RNA–Protein interactions for RNA: ENST00000475693.1

ATG4B-217, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 2,237 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-217ENST00000475693 TIA1P31483 386 aaKnown RBP eCLIP17.21■□□□□ 0.35
ATG4B-217ENST00000475693 AHRP35869 848 aa17.21■□□□□ 0.35
ATG4B-217ENST00000475693 ATP4BP51164 291 aa17.21■□□□□ 0.35
ATG4B-217ENST00000475693 POLR2JP52435 117 aaKnown RBP17.21■□□□□ 0.35
ATG4B-217ENST00000475693 EPHA4P54764 986 aa17.21■□□□□ 0.35
ATG4B-217ENST00000475693 PHC1P78364 1004 aa17.21■□□□□ 0.35
ATG4B-217ENST00000475693 PRSS53Q2L4Q9 553 aa17.21■□□□□ 0.35
ATG4B-217ENST00000475693 PROX2Q3B8N5 592 aa17.21■□□□□ 0.35
ATG4B-217ENST00000475693 CCDC157Q569K6 752 aa17.21■□□□□ 0.35
ATG4B-217ENST00000475693 SPANXN4Q5MJ08 99 aa17.21■□□□□ 0.35
ATG4B-217ENST00000475693 C1orf146Q5VVC0 180 aa17.21■□□□□ 0.35
ATG4B-217ENST00000475693 BLOC1S3Q6QNY0 202 aa17.21■□□□□ 0.35
ATG4B-217ENST00000475693 FAM181AQ8N9Y4 354 aa17.21■□□□□ 0.35
ATG4B-217ENST00000475693 RHBDD1Q8TEB9 315 aa17.21■□□□□ 0.35
ATG4B-217ENST00000475693 JADE3Q92613 823 aa17.21■□□□□ 0.35
ATG4B-217ENST00000475693 CMTM5Q96DZ9 223 aa17.21■□□□□ 0.35
ATG4B-217ENST00000475693 SLC39A3Q9BRY0 314 aa17.21■□□□□ 0.35
ATG4B-217ENST00000475693 THTPAQ9BU02 230 aa17.21■□□□□ 0.35
ATG4B-217ENST00000475693 C1GALT1Q9NS00 363 aa17.21■□□□□ 0.35
ATG4B-217ENST00000475693 RUVBL1Q9Y265 456 aaKnown RBP17.21■□□□□ 0.35
ATG4B-217ENST00000475693 NPIPB8E9PQR5 432 aa17.2■□□□□ 0.34
ATG4B-217ENST00000475693 DUX1O43812 170 aa17.2■□□□□ 0.34
ATG4B-217ENST00000475693 ZNF888P0CJ79 500 aaPredicted RBP17.2■□□□□ 0.34
ATG4B-217ENST00000475693 GPR3P46089 330 aa17.2■□□□□ 0.34
ATG4B-217ENST00000475693 TAS2R50P59544 299 aa17.2■□□□□ 0.34
ATG4B-217ENST00000475693 ZNF33BQ06732 778 aa17.2■□□□□ 0.34
ATG4B-217ENST00000475693 FAM174BQ3ZCQ3 159 aa17.2■□□□□ 0.34
ATG4B-217ENST00000475693 SPIN4Q56A73 249 aa17.2■□□□□ 0.34
ATG4B-217ENST00000475693 PAGE3Q5JUK9 113 aa17.2■□□□□ 0.34
ATG4B-217ENST00000475693 PRAMEF17Q5VTA0 474 aa17.2■□□□□ 0.34
ATG4B-217ENST00000475693 TRPV3Q8NET8 790 aa17.2■□□□□ 0.34
ATG4B-217ENST00000475693 RP9Q8TA86 221 aaKnown RBP17.2■□□□□ 0.34
ATG4B-217ENST00000475693 FCRL1Q96LA6 429 aa17.2■□□□□ 0.34
ATG4B-217ENST00000475693 GBP5Q96PP8 586 aa17.2■□□□□ 0.34
ATG4B-217ENST00000475693 C5AR2Q9P296 337 aa17.2■□□□□ 0.34
ATG4B-217ENST00000475693 NUP214P35658 2090 aaPredicted RBP17.2■□□□□ 0.34
ATG4B-217ENST00000475693 SCN2AQ99250 2005 aa17.2■□□□□ 0.34
ATG4B-217ENST00000475693 ZNF860A6NHJ4 632 aa17.2■□□□□ 0.34
ATG4B-217ENST00000475693 YKT6O15498 198 aa17.2■□□□□ 0.34
ATG4B-217ENST00000475693 THRAP10827 490 aa17.2■□□□□ 0.34
ATG4B-217ENST00000475693 NUDT2P50583 147 aa17.2■□□□□ 0.34
ATG4B-217ENST00000475693 SH3BGRP55822 239 aaPredicted RBP17.2■□□□□ 0.34
ATG4B-217ENST00000475693 OLR1P78380 273 aa17.2■□□□□ 0.34
ATG4B-217ENST00000475693 MAD2L1Q13257 205 aaPredicted RBP17.2■□□□□ 0.34
ATG4B-217ENST00000475693 PGS1Q32NB8 556 aa17.2■□□□□ 0.34
ATG4B-217ENST00000475693 CCNYL2Q5T2Q4 361 aa17.2■□□□□ 0.34
ATG4B-217ENST00000475693 FOXB2Q5VYV0 432 aa17.2■□□□□ 0.34
ATG4B-217ENST00000475693 SLC2A7Q6PXP3 512 aa17.2■□□□□ 0.34
ATG4B-217ENST00000475693 IZUMO2Q6UXV1 221 aa17.2■□□□□ 0.34
ATG4B-217ENST00000475693 RNF44Q7L0R7 432 aa17.2■□□□□ 0.34
ATG4B-217ENST00000475693 MCATQ8IVS2 390 aaKnown RBP17.2■□□□□ 0.34
ATG4B-217ENST00000475693 TM4SF19Q96DZ7 209 aa17.2■□□□□ 0.34
ATG4B-217ENST00000475693 ZDHHC12Q96GR4 267 aa17.2■□□□□ 0.34
ATG4B-217ENST00000475693 PITHD1Q9GZP4 211 aaPredicted RBP17.2■□□□□ 0.34
ATG4B-217ENST00000475693 SEMA4GQ9NTN9 838 aa17.2■□□□□ 0.34
ATG4B-217ENST00000475693 A0A088AWK7 358 aa17.19■□□□□ 0.34
ATG4B-217ENST00000475693 MED26O95402 600 aa17.19■□□□□ 0.34
ATG4B-217ENST00000475693 ZNF806P0C7X5 589 aa17.19■□□□□ 0.34
ATG4B-217ENST00000475693 CERS1P27544 350 aa17.19■□□□□ 0.34
ATG4B-217ENST00000475693 BTN3A2P78410 334 aa17.19■□□□□ 0.34
ATG4B-217ENST00000475693 DYNC1I2Q13409 638 aaKnown RBP17.19■□□□□ 0.34
ATG4B-217ENST00000475693 NR1D2Q14995 579 aa17.19■□□□□ 0.34
ATG4B-217ENST00000475693 OR4C11Q6IEV9 310 aa17.19■□□□□ 0.34
ATG4B-217ENST00000475693 ABHD17CQ6PCB6 329 aa17.19■□□□□ 0.34
ATG4B-217ENST00000475693 ANKRD46Q86W74 232 aa17.19■□□□□ 0.34
ATG4B-217ENST00000475693 C16orf78Q8WTQ4 265 aa17.19■□□□□ 0.34
ATG4B-217ENST00000475693 RGMAQ96B86 450 aa17.19■□□□□ 0.34
ATG4B-217ENST00000475693 CLPTM1LQ96KA5 538 aa17.19■□□□□ 0.34
ATG4B-217ENST00000475693 TMEM74Q96NL1 305 aa17.19■□□□□ 0.34
ATG4B-217ENST00000475693 SLC6A16Q9GZN6 736 aa17.19■□□□□ 0.34
ATG4B-217ENST00000475693 PRDM7Q9NQW5 492 aa17.19■□□□□ 0.34
ATG4B-217ENST00000475693 ZIM2Q9NZV7 527 aa17.19■□□□□ 0.34
ATG4B-217ENST00000475693 MAP10Q9P2G4 905 aa17.19■□□□□ 0.34
ATG4B-217ENST00000475693 TMED5Q9Y3A6 229 aa17.19■□□□□ 0.34
ATG4B-217ENST00000475693 KLK4Q9Y5K2 254 aa17.19■□□□□ 0.34
ATG4B-217ENST00000475693 TLCD2A6NGC4 264 aa17.19■□□□□ 0.34
ATG4B-217ENST00000475693 SORBS2O94875 1100 aaKnown RBP17.19■□□□□ 0.34
ATG4B-217ENST00000475693 CKMT1AP12532 417 aa17.19■□□□□ 0.34
ATG4B-217ENST00000475693 GPR19Q15760 415 aa17.19■□□□□ 0.34
ATG4B-217ENST00000475693 DEFB134Q4QY38 66 aa17.19■□□□□ 0.34
ATG4B-217ENST00000475693 REP15Q6BDI9 236 aa17.19■□□□□ 0.34
ATG4B-217ENST00000475693 DNAJC22Q8N4W6 341 aa17.19■□□□□ 0.34
ATG4B-217ENST00000475693 TBC1D19Q8N5T2 526 aa17.19■□□□□ 0.34
ATG4B-217ENST00000475693 TTLQ8NG68 377 aa17.19■□□□□ 0.34
ATG4B-217ENST00000475693 UTP15Q8TED0 518 aaKnown RBP17.19■□□□□ 0.34
ATG4B-217ENST00000475693 CNDP2Q96KP4 475 aaKnown RBP17.19■□□□□ 0.34
ATG4B-217ENST00000475693 TRIM4Q9C037 500 aa17.19■□□□□ 0.34
ATG4B-217ENST00000475693 S100A14Q9HCY8 104 aa17.19■□□□□ 0.34
ATG4B-217ENST00000475693 ASIC5Q9NY37 505 aa17.19■□□□□ 0.34
ATG4B-217ENST00000475693 ADGRE2Q9UHX3 823 aa17.19■□□□□ 0.34
ATG4B-217ENST00000475693 ZNF292O60281 2723 aa17.18■□□□□ 0.34
ATG4B-217ENST00000475693 GLOD5A6NK44 160 aa17.18■□□□□ 0.34
ATG4B-217ENST00000475693 MYO1DO94832 1006 aa17.18■□□□□ 0.34
ATG4B-217ENST00000475693 IL3P08700 152 aa17.18■□□□□ 0.34
ATG4B-217ENST00000475693 CD59P13987 128 aa17.18■□□□□ 0.34
ATG4B-217ENST00000475693 IL1RNP18510 177 aa17.18■□□□□ 0.34
ATG4B-217ENST00000475693 ITGAXP20702 1163 aa17.18■□□□□ 0.34
ATG4B-217ENST00000475693 SSR2P43308 183 aa17.18■□□□□ 0.34
ATG4B-217ENST00000475693 ACADVLP49748 655 aa17.18■□□□□ 0.34
ATG4B-217ENST00000475693 CLDN6P56747 220 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms