RNA–Protein interactions for RNA: ENST00000474008.1

SRCAP-204, Transcript of Snf2 related CREBBP activator protein, humanhuman

TSL 3

Gene SRCAP, Length 730 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRCAP-204ENST00000474008 CDC40O60508 579 aaKnown RBP eCLIP11.1□□□□□ -0.63
SRCAP-204ENST00000474008 GUCA1CO95843 209 aa11.1□□□□□ -0.63
SRCAP-204ENST00000474008 AHSGP02765 367 aa11.1□□□□□ -0.63
SRCAP-204ENST00000474008 ENO3P13929 434 aaPredicted RBP11.1□□□□□ -0.63
SRCAP-204ENST00000474008 ALOX12P18054 663 aa11.1□□□□□ -0.63
SRCAP-204ENST00000474008 PAMP19021 973 aa11.1□□□□□ -0.63
SRCAP-204ENST00000474008 AGAP20933 346 aa11.1□□□□□ -0.63
SRCAP-204ENST00000474008 AGTR2P50052 363 aa11.1□□□□□ -0.63
SRCAP-204ENST00000474008 MEOX1P50221 254 aa11.1□□□□□ -0.63
SRCAP-204ENST00000474008 HNRNPFP52597 415 aaKnown RBP11.1□□□□□ -0.63
SRCAP-204ENST00000474008 CMPK2Q5EBM0 449 aa11.1□□□□□ -0.63
SRCAP-204ENST00000474008 LCTLQ6UWM7 567 aa11.1□□□□□ -0.63
SRCAP-204ENST00000474008 PCGF5Q86SE9 256 aa11.1□□□□□ -0.63
SRCAP-204ENST00000474008 CDH24Q86UP0 819 aa11.1□□□□□ -0.63
SRCAP-204ENST00000474008 SLC5A8Q8N695 610 aa11.1□□□□□ -0.63
SRCAP-204ENST00000474008 NAT8LQ8N9F0 302 aa11.1□□□□□ -0.63
SRCAP-204ENST00000474008 OR4K1Q8NGD4 311 aa11.1□□□□□ -0.63
SRCAP-204ENST00000474008 MCOLN3Q8TDD5 553 aa11.1□□□□□ -0.63
SRCAP-204ENST00000474008 UTP15Q8TED0 518 aaKnown RBP11.1□□□□□ -0.63
SRCAP-204ENST00000474008 NEIL2Q969S2 332 aa11.1□□□□□ -0.63
SRCAP-204ENST00000474008 MAGOHBQ96A72 148 aaKnown RBP11.1□□□□□ -0.63
SRCAP-204ENST00000474008 SNF8Q96H20 258 aa11.1□□□□□ -0.63
SRCAP-204ENST00000474008 ENKD1Q9H0I2 346 aa11.1□□□□□ -0.63
SRCAP-204ENST00000474008 DEFB127Q9H1M4 99 aa11.1□□□□□ -0.63
SRCAP-204ENST00000474008 CCDC68Q9H2F9 335 aa11.1□□□□□ -0.63
SRCAP-204ENST00000474008 TIMMDC1Q9NPL8 285 aa11.1□□□□□ -0.63
SRCAP-204ENST00000474008 KLHL42Q9P2K6 505 aa11.1□□□□□ -0.63
SRCAP-204ENST00000474008 TRMT6Q9UJA5 497 aaKnown RBP11.1□□□□□ -0.63
SRCAP-204ENST00000474008 CLDN16Q9Y5I7 305 aa11.1□□□□□ -0.63
SRCAP-204ENST00000474008 PRRC2AP48634 2157 aaKnown RBP11.1□□□□□ -0.63
SRCAP-204ENST00000474008 HRNRQ86YZ3 2850 aaPredicted RBP11.1□□□□□ -0.63
SRCAP-204ENST00000474008 IGKV3D-11A0A0A0MRZ8 115 aa11.09□□□□□ -0.63
SRCAP-204ENST00000474008 TMEM200CA6NKL6 621 aa11.09□□□□□ -0.63
SRCAP-204ENST00000474008 FAM90A27PA6NNH2 459 aa11.09□□□□□ -0.63
SRCAP-204ENST00000474008 E9PLN8 166 aa11.09□□□□□ -0.63
SRCAP-204ENST00000474008 AP3B1O00203 1094 aa11.09□□□□□ -0.63
SRCAP-204ENST00000474008 TPOP07202 933 aa11.09□□□□□ -0.63
SRCAP-204ENST00000474008 THBS1P07996 1170 aa11.09□□□□□ -0.63
SRCAP-204ENST00000474008 MSX1P28360 303 aa11.09□□□□□ -0.63
SRCAP-204ENST00000474008 SSTR2P30874 369 aa11.09□□□□□ -0.63
SRCAP-204ENST00000474008 CYB561P49447 251 aa11.09□□□□□ -0.63
SRCAP-204ENST00000474008 CCR8P51685 355 aa11.09□□□□□ -0.63
SRCAP-204ENST00000474008 AP2B1P63010 937 aa11.09□□□□□ -0.63
SRCAP-204ENST00000474008 XKR6Q5GH73 641 aa11.09□□□□□ -0.63
SRCAP-204ENST00000474008 ADNP2Q6IQ32 1131 aa11.09□□□□□ -0.63
SRCAP-204ENST00000474008 C4orf22Q6V702 233 aa11.09□□□□□ -0.63
SRCAP-204ENST00000474008 GHDCQ8N2G8 530 aa11.09□□□□□ -0.63
SRCAP-204ENST00000474008 TMEM178AQ8NBL3 297 aa11.09□□□□□ -0.63
SRCAP-204ENST00000474008 APCDD1LQ8NCL9 501 aa11.09□□□□□ -0.63
SRCAP-204ENST00000474008 C2CD4AQ8NCU7 369 aaPredicted RBP11.09□□□□□ -0.63
SRCAP-204ENST00000474008 MCUQ8NE86 351 aa11.09□□□□□ -0.63
SRCAP-204ENST00000474008 ABHD11Q8NFV4 315 aa11.09□□□□□ -0.63
SRCAP-204ENST00000474008 OR56A3Q8NH54 315 aa11.09□□□□□ -0.63
SRCAP-204ENST00000474008 OLFM1Q99784 485 aa11.09□□□□□ -0.63
SRCAP-204ENST00000474008 SPOCK3Q9BQ16 436 aa11.09□□□□□ -0.63
SRCAP-204ENST00000474008 VKORC1Q9BQB6 163 aa11.09□□□□□ -0.63
SRCAP-204ENST00000474008 WDR83Q9BRX9 315 aaKnown RBP11.09□□□□□ -0.63
SRCAP-204ENST00000474008 GPAMQ9HCL2 828 aa11.09□□□□□ -0.63
SRCAP-204ENST00000474008 ZFATQ9P243 1243 aa11.09□□□□□ -0.63
SRCAP-204ENST00000474008 DYRK1BQ9Y463 629 aa11.09□□□□□ -0.63
SRCAP-204ENST00000474008 ZNF407Q9C0G0 2248 aa11.08□□□□□ -0.64
SRCAP-204ENST00000474008 TRBV11-1A0A0K0K1C0 115 aa11.08□□□□□ -0.64
SRCAP-204ENST00000474008 PEX1O43933 1283 aa11.08□□□□□ -0.64
SRCAP-204ENST00000474008 ZNF354AO60765 605 aaPredicted RBP11.08□□□□□ -0.64
SRCAP-204ENST00000474008 MYO1DO94832 1006 aa11.08□□□□□ -0.64
SRCAP-204ENST00000474008 SMIM10L1P0DMW3 83 aa11.08□□□□□ -0.64
SRCAP-204ENST00000474008 MYBL2P10244 700 aa11.08□□□□□ -0.64
SRCAP-204ENST00000474008 HRH2P25021 359 aa11.08□□□□□ -0.64
SRCAP-204ENST00000474008 HLCSP50747 726 aa11.08□□□□□ -0.64
SRCAP-204ENST00000474008 TFF3Q07654 80 aa11.08□□□□□ -0.64
SRCAP-204ENST00000474008 RUNX2Q13950 521 aa11.08□□□□□ -0.64
SRCAP-204ENST00000474008 ZNF460Q14592 562 aa11.08□□□□□ -0.64
SRCAP-204ENST00000474008 CRYMQ14894 314 aa11.08□□□□□ -0.64
SRCAP-204ENST00000474008 HERC3Q15034 1050 aa11.08□□□□□ -0.64
SRCAP-204ENST00000474008 FBXO48Q5FWF7 155 aa11.08□□□□□ -0.64
SRCAP-204ENST00000474008 TRMT10BQ6PF06 316 aaKnown RBP11.08□□□□□ -0.64
SRCAP-204ENST00000474008 CLNKQ7Z7G1 428 aa11.08□□□□□ -0.64
SRCAP-204ENST00000474008 CA13Q8N1Q1 262 aa11.08□□□□□ -0.64
SRCAP-204ENST00000474008 ZNF321PQ8N8H1 164 aa11.08□□□□□ -0.64
SRCAP-204ENST00000474008 FAM57AQ8TBR7 257 aa11.08□□□□□ -0.64
SRCAP-204ENST00000474008 CA5BP1Q8WTZ4 195 aa11.08□□□□□ -0.64
SRCAP-204ENST00000474008 SMIM10Q96HG1 83 aa11.08□□□□□ -0.64
SRCAP-204ENST00000474008 OR1F2PQ96R84 312 aa11.08□□□□□ -0.64
SRCAP-204ENST00000474008 TREX2Q9BQ50 279 aaPredicted RBP11.08□□□□□ -0.64
SRCAP-204ENST00000474008 LIME1Q9H400 295 aa11.08□□□□□ -0.64
SRCAP-204ENST00000474008 TRIM45Q9H8W5 580 aaPredicted RBP11.08□□□□□ -0.64
SRCAP-204ENST00000474008 MCCC2Q9HCC0 563 aa11.08□□□□□ -0.64
SRCAP-204ENST00000474008 PNO1Q9NRX1 252 aaKnown RBP11.08□□□□□ -0.64
SRCAP-204ENST00000474008 ARL15Q9NXU5 204 aa11.08□□□□□ -0.64
SRCAP-204ENST00000474008 KCMF1Q9P0J7 381 aa11.08□□□□□ -0.64
SRCAP-204ENST00000474008 RNF6Q9Y252 685 aa11.08□□□□□ -0.64
SRCAP-204ENST00000474008 ZKSCAN5Q9Y2L8 839 aa11.08□□□□□ -0.64
SRCAP-204ENST00000474008 LIPGQ9Y5X9 500 aa11.08□□□□□ -0.64
SRCAP-204ENST00000474008 NAV3Q8IVL0 2385 aa11.08□□□□□ -0.64
SRCAP-204ENST00000474008 INTS1Q8N201 2190 aaKnown RBP11.07□□□□□ -0.64
SRCAP-204ENST00000474008 TCRBV16S1A1N1A0A5B0 115 aa11.07□□□□□ -0.64
SRCAP-204ENST00000474008 TRBC2A0A5B9 178 aa11.07□□□□□ -0.64
SRCAP-204ENST00000474008 MAGEB16A2A368 324 aa11.07□□□□□ -0.64
SRCAP-204ENST00000474008 SAGE2PA6NJ88 616 aa11.07□□□□□ -0.64
SRCAP-204ENST00000474008 FAM166BA8MTA8 275 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms