00000477174 ADNP2Q6IQ32 1131 aa12.65□□□□□ -0.38
ACTN4-205ENST00000477174 JMJD6Q6NYC1 403 aaPredicted RBP12.65□□□□□ -0.38
ACTN4-205ENST00000477174 EMBQ6PCB8 327 aa12.65□□□□□ -0.38
ACTN4-205ENST00000477174 ANKRD37Q7Z713 158 aa12.65□□□□□ -0.38
ACTN4-205ENST00000477174 CA13Q8N1Q1 262 aa12.65□□□□□ -0.38
ACTN4-205ENST00000477174 HUS1BQ8NHY5 278 aa12.65□□□□□ -0.38
ACTN4-205ENST00000477174 MZB1Q8WU39 189 aa12.65□□□□□ -0.38
ACTN4-205ENST00000477174 ATP6V1E2Q96A05 226 aa12.65□□□□□ -0.38
ACTN4-205ENST00000477174 QRFPRQ96P65 431 aa12.65□□□□□ -0.38
ACTN4-205ENST00000477174 KCNC2Q96PR1 638 aa12.65□□□□□ -0.38
ACTN4-205ENST00000477174 LMF1Q96S06 567 aa12.65□□□□□ -0.38
ACTN4-205ENST00000477174 SERINC2Q96SA4 455 aa12.65□□□□□ -0.38
ACTN4-205ENST00000477174 TBCDQ9BTW9 1192 aa12.65□□□□□ -0.38
ACTN4-205ENST00000477174 NTMT1Q9BV86 223 aa12.65□□□□□ -0.38
ACTN4-205ENST00000477174 C1QTNF3Q9BXJ4 246 aa12.65□□□□□ -0.38
ACTN4-205ENST00000477174 MS4A8Q9BY19 250 aa12.65□□□□□ -0.38
ACTN4-205ENST00000477174 NOL11Q9H8H0 719 aaKnown RBP12.65□□□□□ -0.38
ACTN4-205ENST00000477174 PRDM7Q9NQW5 492 aa12.65□□□□□ -0.38
ACTN4-205ENST00000477174 TMEM216Q9P0N5 145 aa12.65□□□□□ -0.38
ACTN4-205ENST00000477174 PCSK5Q92824 1860 aa12.65□□□□□ -0.38
ACTN4-205ENST00000477174 SCN3AQ9NY46 2000 aa12.64□□□□□ -0.39
ACTN4-205ENST00000477174 J3QKU1 62 aa12.64□□□□□ -0.39
ACTN4-205ENST00000477174 OR7A17O14581 309 aa12.64□□□□□ -0.39
ACTN4-205ENST00000477174 B4GALT2O60909 372 aa12.64□□□□□ -0.39
ACTN4-205ENST00000477174 CDH16O75309 829 aa12.64□□□□□ -0.39
ACTN4-205ENST00000477174 CDC123O75794 336 aaPredicted RBP12.64□□□□□ -0.39
ACTN4-205ENST00000477174 PYGBP11216 843 aa12.64□□□□□ -0.39
ACTN4-205ENST00000477174 PCNAP12004 261 aa12.64□□□□□ -0.39
ACTN4-205ENST00000477174 CCNG1P51959 295 aa12.64□□□□□ -0.39
ACTN4-205ENST00000477174 ARFIP1P53367 373 aa12.64□□□□□ -0.39
ACTN4-205ENST00000477174 PHEXP78562 749 aa12.64□□□□□ -0.39
ACTN4-205ENST00000477174 ACTN3Q08043 901 aaPredicted RBP12.64□□□□□ -0.39
ACTN4-205ENST00000477174 RUNX2Q13950 521 aa12.64□□□□□ -0.39
ACTN4-205ENST00000477174 RCN2Q14257 317 aa12.64□□□□□ -0.39
ACTN4-205ENST00000477174 C10orf62Q5T681 223 aaPredicted RBP12.64□□□□□ -0.39
ACTN4-205ENST00000477174 KHDRBS2Q5VWX1 349 aaKnown RBP12.64□□□□□ -0.39
ACTN4-205ENST00000477174 IGFL2Q6UWQ7 119 aa12.64□□□□□ -0.39
ACTN4-205ENST00000477174 ISLR2Q6UXK2 745 aa12.64□□□□□ -0.39
ACTN4-205ENST00000477174 QSOX2Q6ZRP7 698 aa12.64□□□□□ -0.39
ACTN4-205ENST00000477174 SH2D5Q6ZV89 423 aa12.64□□□□□ -0.39
ACTN4-205ENST00000477174 UBE3DQ7Z6J8 389 aa12.64□□□□□ -0.39
ACTN4-205ENST00000477174 MYLK4Q86YV6 388 aaPredicted RBP12.64□□□□□ -0.39
ACTN4-205ENST00000477174 ZADH2Q8N4Q0 377 aa12.64□□□□□ -0.39
ACTN4-205ENST00000477174 RBMXL3Q8N7X1 1067 aaKnown RBP12.64□□□□□ -0.39
ACTN4-205ENST00000477174 ARMC2Q8NEN0 867 aa12.64□□□□□ -0.39
ACTN4-205ENST00000477174 ADAMTS18Q8TE60 1221 aa12.64□□□□□ -0.39
ACTN4-205ENST00000477174 MAGEB10Q96LZ2 347 aaPredicted RBP12.64□□□□□ -0.39
ACTN4-205ENST00000477174 PTCHD1Q96NR3 888 aa12.64□□□□□ -0.39
ACTN4-205ENST00000477174 CENPKQ9BS16 269 aa12.64□□□□□ -0.39
ACTN4-205ENST00000477174 COPS7BQ9H9Q2 264 aaPredicted RBP12.64□□□□□ -0.39
ACTN4-205ENST00000477174 PRM3Q9NNZ6 103 aa12.64□□□□□ -0.39
ACTN4-205ENST00000477174 PRDM9Q9NQV7 894 aa12.64□□□□□ -0.39
ACTN4-205ENST00000477174 PCTPQ9UKL6 214 aa12.64□□□□□ -0.39
ACTN4-205ENST00000477174 RNF11Q9Y3C5 154 aa12.64□□□□□ -0.39
ACTN4-205ENST00000477174 MMACHCQ9Y4U1 282 aa12.64□□□□□ -0.39
ACTN4-205ENST00000477174 A0A1W2PPM1 405 aa12.63□□□□□ -0.39
ACTN4-205ENST00000477174 A8MT66 165 aa12.63□□□□□ -0.39
ACTN4-205ENST00000477174 FAM227AF5H4B4 570 aa12.63□□□□□ -0.39
ACTN4-205ENST00000477174 GOLGA8RI6L899 631 aa12.63□□□□□ -0.39
ACTN4-205ENST00000477174 FOXE1O00358 373 aaPredicted RBP12.63□□□□□ -0.39
ACTN4-205ENST00000477174 CLDN4O14493 209 aa12.63□□□□□ -0.39
ACTN4-205ENST00000477174 TGFB1P01137 390 aa12.63□□□□□ -0.39
ACTN4-205ENST00000477174 TUBBP07437 444 aa12.63□□□□□ -0.39
ACTN4-205ENST00000477174 NUDT17P0C025 328 aa12.63□□□□□ -0.39
ACTN4-205ENST00000477174 KRT15P19012 456 aa12.63□□□□□ -0.39
ACTN4-205ENST00000477174 ATP5F1P24539 256 aaPredicted RBP12.63□□□□□ -0.39
ACTN4-205ENST00000477174 TSFMP43897 325 aaKnown RBP12.63□□□□□ -0.39
ACTN4-205ENST00000477174 SLCO1A2P46721 670 aa12.63□□□□□ -0.39
ACTN4-205ENST00000477174 CCT5P48643 541 aa12.63□□□□□ -0.39
ACTN4-205ENST00000477174 HSD17B7P56937 341 aa12.63□□□□□ -0.39
ACTN4-205ENST00000477174 HERVK_113P63132 956 aa12.63□□□□□ -0.39
ACTN4-205ENST00000477174 TLE1Q04724 770 aa12.63□□□□□ -0.39
ACTN4-205ENST00000477174 EXT1Q16394 746 aa12.63□□□□□ -0.39
ACTN4-205ENST00000477174 CPSF6Q16630 551 aaKnown RBP eCLIP12.63□□□□□ -0.39
ACTN4-205ENST00000477174 AP5B1Q2VPB7 878 aa12.63□□□□□ -0.39
ACTN4-205ENST00000477174 NADK2Q4G0N4 442 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms