RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 FAM71E1Q6IPT2 247 aa15.76■□□□□ 0.11
TMEM53-208ENST00000476724 TRIM40Q6P9F5 258 aa15.76■□□□□ 0.11
TMEM53-208ENST00000476724 IKBIPQ70UQ0 350 aa15.76■□□□□ 0.11
TMEM53-208ENST00000476724 MMAAQ8IVH4 418 aaKnown RBP15.76■□□□□ 0.11
TMEM53-208ENST00000476724 C16orf78Q8WTQ4 265 aa15.76■□□□□ 0.11
TMEM53-208ENST00000476724 FAR1Q8WVX9 515 aa15.76■□□□□ 0.11
TMEM53-208ENST00000476724 IPCEF1Q8WWN9 437 aaPredicted RBP15.76■□□□□ 0.11
TMEM53-208ENST00000476724 SUSD6Q92537 303 aa15.76■□□□□ 0.11
TMEM53-208ENST00000476724 TANKQ92844 425 aa15.76■□□□□ 0.11
TMEM53-208ENST00000476724 RAD51AP1Q96B01 352 aa15.76■□□□□ 0.11
TMEM53-208ENST00000476724 TMEM38AQ9H6F2 299 aa15.76■□□□□ 0.11
TMEM53-208ENST00000476724 PRSS16Q9NQE7 514 aa15.76■□□□□ 0.11
TMEM53-208ENST00000476724 EXD2Q9NVH0 621 aa15.76■□□□□ 0.11
TMEM53-208ENST00000476724 E9PQ18 207 aa15.75■□□□□ 0.11
TMEM53-208ENST00000476724 PFDN1O60925 122 aa15.75■□□□□ 0.11
TMEM53-208ENST00000476724 TNFRSF21O75509 655 aa15.75■□□□□ 0.11
TMEM53-208ENST00000476724 TGFB1P01137 390 aa15.75■□□□□ 0.11
TMEM53-208ENST00000476724 HTR1BP28222 390 aa15.75■□□□□ 0.11
TMEM53-208ENST00000476724 EIF2DP41214 584 aaKnown RBP15.75■□□□□ 0.11
TMEM53-208ENST00000476724 MVDP53602 400 aa15.75■□□□□ 0.11
TMEM53-208ENST00000476724 CRYBA2P53672 197 aa15.75■□□□□ 0.11
TMEM53-208ENST00000476724 GP2P55259 537 aaKnown RBP15.75■□□□□ 0.11
TMEM53-208ENST00000476724 HBA1P69905 142 aa15.75■□□□□ 0.11
TMEM53-208ENST00000476724 RPA4Q13156 261 aa15.75■□□□□ 0.11
TMEM53-208ENST00000476724 TSTA3Q13630 321 aaPredicted RBP15.75■□□□□ 0.11
TMEM53-208ENST00000476724 GCNT6Q5T4J0 391 aa15.75■□□□□ 0.11
TMEM53-208ENST00000476724 LCTLQ6UWM7 567 aa15.75■□□□□ 0.11
TMEM53-208ENST00000476724 XKR5Q6UX68 686 aa15.75■□□□□ 0.11
TMEM53-208ENST00000476724 LINC00299Q6ZSB3 139 aa15.75■□□□□ 0.11
TMEM53-208ENST00000476724 CCDC80Q76M96 950 aa15.75■□□□□ 0.11
TMEM53-208ENST00000476724 TRIM74Q86UV6 250 aa15.75■□□□□ 0.11
TMEM53-208ENST00000476724 KRT78Q8N1N4 520 aa15.75■□□□□ 0.11
TMEM53-208ENST00000476724 OXR1Q8N573 874 aa15.75■□□□□ 0.11
TMEM53-208ENST00000476724 SLC35A5Q9BS91 424 aa15.75■□□□□ 0.11
TMEM53-208ENST00000476724 PRO3102Q9H379 93 aa15.75■□□□□ 0.11
TMEM53-208ENST00000476724 DYRK4Q9NR20 520 aa15.75■□□□□ 0.11
TMEM53-208ENST00000476724 LMCD1Q9NZU5 365 aa15.75■□□□□ 0.11
TMEM53-208ENST00000476724 K7ESM1 405 aa15.75■□□□□ 0.11
TMEM53-208ENST00000476724 BCAS1O75363 584 aaPredicted RBP15.75■□□□□ 0.11
TMEM53-208ENST00000476724 INMTO95050 263 aa15.75■□□□□ 0.11
TMEM53-208ENST00000476724 IFNA14P01570 189 aa15.75■□□□□ 0.11
TMEM53-208ENST00000476724 CYP4B1P13584 511 aa15.75■□□□□ 0.11
TMEM53-208ENST00000476724 ITGA2P17301 1181 aa15.75■□□□□ 0.11
TMEM53-208ENST00000476724 ACVR2AP27037 513 aa15.75■□□□□ 0.11
TMEM53-208ENST00000476724 FMO3P31513 532 aa15.75■□□□□ 0.11
TMEM53-208ENST00000476724 MAPK10P53779 464 aa15.75■□□□□ 0.11
TMEM53-208ENST00000476724 C21orf59P57076 290 aa15.75■□□□□ 0.11
TMEM53-208ENST00000476724 SLC16A12Q6ZSM3 486 aa15.75■□□□□ 0.11
TMEM53-208ENST00000476724 CACUL1Q86Y37 369 aa15.75■□□□□ 0.11
TMEM53-208ENST00000476724 ZNF547Q8IVP9 402 aa15.75■□□□□ 0.11
TMEM53-208ENST00000476724 SMRP1Q8NCR6 262 aa15.75■□□□□ 0.11
TMEM53-208ENST00000476724 TRUB1Q8WWH5 349 aaKnown RBP15.75■□□□□ 0.11
TMEM53-208ENST00000476724 MAL2Q969L2 176 aa15.75■□□□□ 0.11
TMEM53-208ENST00000476724 HRASLS5Q96KN8 279 aa15.75■□□□□ 0.11
TMEM53-208ENST00000476724 GABARAPL3Q9BY60 117 aa15.75■□□□□ 0.11
TMEM53-208ENST00000476724 TAS2R9Q9NYW1 312 aa15.75■□□□□ 0.11
TMEM53-208ENST00000476724 AHSPQ9NZD4 102 aa15.75■□□□□ 0.11
TMEM53-208ENST00000476724 ERVK-18Q9QC07 812 aa15.75■□□□□ 0.11
TMEM53-208ENST00000476724 WBP11Q9Y2W2 641 aaKnown RBP15.75■□□□□ 0.11
TMEM53-208ENST00000476724 FOXD2O60548 495 aaPredicted RBP15.74■□□□□ 0.11
TMEM53-208ENST00000476724 MMP20O60882 483 aa15.74■□□□□ 0.11
TMEM53-208ENST00000476724 GCM2O75603 506 aaPredicted RBP15.74■□□□□ 0.11
TMEM53-208ENST00000476724 KRT75O95678 551 aa15.74■□□□□ 0.11
TMEM53-208ENST00000476724 C6orf47O95873 294 aa15.74■□□□□ 0.11
TMEM53-208ENST00000476724 APODP05090 189 aa15.74■□□□□ 0.11
TMEM53-208ENST00000476724 KELP23276 732 aa15.74■□□□□ 0.11
TMEM53-208ENST00000476724 RRM2P31350 389 aa15.74■□□□□ 0.11
TMEM53-208ENST00000476724 PRIM2P49643 509 aa15.74■□□□□ 0.11
TMEM53-208ENST00000476724 BMXP51813 675 aa15.74■□□□□ 0.11
TMEM53-208ENST00000476724 RPP38P78345 283 aaKnown RBP15.74■□□□□ 0.11
TMEM53-208ENST00000476724 CAMK2GQ13555 558 aaPredicted RBP15.74■□□□□ 0.11
TMEM53-208ENST00000476724 ZNF630Q2M218 657 aaPredicted RBP15.74■□□□□ 0.11
TMEM53-208ENST00000476724 IFI44LQ53G44 452 aa15.74■□□□□ 0.11
TMEM53-208ENST00000476724 ANGPTL8Q6UXH0 198 aa15.74■□□□□ 0.11
TMEM53-208ENST00000476724 SLC30A8Q8IWU4 369 aa15.74■□□□□ 0.11
TMEM53-208ENST00000476724 ZNF540Q8NDQ6 660 aa15.74■□□□□ 0.11
TMEM53-208ENST00000476724 OR4K1Q8NGD4 311 aa15.74■□□□□ 0.11
TMEM53-208ENST00000476724 GIPC3Q8TF64 312 aa15.74■□□□□ 0.11
TMEM53-208ENST00000476724 HSPBAP1Q96EW2 488 aa15.74■□□□□ 0.11
TMEM53-208ENST00000476724 ZDHHC5Q9C0B5 715 aa15.74■□□□□ 0.11
TMEM53-208ENST00000476724 OR51B5Q9H339 312 aa15.74■□□□□ 0.11
TMEM53-208ENST00000476724 C1GALT1Q9NS00 363 aa15.74■□□□□ 0.11
TMEM53-208ENST00000476724 TBCCD1Q9NVR7 557 aa15.74■□□□□ 0.11
TMEM53-208ENST00000476724 GPATCH2Q9NW75 528 aa15.74■□□□□ 0.11
TMEM53-208ENST00000476724 SPASTQ9UBP0 616 aa15.74■□□□□ 0.11
TMEM53-208ENST00000476724 RAPGEFL1Q9UHV5 662 aa15.74■□□□□ 0.11
TMEM53-208ENST00000476724 SH2B3Q9UQQ2 575 aa15.74■□□□□ 0.11
TMEM53-208ENST00000476724 PCDHGA10Q9Y5H3 936 aa15.74■□□□□ 0.11
TMEM53-208ENST00000476724 STON1Q9Y6Q2 735 aa15.74■□□□□ 0.11
TMEM53-208ENST00000476724 CKAP5Q14008 2032 aa15.74■□□□□ 0.11
TMEM53-208ENST00000476724 A8MVJ9 347 aa15.74■□□□□ 0.11
TMEM53-208ENST00000476724 TMEM229AB2RXF0 380 aa15.74■□□□□ 0.11
TMEM53-208ENST00000476724 RGS10O43665 173 aa15.74■□□□□ 0.11
TMEM53-208ENST00000476724 GABARAPO95166 117 aa15.74■□□□□ 0.11
TMEM53-208ENST00000476724 ANXA8P13928 327 aa15.74■□□□□ 0.11
TMEM53-208ENST00000476724 ZNF12P17014 697 aa15.74■□□□□ 0.11
TMEM53-208ENST00000476724 PXNP49023 591 aaPredicted RBP15.74■□□□□ 0.11
TMEM53-208ENST00000476724 SEC13P55735 322 aa15.74■□□□□ 0.11
TMEM53-208ENST00000476724 TMED1Q13445 227 aa15.74■□□□□ 0.11
TMEM53-208ENST00000476724 HTR4Q13639 388 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms