RNA–Protein interactions for RNA: ENST00000475288.5

PCGF3-209, Transcript of polycomb group ring finger 3, humanhuman

TSL 3

Gene PCGF3, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-209ENST00000475288 SPNS1Q9H2V7 528 aa16.63■□□□□ 0.25
PCGF3-209ENST00000475288 KCNN3Q9UGI6 736 aa16.63■□□□□ 0.25
PCGF3-209ENST00000475288 CORO1CQ9ULV4 474 aaPredicted RBP16.63■□□□□ 0.25
PCGF3-209ENST00000475288 RNF6Q9Y252 685 aa16.63■□□□□ 0.25
PCGF3-209ENST00000475288 PHF3Q92576 2039 aaKnown RBP16.62■□□□□ 0.25
PCGF3-209ENST00000475288 USP27XA6NNY8 438 aa16.62■□□□□ 0.25
PCGF3-209ENST00000475288 ITGA10O75578 1167 aa16.62■□□□□ 0.25
PCGF3-209ENST00000475288 TOXO94900 526 aa16.62■□□□□ 0.25
PCGF3-209ENST00000475288 TUBB4AP04350 444 aa16.62■□□□□ 0.25
PCGF3-209ENST00000475288 SERPIND1P05546 499 aa16.62■□□□□ 0.25
PCGF3-209ENST00000475288 SERPINA6P08185 405 aa16.62■□□□□ 0.25
PCGF3-209ENST00000475288 CCDC175P0C221 793 aa16.62■□□□□ 0.25
PCGF3-209ENST00000475288 CXCR5P32302 372 aa16.62■□□□□ 0.25
PCGF3-209ENST00000475288 GPR143P51810 404 aa16.62■□□□□ 0.25
PCGF3-209ENST00000475288 RBM20Q5T481 1227 aaKnown RBP16.62■□□□□ 0.25
PCGF3-209ENST00000475288 PAOXQ6QHF9 649 aa16.62■□□□□ 0.25
PCGF3-209ENST00000475288 RGS9BPQ6ZS82 235 aa16.62■□□□□ 0.25
PCGF3-209ENST00000475288 CEP128Q6ZU80 1094 aa16.62■□□□□ 0.25
PCGF3-209ENST00000475288 ACAD11Q709F0 780 aa16.62■□□□□ 0.25
PCGF3-209ENST00000475288 MAGOHBQ96A72 148 aaKnown RBP16.62■□□□□ 0.25
PCGF3-209ENST00000475288 VMP1Q96GC9 406 aa16.62■□□□□ 0.25
PCGF3-209ENST00000475288 AIF1LQ9BQI0 150 aa16.62■□□□□ 0.25
PCGF3-209ENST00000475288 NAT9Q9BTE0 207 aa16.62■□□□□ 0.25
PCGF3-209ENST00000475288 KCNJ16Q9NPI9 418 aa16.62■□□□□ 0.25
PCGF3-209ENST00000475288 TIMMDC1Q9NPL8 285 aa16.62■□□□□ 0.25
PCGF3-209ENST00000475288 LZTFL1Q9NQ48 299 aa16.62■□□□□ 0.25
PCGF3-209ENST00000475288 YARS2Q9Y2Z4 477 aaKnown RBP16.62■□□□□ 0.25
PCGF3-209ENST00000475288 TRBV11-1A0A0K0K1C0 115 aa16.61■□□□□ 0.25
PCGF3-209ENST00000475288 AHSGP02765 367 aa16.61■□□□□ 0.25
PCGF3-209ENST00000475288 HOXD4P09016 255 aaPredicted RBP16.61■□□□□ 0.25
PCGF3-209ENST00000475288 EMC4Q5J8M3 183 aa16.61■□□□□ 0.25
PCGF3-209ENST00000475288 NXPE4Q6UWF7 544 aa16.61■□□□□ 0.25
PCGF3-209ENST00000475288 MDGA2Q7Z553 956 aa16.61■□□□□ 0.25
PCGF3-209ENST00000475288 SCUBE1Q8IWY4 988 aa16.61■□□□□ 0.25
PCGF3-209ENST00000475288 PPIL6Q8IXY8 311 aa16.61■□□□□ 0.25
PCGF3-209ENST00000475288 CA13Q8N1Q1 262 aa16.61■□□□□ 0.25
PCGF3-209ENST00000475288 CREB3L4Q8TEY5 395 aa16.61■□□□□ 0.25
PCGF3-209ENST00000475288 ANKRD7Q92527 254 aa16.61■□□□□ 0.25
PCGF3-209ENST00000475288 NPLQ9BXD5 320 aaPredicted RBP16.61■□□□□ 0.25
PCGF3-209ENST00000475288 ZNF223Q9UK11 482 aaPredicted RBP16.61■□□□□ 0.25
PCGF3-209ENST00000475288 OR14I1A6ND48 311 aa16.6■□□□□ 0.25
PCGF3-209ENST00000475288 CDC40O60508 579 aaKnown RBP eCLIP16.6■□□□□ 0.25
PCGF3-209ENST00000475288 MYO1DO94832 1006 aa16.6■□□□□ 0.25
PCGF3-209ENST00000475288 RFC3P40938 356 aa16.6■□□□□ 0.25
PCGF3-209ENST00000475288 SSR4P51571 173 aa16.6■□□□□ 0.25
PCGF3-209ENST00000475288 HSD17B7P56937 341 aa16.6■□□□□ 0.25
PCGF3-209ENST00000475288 RAB8AP61006 207 aa16.6■□□□□ 0.25
PCGF3-209ENST00000475288 PDAP1Q13442 181 aaKnown RBP16.6■□□□□ 0.25
PCGF3-209ENST00000475288 PPP1R3AQ16821 1122 aa16.6■□□□□ 0.25
PCGF3-209ENST00000475288 SPANXN3Q5MJ09 141 aa16.6■□□□□ 0.25
PCGF3-209ENST00000475288 CCDC137Q6PK04 289 aaKnown RBP16.6■□□□□ 0.25
PCGF3-209ENST00000475288 SBSNQ6UWP8 590 aa16.6■□□□□ 0.25
PCGF3-209ENST00000475288 PSD4Q8NDX1 1056 aa16.6■□□□□ 0.25
PCGF3-209ENST00000475288 OR52N2Q8NGI0 321 aa16.6■□□□□ 0.25
PCGF3-209ENST00000475288 SEC16BQ96JE7 1060 aa16.6■□□□□ 0.25
PCGF3-209ENST00000475288 PDLIM2Q96JY6 352 aa16.6■□□□□ 0.25
PCGF3-209ENST00000475288 ZDHHC11Q9H8X9 412 aa16.6■□□□□ 0.25
PCGF3-209ENST00000475288 DYRK1BQ9Y463 629 aa16.6■□□□□ 0.25
PCGF3-209ENST00000475288 CLDN16Q9Y5I7 305 aa16.6■□□□□ 0.25
PCGF3-209ENST00000475288 ITPR3Q14573 2671 aa16.59■□□□□ 0.25
PCGF3-209ENST00000475288 FAM221AA4D161 298 aa16.59■□□□□ 0.25
PCGF3-209ENST00000475288 CTAGE15A4D2H0 777 aa16.59■□□□□ 0.25
PCGF3-209ENST00000475288 ZFAND5O76080 213 aa16.59■□□□□ 0.25
PCGF3-209ENST00000475288 GSTM2P28161 218 aa16.59■□□□□ 0.25
PCGF3-209ENST00000475288 STXBP1P61764 594 aaKnown RBP16.59■□□□□ 0.25
PCGF3-209ENST00000475288 RNASEH2BQ5TBB1 312 aaKnown RBP16.59■□□□□ 0.25
PCGF3-209ENST00000475288 CES4AQ5XG92 561 aa16.59■□□□□ 0.25
PCGF3-209ENST00000475288 CTAGE6Q86UF2 777 aa16.59■□□□□ 0.25
PCGF3-209ENST00000475288 THOC6Q86W42 341 aaKnown RBP16.59■□□□□ 0.25
PCGF3-209ENST00000475288 TTLQ8NG68 377 aa16.59■□□□□ 0.25
PCGF3-209ENST00000475288 GRK7Q8WTQ7 553 aa16.59■□□□□ 0.25
PCGF3-209ENST00000475288 GAL3ST3Q96A11 431 aa16.59■□□□□ 0.25
PCGF3-209ENST00000475288 TSNARE1Q96NA8 513 aa16.59■□□□□ 0.25
PCGF3-209ENST00000475288 NAP1L3Q99457 506 aaPredicted RBP16.59■□□□□ 0.25
PCGF3-209ENST00000475288 CCDC77Q9BR77 488 aa16.59■□□□□ 0.25
PCGF3-209ENST00000475288 ZNF559Q9BR84 538 aa16.59■□□□□ 0.25
PCGF3-209ENST00000475288 KLHL31Q9H511 634 aa16.59■□□□□ 0.25
PCGF3-209ENST00000475288 ADAP2Q9NPF8 381 aa16.59■□□□□ 0.25
PCGF3-209ENST00000475288 FBXW2Q9UKT8 454 aa16.59■□□□□ 0.25
PCGF3-209ENST00000475288 KCNE2Q9Y6J6 123 aa16.59■□□□□ 0.25
PCGF3-209ENST00000475288 INTS1Q8N201 2190 aaKnown RBP16.58■□□□□ 0.25
PCGF3-209ENST00000475288 SPG11Q96JI7 2443 aa16.58■□□□□ 0.25
PCGF3-209ENST00000475288 NKX2-6A6NCS4 301 aa16.58■□□□□ 0.24
PCGF3-209ENST00000475288 FAM90A27PA6NNH2 459 aa16.58■□□□□ 0.24
PCGF3-209ENST00000475288 A8MUA0 341 aa16.58■□□□□ 0.24
PCGF3-209ENST00000475288 C4orf51C9J302 202 aa16.58■□□□□ 0.24
PCGF3-209ENST00000475288 ACOT7O00154 380 aa16.58■□□□□ 0.24
PCGF3-209ENST00000475288 CLDN4O14493 209 aa16.58■□□□□ 0.24
PCGF3-209ENST00000475288 GUCA1CO95843 209 aa16.58■□□□□ 0.24
PCGF3-209ENST00000475288 HNF4AP41235 474 aa16.58■□□□□ 0.24
PCGF3-209ENST00000475288 ART1P52961 327 aa16.58■□□□□ 0.24
PCGF3-209ENST00000475288 GPR85P60893 370 aa16.58■□□□□ 0.24
PCGF3-209ENST00000475288 CDKL1Q00532 357 aa16.58■□□□□ 0.24
PCGF3-209ENST00000475288 HECTD2Q5U5R9 776 aa16.58■□□□□ 0.24
PCGF3-209ENST00000475288 FAM45BPQ6NSW5 357 aa16.58■□□□□ 0.24
PCGF3-209ENST00000475288 TMPRSS11BQ86T26 416 aa16.58■□□□□ 0.24
PCGF3-209ENST00000475288 ZNF595Q8IYB9 648 aa16.58■□□□□ 0.24
PCGF3-209ENST00000475288 CLYBLQ8N0X4 340 aa16.58■□□□□ 0.24
PCGF3-209ENST00000475288 FAM45AQ8TCE6 357 aa16.58■□□□□ 0.24
PCGF3-209ENST00000475288 NCLNQ969V3 563 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms