RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 SMIM10L1P0DMW3 83 aa13.74□□□□□ -0.21
COL4A6-206ENST00000477085 HSD17B1P14061 328 aa13.74□□□□□ -0.21
COL4A6-206ENST00000477085 HIST1H1TP22492 207 aaPredicted RBP13.74□□□□□ -0.21
COL4A6-206ENST00000477085 ATP5A1P25705 553 aaKnown RBP13.74□□□□□ -0.21
COL4A6-206ENST00000477085 EPHA8P29322 1005 aaPredicted RBP13.74□□□□□ -0.21
COL4A6-206ENST00000477085 AVPR2P30518 371 aa13.74□□□□□ -0.21
COL4A6-206ENST00000477085 HPCAL1P37235 193 aa13.74□□□□□ -0.21
COL4A6-206ENST00000477085 ARRB1P49407 418 aaPredicted RBP13.74□□□□□ -0.21
COL4A6-206ENST00000477085 GSK3BP49841 420 aa13.74□□□□□ -0.21
COL4A6-206ENST00000477085 GFERP55789 205 aa13.74□□□□□ -0.21
COL4A6-206ENST00000477085 OR1D5P58170 312 aa13.74□□□□□ -0.21
COL4A6-206ENST00000477085 CFHR1Q03591 330 aa13.74□□□□□ -0.21
COL4A6-206ENST00000477085 LIPEQ05469 1076 aa13.74□□□□□ -0.21
COL4A6-206ENST00000477085 DUOXA1Q1HG43 343 aa13.74□□□□□ -0.21
COL4A6-206ENST00000477085 MRM1Q6IN84 353 aaKnown RBP13.74□□□□□ -0.21
COL4A6-206ENST00000477085 ARMC6Q6NXE6 501 aa13.74□□□□□ -0.21
COL4A6-206ENST00000477085 FAM92BQ6ZTR7 304 aa13.74□□□□□ -0.21
COL4A6-206ENST00000477085 CEP68Q76N32 757 aa13.74□□□□□ -0.21
COL4A6-206ENST00000477085 PAGE2Q7Z2X7 111 aa13.74□□□□□ -0.21
COL4A6-206ENST00000477085 ZNF551Q7Z340 670 aaPredicted RBP13.74□□□□□ -0.21
COL4A6-206ENST00000477085 TICAM1Q8IUC6 712 aa13.74□□□□□ -0.21
COL4A6-206ENST00000477085 SHISA5Q8N114 240 aa13.74□□□□□ -0.21
COL4A6-206ENST00000477085 ARL10Q8N8L6 244 aa13.74□□□□□ -0.21
COL4A6-206ENST00000477085 ACOT4Q8N9L9 421 aa13.74□□□□□ -0.21
COL4A6-206ENST00000477085 OR2I1PQ8NGU4 316 aa13.74□□□□□ -0.21
COL4A6-206ENST00000477085 UTP15Q8TED0 518 aaKnown RBP13.74□□□□□ -0.21
COL4A6-206ENST00000477085 SAP25Q8TEE9 199 aa13.74□□□□□ -0.21
COL4A6-206ENST00000477085 ASB9Q96DX5 294 aa13.74□□□□□ -0.21
COL4A6-206ENST00000477085 SMIM10Q96HG1 83 aa13.74□□□□□ -0.21
COL4A6-206ENST00000477085 MAP3K3Q99759 626 aa13.74□□□□□ -0.21
COL4A6-206ENST00000477085 ZFYVE21Q9BQ24 234 aa13.74□□□□□ -0.21
COL4A6-206ENST00000477085 PIF1Q9H611 641 aa13.74□□□□□ -0.21
COL4A6-206ENST00000477085 FAM120CQ9NX05 1096 aaKnown RBP13.74□□□□□ -0.21
COL4A6-206ENST00000477085 SUSD2Q9UGT4 822 aa13.74□□□□□ -0.21
COL4A6-206ENST00000477085 MRPS2Q9Y399 296 aaKnown RBP13.74□□□□□ -0.21
COL4A6-206ENST00000477085 ASB4Q9Y574 426 aa13.74□□□□□ -0.21
COL4A6-206ENST00000477085 NCOR1O75376 2440 aa13.74□□□□□ -0.21
COL4A6-206ENST00000477085 SPEGQ15772 3267 aa13.74□□□□□ -0.21
COL4A6-206ENST00000477085 PRSS51A0A1B0GVH4 220 aa13.73□□□□□ -0.21
COL4A6-206ENST00000477085 SLC9B1P1A6NJY1 282 aa13.73□□□□□ -0.21
COL4A6-206ENST00000477085 RFXANKO14593 260 aa13.73□□□□□ -0.21
COL4A6-206ENST00000477085 B4GAT1O43505 415 aa13.73□□□□□ -0.21
COL4A6-206ENST00000477085 PRKRAO75569 313 aaKnown RBP13.73□□□□□ -0.21
COL4A6-206ENST00000477085 ZNF888P0CJ79 500 aaPredicted RBP13.73□□□□□ -0.21
COL4A6-206ENST00000477085 ALDH4A1P30038 563 aa13.73□□□□□ -0.21
COL4A6-206ENST00000477085 SSR2P43308 183 aa13.73□□□□□ -0.21
COL4A6-206ENST00000477085 KLC1Q07866 573 aa13.73□□□□□ -0.21
COL4A6-206ENST00000477085 SLAMF1Q13291 335 aa13.73□□□□□ -0.21
COL4A6-206ENST00000477085 SLC14A1Q13336 389 aa13.73□□□□□ -0.21
COL4A6-206ENST00000477085 IRGCQ6NXR0 463 aa13.73□□□□□ -0.21
COL4A6-206ENST00000477085 PRR23BQ6ZRT6 265 aa13.73□□□□□ -0.21
COL4A6-206ENST00000477085 IKBIPQ70UQ0 350 aa13.73□□□□□ -0.21
COL4A6-206ENST00000477085 OR8J3Q8NGG0 315 aa13.73□□□□□ -0.21
COL4A6-206ENST00000477085 CCDC115Q96NT0 180 aa13.73□□□□□ -0.21
COL4A6-206ENST00000477085 QRFPRQ96P65 431 aa13.73□□□□□ -0.21
COL4A6-206ENST00000477085 KCNC2Q96PR1 638 aa13.73□□□□□ -0.21
COL4A6-206ENST00000477085 CPPED1Q9BRF8 314 aaPredicted RBP13.73□□□□□ -0.21
COL4A6-206ENST00000477085 CENPKQ9BS16 269 aa13.73□□□□□ -0.21
COL4A6-206ENST00000477085 TRIM4Q9C037 500 aa13.73□□□□□ -0.21
COL4A6-206ENST00000477085 BHLHE41Q9C0J9 482 aaPredicted RBP13.73□□□□□ -0.21
COL4A6-206ENST00000477085 RMND5AQ9H871 391 aa13.73□□□□□ -0.21
COL4A6-206ENST00000477085 RNPEPL1Q9HAU8 725 aa13.73□□□□□ -0.21
COL4A6-206ENST00000477085 CAPN10Q9HC96 672 aa13.73□□□□□ -0.21
COL4A6-206ENST00000477085 ZSCAN32Q9NX65 697 aa13.73□□□□□ -0.21
COL4A6-206ENST00000477085 C5AR2Q9P296 337 aa13.73□□□□□ -0.21
COL4A6-206ENST00000477085 L3MBTL1Q9Y468 752 aa13.73□□□□□ -0.21
COL4A6-206ENST00000477085 MDC1Q14676 2089 aaKnown RBP13.73□□□□□ -0.21
COL4A6-206ENST00000477085 RHPN2P1A8MT19 583 aa13.73□□□□□ -0.21
COL4A6-206ENST00000477085 NUDT21O43809 227 aaKnown RBP13.73□□□□□ -0.21
COL4A6-206ENST00000477085 CFIP05156 583 aa13.73□□□□□ -0.21
COL4A6-206ENST00000477085 FAM58BPP0C7Q3 252 aa13.73□□□□□ -0.21
COL4A6-206ENST00000477085 DDCP20711 480 aa13.73□□□□□ -0.21
COL4A6-206ENST00000477085 CERS1P27544 350 aa13.73□□□□□ -0.21
COL4A6-206ENST00000477085 SOX11P35716 441 aa13.73□□□□□ -0.21
COL4A6-206ENST00000477085 GZMMP51124 257 aa13.73□□□□□ -0.21
COL4A6-206ENST00000477085 HNRNPFP52597 415 aaKnown RBP13.73□□□□□ -0.21
COL4A6-206ENST00000477085 BTN3A2P78410 334 aa13.73□□□□□ -0.21
COL4A6-206ENST00000477085 BIRC2Q13490 618 aa13.73□□□□□ -0.21
COL4A6-206ENST00000477085 FLOT2Q14254 428 aa13.73□□□□□ -0.21
COL4A6-206ENST00000477085 SNCBQ16143 134 aa13.73□□□□□ -0.21
COL4A6-206ENST00000477085 LPAL2Q16609 132 aa13.73□□□□□ -0.21
COL4A6-206ENST00000477085 ZNF528Q3MIS6 628 aa13.73□□□□□ -0.21
COL4A6-206ENST00000477085 C6orf163Q5TEZ5 329 aa13.73□□□□□ -0.21
COL4A6-206ENST00000477085 RNF111Q6ZNA4 994 aa13.73□□□□□ -0.21
COL4A6-206ENST00000477085 BMP8AQ7Z5Y6 402 aa13.73□□□□□ -0.21
COL4A6-206ENST00000477085 IFNEQ86WN2 208 aa13.73□□□□□ -0.21
COL4A6-206ENST00000477085 CLEC4FQ8N1N0 589 aa13.73□□□□□ -0.21
COL4A6-206ENST00000477085 ENDOVQ8N8Q3 282 aaKnown RBP13.73□□□□□ -0.21
COL4A6-206ENST00000477085 BHLHE22Q8NFJ8 381 aaPredicted RBP13.73□□□□□ -0.21
COL4A6-206ENST00000477085 PYDC1Q8WXC3 89 aa13.73□□□□□ -0.21
COL4A6-206ENST00000477085 STARD8Q92502 1023 aa13.73□□□□□ -0.21
COL4A6-206ENST00000477085 PPCDCQ96CD2 204 aa13.73□□□□□ -0.21
COL4A6-206ENST00000477085 THAP11Q96EK4 314 aa13.73□□□□□ -0.21
COL4A6-206ENST00000477085 ZNF583Q96ND8 569 aa13.73□□□□□ -0.21
COL4A6-206ENST00000477085 PANX1Q96RD7 426 aa13.73□□□□□ -0.21
COL4A6-206ENST00000477085 TBCDQ9BTW9 1192 aa13.73□□□□□ -0.21
COL4A6-206ENST00000477085 ALG2Q9H553 416 aa13.73□□□□□ -0.21
COL4A6-206ENST00000477085 SLAMF7Q9NQ25 335 aa13.73□□□□□ -0.21
COL4A6-206ENST00000477085 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.73□□□□□ -0.21
COL4A6-206ENST00000477085 EGFL7Q9UHF1 273 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms