RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 RHBDF1Q96CC6 855 aa4□□□□□ -1.77
CD55-208ENST00000476590 OTUB2Q96DC9 234 aa4□□□□□ -1.77
CD55-208ENST00000476590 PABPC5Q96DU9 382 aaKnown RBP4□□□□□ -1.77
CD55-208ENST00000476590 MISP3Q96FF7 219 aa4□□□□□ -1.77
CD55-208ENST00000476590 CENPNQ96H22 339 aaPredicted RBP4□□□□□ -1.77
CD55-208ENST00000476590 SLC45A3Q96JT2 553 aa4□□□□□ -1.77
CD55-208ENST00000476590 LENG8Q96PV6 779 aaPredicted RBP4□□□□□ -1.77
CD55-208ENST00000476590 SLC30A2Q9BRI3 323 aa4□□□□□ -1.77
CD55-208ENST00000476590 KATNB1Q9BVA0 655 aa4□□□□□ -1.77
CD55-208ENST00000476590 SF3B5Q9BWJ5 86 aaKnown RBP4□□□□□ -1.77
CD55-208ENST00000476590 MRPL4Q9BYD3 311 aaKnown RBP4□□□□□ -1.77
CD55-208ENST00000476590 B3GNT5Q9BYG0 378 aa4□□□□□ -1.77
CD55-208ENST00000476590 SDCBP2Q9H190 292 aa4□□□□□ -1.77
CD55-208ENST00000476590 KCNK12Q9HB15 430 aa4□□□□□ -1.77
CD55-208ENST00000476590 TMEM8AQ9HCN3 771 aa4□□□□□ -1.77
CD55-208ENST00000476590 SPAG4Q9NPE6 437 aa4□□□□□ -1.77
CD55-208ENST00000476590 C11orf16Q9NQ32 467 aa4□□□□□ -1.77
CD55-208ENST00000476590 PRDM7Q9NQW5 492 aa4□□□□□ -1.77
CD55-208ENST00000476590 AGPAT4Q9NRZ5 378 aa4□□□□□ -1.77
CD55-208ENST00000476590 GFOD1Q9NXC2 390 aa4□□□□□ -1.77
CD55-208ENST00000476590 TAS2R10Q9NYW0 307 aa4□□□□□ -1.77
CD55-208ENST00000476590 KCMF1Q9P0J7 381 aa4□□□□□ -1.77
CD55-208ENST00000476590 METTL1Q9UBP6 276 aaKnown RBP4□□□□□ -1.77
CD55-208ENST00000476590 STUB1Q9UNE7 303 aa4□□□□□ -1.77
CD55-208ENST00000476590 BCS1LQ9Y276 419 aa4□□□□□ -1.77
CD55-208ENST00000476590 NCKAP1Q9Y2A7 1128 aa4□□□□□ -1.77
CD55-208ENST00000476590 ATRNO75882 1429 aa4□□□□□ -1.77
CD55-208ENST00000476590 RIC1Q4ADV7 1423 aa4□□□□□ -1.77
CD55-208ENST00000476590 CNTNAP4Q9C0A0 1308 aa3.99□□□□□ -1.77
CD55-208ENST00000476590 A2ML1A8K2U0 1454 aa3.99□□□□□ -1.77
CD55-208ENST00000476590 ALKQ9UM73 1620 aa3.99□□□□□ -1.77
CD55-208ENST00000476590 A0A1W2PP18 115 aa3.99□□□□□ -1.77
CD55-208ENST00000476590 A0A1W2PRB8 838 aa3.99□□□□□ -1.77
CD55-208ENST00000476590 OR2AT4A6NND4 320 aa3.99□□□□□ -1.77
CD55-208ENST00000476590 SMLR1H3BR10 107 aa3.99□□□□□ -1.77
CD55-208ENST00000476590 K7ESF4 209 aa3.99□□□□□ -1.77
CD55-208ENST00000476590 DFFAO00273 331 aa3.99□□□□□ -1.77
CD55-208ENST00000476590 EI24O14681 340 aa3.99□□□□□ -1.77
CD55-208ENST00000476590 PROM1O43490 865 aa3.99□□□□□ -1.77
CD55-208ENST00000476590 CHP2O43745 196 aa3.99□□□□□ -1.77
CD55-208ENST00000476590 MRPS14O60783 128 aaKnown RBP3.99□□□□□ -1.77
CD55-208ENST00000476590 ERN1O75460 977 aaKnown RBP3.99□□□□□ -1.77
CD55-208ENST00000476590 LRIG2O94898 1065 aa3.99□□□□□ -1.77
CD55-208ENST00000476590 ATXN1LP0C7T5 689 aaKnown RBP3.99□□□□□ -1.77
CD55-208ENST00000476590 ODC1P11926 461 aa3.99□□□□□ -1.77
CD55-208ENST00000476590 C6P13671 934 aa3.99□□□□□ -1.77
CD55-208ENST00000476590 C4BPBP20851 252 aa3.99□□□□□ -1.77
CD55-208ENST00000476590 GALP22466 123 aa3.99□□□□□ -1.77
CD55-208ENST00000476590 MAPK3P27361 379 aaPredicted RBP3.99□□□□□ -1.77
CD55-208ENST00000476590 HOXA11P31270 313 aaPredicted RBP3.99□□□□□ -1.77
CD55-208ENST00000476590 FMO3P31513 532 aa3.99□□□□□ -1.77
CD55-208ENST00000476590 THBS2P35442 1172 aa3.99□□□□□ -1.77
CD55-208ENST00000476590 MAP3K8P41279 467 aa3.99□□□□□ -1.77
CD55-208ENST00000476590 ASPAP45381 313 aa3.99□□□□□ -1.77
CD55-208ENST00000476590 MARCKSL1P49006 195 aa3.99□□□□□ -1.77
CD55-208ENST00000476590 DHPSP49366 369 aaPredicted RBP3.99□□□□□ -1.77
CD55-208ENST00000476590 NUMBP49757 651 aa3.99□□□□□ -1.77
CD55-208ENST00000476590 SUOXP51687 545 aa3.99□□□□□ -1.77
CD55-208ENST00000476590 NAPAP54920 295 aa3.99□□□□□ -1.77
CD55-208ENST00000476590 SOX8P57073 446 aa3.99□□□□□ -1.77
CD55-208ENST00000476590 IL2P60568 153 aa3.99□□□□□ -1.77
CD55-208ENST00000476590 NRG1Q02297 640 aaPredicted RBP3.99□□□□□ -1.77
CD55-208ENST00000476590 SEMG2Q02383 582 aa3.99□□□□□ -1.77
CD55-208ENST00000476590 MVKQ03426 396 aa3.99□□□□□ -1.77
CD55-208ENST00000476590 TNFRSF9Q07011 255 aa3.99□□□□□ -1.77
CD55-208ENST00000476590 ZNF155Q12901 538 aaPredicted RBP3.99□□□□□ -1.77
CD55-208ENST00000476590 BIKQ13323 160 aa3.99□□□□□ -1.77
CD55-208ENST00000476590 NAE1Q13564 534 aa3.99□□□□□ -1.77
CD55-208ENST00000476590 ALCAMQ13740 583 aa3.99□□□□□ -1.77
CD55-208ENST00000476590 SERTAD2Q14140 314 aa3.99□□□□□ -1.77
CD55-208ENST00000476590 PRPSAP1Q14558 356 aa3.99□□□□□ -1.77
CD55-208ENST00000476590 USP10Q14694 798 aaKnown RBP3.99□□□□□ -1.77
CD55-208ENST00000476590 TRAM1Q15629 374 aa3.99□□□□□ -1.77
CD55-208ENST00000476590 KCNMB1Q16558 191 aa3.99□□□□□ -1.77
CD55-208ENST00000476590 HSDL1Q3SXM5 330 aa3.99□□□□□ -1.77
CD55-208ENST00000476590 UGT3A2Q3SY77 523 aa3.99□□□□□ -1.77
CD55-208ENST00000476590 PRAMEF19Q5SWL8 479 aa3.99□□□□□ -1.77
CD55-208ENST00000476590 C6orf141Q5SZD1 244 aa3.99□□□□□ -1.77
CD55-208ENST00000476590 FAXCQ5TGI0 409 aa3.99□□□□□ -1.77
CD55-208ENST00000476590 CES4AQ5XG92 561 aa3.99□□□□□ -1.77
CD55-208ENST00000476590 ZNF772Q68DY9 489 aaPredicted RBP3.99□□□□□ -1.77
CD55-208ENST00000476590 ABHD17CQ6PCB6 329 aa3.99□□□□□ -1.77
CD55-208ENST00000476590 PLET1Q6UQ28 207 aa3.99□□□□□ -1.77
CD55-208ENST00000476590 IL27RAQ6UWB1 636 aa3.99□□□□□ -1.77
CD55-208ENST00000476590 SPNS3Q6ZMD2 512 aa3.99□□□□□ -1.77
CD55-208ENST00000476590 ZNF783Q6ZMS7 281 aa3.99□□□□□ -1.77
CD55-208ENST00000476590 SLC46A3Q7Z3Q1 461 aa3.99□□□□□ -1.77
CD55-208ENST00000476590 KRT25Q7Z3Z0 450 aa3.99□□□□□ -1.77
CD55-208ENST00000476590 PIWIL4Q7Z3Z4 852 aaKnown RBP3.99□□□□□ -1.77
CD55-208ENST00000476590 SLC51AQ86UW1 340 aa3.99□□□□□ -1.77
CD55-208ENST00000476590 MICU3Q86XE3 530 aa3.99□□□□□ -1.77
CD55-208ENST00000476590 MCEMP1Q8IX19 187 aa3.99□□□□□ -1.77
CD55-208ENST00000476590 DDIASQ8IXT1 998 aa3.99□□□□□ -1.77
CD55-208ENST00000476590 GUF1Q8N442 669 aaKnown RBP3.99□□□□□ -1.77
CD55-208ENST00000476590 LRRC18Q8N456 261 aa3.99□□□□□ -1.77
CD55-208ENST00000476590 CDYL2Q8N8U2 506 aa3.99□□□□□ -1.77
CD55-208ENST00000476590 ZNF383Q8NA42 475 aa3.99□□□□□ -1.77
CD55-208ENST00000476590 CHURC1Q8WUH1 139 aa3.99□□□□□ -1.77
CD55-208ENST00000476590 EXT2Q93063 718 aa3.99□□□□□ -1.77
CD55-208ENST00000476590 S100PBPQ96BU1 408 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms