RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 F2RL3Q96RI0 385 aa6.3□□□□□ -1.4
ATG4A-207ENST00000474825 ZBTB18Q99592 522 aa6.3□□□□□ -1.4
ATG4A-207ENST00000474825 ZFYVE21Q9BQ24 234 aa6.3□□□□□ -1.4
ATG4A-207ENST00000474825 TBCDQ9BTW9 1192 aa6.3□□□□□ -1.4
ATG4A-207ENST00000474825 THTPAQ9BU02 230 aa6.3□□□□□ -1.4
ATG4A-207ENST00000474825 CNTNAP3Q9BZ76 1288 aa6.3□□□□□ -1.4
ATG4A-207ENST00000474825 BHLHE41Q9C0J9 482 aaPredicted RBP6.3□□□□□ -1.4
ATG4A-207ENST00000474825 REXO4Q9GZR2 422 aaKnown RBP6.3□□□□□ -1.4
ATG4A-207ENST00000474825 REEP4Q9H6H4 257 aa6.3□□□□□ -1.4
ATG4A-207ENST00000474825 SPAG4Q9NPE6 437 aa6.3□□□□□ -1.4
ATG4A-207ENST00000474825 FAM120CQ9NX05 1096 aaKnown RBP6.3□□□□□ -1.4
ATG4A-207ENST00000474825 PDP2Q9P2J9 529 aa6.3□□□□□ -1.4
ATG4A-207ENST00000474825 SLC7A8Q9UHI5 535 aa6.3□□□□□ -1.4
ATG4A-207ENST00000474825 BTNL2Q9UIR0 455 aa6.3□□□□□ -1.4
ATG4A-207ENST00000474825 CROTQ9UKG9 612 aa6.3□□□□□ -1.4
ATG4A-207ENST00000474825 DOLKQ9UPQ8 538 aa6.3□□□□□ -1.4
ATG4A-207ENST00000474825 ERVK-11Q9UQG0 969 aa6.3□□□□□ -1.4
ATG4A-207ENST00000474825 BTBD3Q9Y2F9 522 aa6.3□□□□□ -1.4
ATG4A-207ENST00000474825 PCDHA9Q9Y5H5 950 aa6.3□□□□□ -1.4
ATG4A-207ENST00000474825 RNF215Q9Y6U7 377 aa6.3□□□□□ -1.4
ATG4A-207ENST00000474825 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.3□□□□□ -1.4
ATG4A-207ENST00000474825 U3KQA8 63 aa6.3□□□□□ -1.4
ATG4A-207ENST00000474825 SPAG17Q6Q759 2223 aa6.3□□□□□ -1.4
ATG4A-207ENST00000474825 MN1Q10571 1320 aaPredicted RBP6.29□□□□□ -1.4
ATG4A-207ENST00000474825 CEP192Q8TEP8 1941 aa6.29□□□□□ -1.4
ATG4A-207ENST00000474825 IGHV1OR21-1A0A087WYE8 117 aa6.29□□□□□ -1.4
ATG4A-207ENST00000474825 A0A096LPI6 279 aa6.29□□□□□ -1.4
ATG4A-207ENST00000474825 C15orf38-AP3S2A0A0A6YYH1 394 aa6.29□□□□□ -1.4
ATG4A-207ENST00000474825 PRSS51A0A1B0GVH4 220 aa6.29□□□□□ -1.4
ATG4A-207ENST00000474825 GSAPA4D1B5 854 aa6.29□□□□□ -1.4
ATG4A-207ENST00000474825 EME2A4GXA9 379 aaPredicted RBP6.29□□□□□ -1.4
ATG4A-207ENST00000474825 TLCD2A6NGC4 264 aa6.29□□□□□ -1.4
ATG4A-207ENST00000474825 C4orf51C9J302 202 aa6.29□□□□□ -1.4
ATG4A-207ENST00000474825 C9JVG2 144 aa6.29□□□□□ -1.4
ATG4A-207ENST00000474825 H3BMH7 237 aa6.29□□□□□ -1.4
ATG4A-207ENST00000474825 RNASET2O00584 256 aaKnown RBP6.29□□□□□ -1.4
ATG4A-207ENST00000474825 TRIM38O00635 465 aa6.29□□□□□ -1.4
ATG4A-207ENST00000474825 ACOT8O14734 319 aa6.29□□□□□ -1.4
ATG4A-207ENST00000474825 TOX3O15405 576 aaPredicted RBP6.29□□□□□ -1.4
ATG4A-207ENST00000474825 ZSCAN9O15535 394 aaPredicted RBP6.29□□□□□ -1.4
ATG4A-207ENST00000474825 ZW10O43264 779 aa6.29□□□□□ -1.4
ATG4A-207ENST00000474825 TMPRSS11DO60235 418 aa6.29□□□□□ -1.4
ATG4A-207ENST00000474825 SDC3O75056 442 aa6.29□□□□□ -1.4
ATG4A-207ENST00000474825 KLK1P06870 262 aa6.29□□□□□ -1.4
ATG4A-207ENST00000474825 ZCCHC18P0CG32 403 aa6.29□□□□□ -1.4
ATG4A-207ENST00000474825 PIM1P11309 404 aaPredicted RBP6.29□□□□□ -1.4
ATG4A-207ENST00000474825 HSD17B1P14061 328 aa6.29□□□□□ -1.4
ATG4A-207ENST00000474825 DRD2P14416 443 aa6.29□□□□□ -1.4
ATG4A-207ENST00000474825 ST6GAL1P15907 406 aa6.29□□□□□ -1.4
ATG4A-207ENST00000474825 TYRP1P17643 537 aa6.29□□□□□ -1.4
ATG4A-207ENST00000474825 HIST1H1TP22492 207 aaPredicted RBP6.29□□□□□ -1.4
ATG4A-207ENST00000474825 ATP5A1P25705 553 aaKnown RBP6.29□□□□□ -1.4
ATG4A-207ENST00000474825 CD1CP29017 333 aa6.29□□□□□ -1.4
ATG4A-207ENST00000474825 S100A3P33764 101 aa6.29□□□□□ -1.4
ATG4A-207ENST00000474825 DGKQP52824 942 aa6.29□□□□□ -1.4
ATG4A-207ENST00000474825 NME5P56597 212 aa6.29□□□□□ -1.4
ATG4A-207ENST00000474825 ACTR3P61158 418 aa6.29□□□□□ -1.4
ATG4A-207ENST00000474825 STXBP1P61764 594 aaKnown RBP6.29□□□□□ -1.4
ATG4A-207ENST00000474825 GPLD1P80108 840 aa6.29□□□□□ -1.4
ATG4A-207ENST00000474825 CFHR1Q03591 330 aa6.29□□□□□ -1.4
ATG4A-207ENST00000474825 KLC1Q07866 573 aa6.29□□□□□ -1.4
ATG4A-207ENST00000474825 CEACAM7Q14002 265 aa6.29□□□□□ -1.4
ATG4A-207ENST00000474825 MLC1Q15049 377 aa6.29□□□□□ -1.4
ATG4A-207ENST00000474825 CEBPEQ15744 281 aa6.29□□□□□ -1.4
ATG4A-207ENST00000474825 MAPKAPK3Q16644 382 aa6.29□□□□□ -1.4
ATG4A-207ENST00000474825 CLPPQ16740 277 aaPredicted RBP6.29□□□□□ -1.4
ATG4A-207ENST00000474825 MPEG1Q2M385 716 aa6.29□□□□□ -1.4
ATG4A-207ENST00000474825 PRTGQ2VWP7 1150 aa6.29□□□□□ -1.4
ATG4A-207ENST00000474825 INAVAQ3KP66 663 aa6.29□□□□□ -1.4
ATG4A-207ENST00000474825 FAM174BQ3ZCQ3 159 aa6.29□□□□□ -1.4
ATG4A-207ENST00000474825 MMEL1Q495T6 779 aa6.29□□□□□ -1.4
ATG4A-207ENST00000474825 TIGD2Q4W5G0 525 aa6.29□□□□□ -1.4
ATG4A-207ENST00000474825 NANOGP8Q6NSW7 305 aa6.29□□□□□ -1.4
ATG4A-207ENST00000474825 TMEM214Q6NUQ4 689 aaKnown RBP6.29□□□□□ -1.4
ATG4A-207ENST00000474825 CYB5D1Q6P9G0 228 aa6.29□□□□□ -1.4
ATG4A-207ENST00000474825 SLC2A7Q6PXP3 512 aa6.29□□□□□ -1.4
ATG4A-207ENST00000474825 WDR74Q6RFH5 385 aaPredicted RBP6.29□□□□□ -1.4
ATG4A-207ENST00000474825 ZNF793Q6ZN11 406 aa6.29□□□□□ -1.4
ATG4A-207ENST00000474825 MED25Q71SY5 747 aa6.29□□□□□ -1.4
ATG4A-207ENST00000474825 CEP68Q76N32 757 aa6.29□□□□□ -1.4
ATG4A-207ENST00000474825 GPR155Q7Z3F1 870 aa6.29□□□□□ -1.4
ATG4A-207ENST00000474825 R3HCC1LQ7Z5L2 792 aaKnown RBP6.29□□□□□ -1.4
ATG4A-207ENST00000474825 NET1Q7Z628 596 aaPredicted RBP6.29□□□□□ -1.4
ATG4A-207ENST00000474825 ARPINQ7Z6K5 226 aa6.29□□□□□ -1.4
ATG4A-207ENST00000474825 TRIM73Q86UV7 250 aa6.29□□□□□ -1.4
ATG4A-207ENST00000474825 GPR180Q86V85 440 aa6.29□□□□□ -1.4
ATG4A-207ENST00000474825 NUDT13Q86X67 352 aa6.29□□□□□ -1.4
ATG4A-207ENST00000474825 PTRH1Q86Y79 214 aaKnown RBP6.29□□□□□ -1.4
ATG4A-207ENST00000474825 MSRB3Q8IXL7 192 aa6.29□□□□□ -1.4
ATG4A-207ENST00000474825 SLC15A3Q8IY34 581 aa6.29□□□□□ -1.4
ATG4A-207ENST00000474825 FANCMQ8IYD8 2048 aa6.29□□□□□ -1.4
ATG4A-207ENST00000474825 KIAA2013Q8IYS2 634 aa6.29□□□□□ -1.4
ATG4A-207ENST00000474825 OR8J3Q8NGG0 315 aa6.29□□□□□ -1.4
ATG4A-207ENST00000474825 UTP15Q8TED0 518 aaKnown RBP6.29□□□□□ -1.4
ATG4A-207ENST00000474825 NUDT8Q8WV74 236 aa6.29□□□□□ -1.4
ATG4A-207ENST00000474825 GAL3ST3Q96A11 431 aa6.29□□□□□ -1.4
ATG4A-207ENST00000474825 TMEM125Q96AQ2 219 aa6.29□□□□□ -1.4
ATG4A-207ENST00000474825 MCUR1Q96AQ8 359 aa6.29□□□□□ -1.4
ATG4A-207ENST00000474825 TCTN2Q96GX1 697 aa6.29□□□□□ -1.4
ATG4A-207ENST00000474825 CCDC115Q96NT0 180 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms