RNA–Protein interactions for RNA: ENST00000477069.5

NUP188-205, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 2,941 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-205ENST00000477069 ACSL6Q9UKU0 697 aa10.98□□□□□ -0.65
NUP188-205ENST00000477069 NAALAD2Q9Y3Q0 740 aa10.98□□□□□ -0.65
NUP188-205ENST00000477069 SUV39H1O43463 412 aa10.98□□□□□ -0.65
NUP188-205ENST00000477069 ACP5P13686 325 aa10.98□□□□□ -0.65
NUP188-205ENST00000477069 CXCR2P25025 360 aa10.98□□□□□ -0.65
NUP188-205ENST00000477069 TIE1P35590 1138 aa10.98□□□□□ -0.65
NUP188-205ENST00000477069 IGFALSP35858 605 aa10.98□□□□□ -0.65
NUP188-205ENST00000477069 CLK3P49761 638 aaKnown RBP10.98□□□□□ -0.65
NUP188-205ENST00000477069 SEC13P55735 322 aa10.98□□□□□ -0.65
NUP188-205ENST00000477069 RPS21P63220 83 aaKnown RBP10.98□□□□□ -0.65
NUP188-205ENST00000477069 SELENOWP63302 87 aa10.98□□□□□ -0.65
NUP188-205ENST00000477069 RBBP4Q09028 425 aa10.98□□□□□ -0.65
NUP188-205ENST00000477069 GCNT6Q5T4J0 391 aa10.98□□□□□ -0.65
NUP188-205ENST00000477069 SGCDQ92629 289 aa10.98□□□□□ -0.65
NUP188-205ENST00000477069 ZNF566Q969W8 418 aa10.98□□□□□ -0.65
NUP188-205ENST00000477069 TM4SF18Q96CE8 201 aa10.98□□□□□ -0.65
NUP188-205ENST00000477069 EPYCQ99645 322 aa10.98□□□□□ -0.65
NUP188-205ENST00000477069 TRMT61BQ9BVS5 477 aaKnown RBP10.98□□□□□ -0.65
NUP188-205ENST00000477069 PHPT1Q9NRX4 125 aaPredicted RBP10.98□□□□□ -0.65
NUP188-205ENST00000477069 CDC14AQ9UNH5 594 aa10.98□□□□□ -0.65
NUP188-205ENST00000477069 WBP11Q9Y2W2 641 aaKnown RBP10.98□□□□□ -0.65
NUP188-205ENST00000477069 A0A1W2PRB8 838 aa10.98□□□□□ -0.65
NUP188-205ENST00000477069 ABCB7O75027 752 aa10.98□□□□□ -0.65
NUP188-205ENST00000477069 JRKO75564 520 aa10.98□□□□□ -0.65
NUP188-205ENST00000477069 DDCP20711 480 aa10.98□□□□□ -0.65
NUP188-205ENST00000477069 TTKP33981 857 aa10.98□□□□□ -0.65
NUP188-205ENST00000477069 FRKP42685 505 aaPredicted RBP10.98□□□□□ -0.65
NUP188-205ENST00000477069 CRATP43155 626 aa10.98□□□□□ -0.65
NUP188-205ENST00000477069 KEAP1Q14145 624 aa10.98□□□□□ -0.65
NUP188-205ENST00000477069 SKIV2LQ15477 1246 aaKnown RBP10.98□□□□□ -0.65
NUP188-205ENST00000477069 SLC5A12Q1EHB4 618 aa10.98□□□□□ -0.65
NUP188-205ENST00000477069 TMEM196Q5HYL7 178 aa10.98□□□□□ -0.65
NUP188-205ENST00000477069 UBE3DQ7Z6J8 389 aa10.98□□□□□ -0.65
NUP188-205ENST00000477069 CLVS1Q8IUQ0 354 aaPredicted RBP10.98□□□□□ -0.65
NUP188-205ENST00000477069 OR13F1Q8NGS4 319 aa10.98□□□□□ -0.65
NUP188-205ENST00000477069 ZNF420Q8TAQ5 688 aaPredicted RBP10.98□□□□□ -0.65
NUP188-205ENST00000477069 KLK6Q92876 244 aa10.98□□□□□ -0.65
NUP188-205ENST00000477069 TAMM41Q96BW9 452 aa10.98□□□□□ -0.65
NUP188-205ENST00000477069 ZNF764Q96H86 408 aaPredicted RBP10.98□□□□□ -0.65
NUP188-205ENST00000477069 F2RL3Q96RI0 385 aa10.98□□□□□ -0.65
NUP188-205ENST00000477069 TMEM121BQ9BXQ6 578 aaPredicted RBP10.98□□□□□ -0.65
NUP188-205ENST00000477069 RMI1Q9H9A7 625 aa10.98□□□□□ -0.65
NUP188-205ENST00000477069 LIN28AQ9H9Z2 209 aaKnown RBP10.98□□□□□ -0.65
NUP188-205ENST00000477069 CXorf21Q9HAI6 301 aa10.98□□□□□ -0.65
NUP188-205ENST00000477069 SLAMF7Q9NQ25 335 aa10.98□□□□□ -0.65
NUP188-205ENST00000477069 ADPRHL2Q9NX46 363 aa10.98□□□□□ -0.65
NUP188-205ENST00000477069 AHSPQ9NZD4 102 aa10.98□□□□□ -0.65
NUP188-205ENST00000477069 HEATR5BQ9P2D3 2071 aa10.97□□□□□ -0.65
NUP188-205ENST00000477069 FEZF1A0PJY2 475 aa10.97□□□□□ -0.65
NUP188-205ENST00000477069 ANKDD1BA6NHY2 528 aa10.97□□□□□ -0.65
NUP188-205ENST00000477069 H7BY64 318 aa10.97□□□□□ -0.65
NUP188-205ENST00000477069 BCKDKO14874 412 aa10.97□□□□□ -0.65
NUP188-205ENST00000477069 FKBP9O95302 570 aa10.97□□□□□ -0.65
NUP188-205ENST00000477069 AGXTP21549 392 aa10.97□□□□□ -0.65
NUP188-205ENST00000477069 AQP1P29972 269 aa10.97□□□□□ -0.65
NUP188-205ENST00000477069 CASP9P55211 416 aa10.97□□□□□ -0.65
NUP188-205ENST00000477069 PCBP3P57721 371 aaKnown RBP10.97□□□□□ -0.65
NUP188-205ENST00000477069 CSNK1G2P78368 415 aa10.97□□□□□ -0.65
NUP188-205ENST00000477069 RAPSNQ13702 412 aa10.97□□□□□ -0.65
NUP188-205ENST00000477069 BROXQ5VW32 411 aa10.97□□□□□ -0.65
NUP188-205ENST00000477069 FAM124AQ86V42 546 aa10.97□□□□□ -0.65
NUP188-205ENST00000477069 HORMAD1Q86X24 394 aa10.97□□□□□ -0.65
NUP188-205ENST00000477069 SCARF2Q96GP6 870 aaPredicted RBP10.97□□□□□ -0.65
NUP188-205ENST00000477069 TPD52L3Q96J77 140 aa10.97□□□□□ -0.65
NUP188-205ENST00000477069 C12orf66Q96MD2 445 aa10.97□□□□□ -0.65
NUP188-205ENST00000477069 PRAP1Q96NZ9 151 aa10.97□□□□□ -0.65
NUP188-205ENST00000477069 AICDAQ9GZX7 198 aa10.97□□□□□ -0.65
NUP188-205ENST00000477069 PRM3Q9NNZ6 103 aa10.97□□□□□ -0.65
NUP188-205ENST00000477069 PAK1IP1Q9NWT1 392 aaPredicted RBP10.97□□□□□ -0.65
NUP188-205ENST00000477069 THUMPD1Q9NXG2 353 aaKnown RBP10.97□□□□□ -0.65
NUP188-205ENST00000477069 SPASTQ9UBP0 616 aa10.97□□□□□ -0.65
NUP188-205ENST00000477069 SAMHD1Q9Y3Z3 626 aaKnown RBP10.97□□□□□ -0.65
NUP188-205ENST00000477069 PLEKHM1Q9Y4G2 1056 aa10.97□□□□□ -0.65
NUP188-205ENST00000477069 SPTBN5Q9NRC6 3674 aaKnown RBP10.97□□□□□ -0.65
NUP188-205ENST00000477069 A0A1W2PQU0 124 aa10.97□□□□□ -0.65
NUP188-205ENST00000477069 PRAMEF25A6NGN4 478 aa10.97□□□□□ -0.65
NUP188-205ENST00000477069 SLC1A7O00341 560 aa10.97□□□□□ -0.65
NUP188-205ENST00000477069 RTCAO00442 366 aaKnown RBP10.97□□□□□ -0.65
NUP188-205ENST00000477069 LATO43561 262 aa10.97□□□□□ -0.65
NUP188-205ENST00000477069 ADAM23O75077 832 aa10.97□□□□□ -0.65
NUP188-205ENST00000477069 SEC14L2O76054 403 aa10.97□□□□□ -0.65
NUP188-205ENST00000477069 C9P02748 559 aa10.97□□□□□ -0.65
NUP188-205ENST00000477069 GSTM2P28161 218 aa10.97□□□□□ -0.65
NUP188-205ENST00000477069 PKLRP30613 574 aa10.97□□□□□ -0.65
NUP188-205ENST00000477069 ADPRHP54922 357 aa10.97□□□□□ -0.65
NUP188-205ENST00000477069 CYP4F2P78329 520 aa10.97□□□□□ -0.65
NUP188-205ENST00000477069 GRSF1Q12849 480 aaKnown RBP eCLIP10.97□□□□□ -0.65
NUP188-205ENST00000477069 SCARB2Q14108 478 aa10.97□□□□□ -0.65
NUP188-205ENST00000477069 CLCA4Q14CN2 919 aa10.97□□□□□ -0.65
NUP188-205ENST00000477069 CRB2Q5IJ48 1285 aa10.97□□□□□ -0.65
NUP188-205ENST00000477069 ATAT1Q5SQI0 421 aa10.97□□□□□ -0.65
NUP188-205ENST00000477069 GALNT5Q7Z7M9 940 aa10.97□□□□□ -0.65
NUP188-205ENST00000477069 RNF130Q86XS8 419 aa10.97□□□□□ -0.65
NUP188-205ENST00000477069 SPARTQ8N0X7 666 aa10.97□□□□□ -0.65
NUP188-205ENST00000477069 OR2A1Q8NGT9 310 aa10.97□□□□□ -0.65
NUP188-205ENST00000477069 CREB3L4Q8TEY5 395 aa10.97□□□□□ -0.65
NUP188-205ENST00000477069 C12orf43Q96C57 262 aaKnown RBP10.97□□□□□ -0.65
NUP188-205ENST00000477069 FERD3LQ96RJ6 166 aa10.97□□□□□ -0.65
NUP188-205ENST00000477069 SLC17A9Q9BYT1 436 aa10.97□□□□□ -0.65
NUP188-205ENST00000477069 SLC6A17Q9H1V8 727 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms