RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 DMPKQ09013 629 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 COX10Q12887 443 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 DUSP4Q13115 394 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 OCLNQ16625 522 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 TBRG1Q3YBR2 411 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 SYTL3Q4VX76 610 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 TRIQKQ629K1 86 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 BICRALQ6AI39 1079 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 FRMPD2BQ6IN97 320 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 MED27Q6P2C8 311 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 FAM131AQ6UXB0 335 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 C16orf59Q7L2K0 433 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 HDDC2Q7Z4H3 204 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 FAM124AQ86V42 546 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 TCTE3Q8IZS6 198 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 CYP4Z2PQ8N1L4 340 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 CLDN19Q8N6F1 224 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 OR10Q1Q8NGQ4 319 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 BTN2A2Q8WVV5 523 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 ASB15Q8WXK1 588 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 PPCDCQ96CD2 204 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 MYEOVQ96EZ4 313 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 MED30Q96HR3 178 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 KLF16Q9BXK1 252 aaPredicted RBP5.88□□□□□ -1.47
HERC4-209ENST00000473533 NLNQ9BYT8 704 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 NDUFB11Q9NX14 153 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 SH3BP4Q9P0V3 963 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 NDOR1Q9UHB4 597 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 ITM2BQ9Y287 266 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 CARD8Q9Y2G2 431 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 PPIL1Q9Y3C6 166 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 PCDHB7Q9Y5E2 793 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 SNX8Q9Y5X2 465 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 BACE2Q9Y5Z0 518 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 KCNE2Q9Y6J6 123 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 FOXE1O00358 373 aaPredicted RBP5.87□□□□□ -1.47
HERC4-209ENST00000473533 HOXC11O43248 304 aaPredicted RBP5.87□□□□□ -1.47
HERC4-209ENST00000473533 SEC14L5O43304 696 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 SH3BP5O60239 455 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 CLDN7O95471 211 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 ALPPP05187 535 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 ARAFP10398 606 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 LAMP1P11279 417 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 SPNP16150 400 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 ATF6P18850 670 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 EPORP19235 508 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 CPN2P22792 545 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 SLC9A3P48764 834 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 ALDH6A1Q02252 535 aaKnown RBP5.87□□□□□ -1.47
HERC4-209ENST00000473533 C19orf57Q0VDD7 668 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 HSPA14Q0VDF9 509 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 ILKQ13418 452 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 PTGES3Q15185 160 aaKnown RBP5.87□□□□□ -1.47
HERC4-209ENST00000473533 BCL7AQ4VC05 210 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 GPAT3Q53EU6 434 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 CLLU1OSQ5K130 101 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 PRSS36Q5K4E3 855 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 MPP7Q5T2T1 576 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 CCNJQ5T5M9 372 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 TPGS2Q68CL5 300 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 PLET1Q6UQ28 207 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 RNF19BQ6ZMZ0 732 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 VN1R5Q7Z5H4 357 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 THOC6Q86W42 341 aaKnown RBP5.87□□□□□ -1.47
HERC4-209ENST00000473533 GJD3Q8N144 294 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 TTC16Q8NEE8 873 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 WDR20Q8TBZ3 569 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 GPR152Q8TDT2 470 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 SCRN2Q96FV2 425 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 KCTD7Q96MP8 289 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 SAMD11Q96NU1 681 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 SGIP1Q9BQI5 828 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 CLSTN3Q9BQT9 956 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 TMEM246Q9BRR3 403 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 SLC35A5Q9BS91 424 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 CNPPD1Q9BV87 410 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 EBPLQ9BY08 206 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 BRD9Q9H8M2 597 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 MAFFQ9ULX9 164 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 SLC22A14Q9Y267 594 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 FCF1Q9Y324 198 aaKnown RBP5.87□□□□□ -1.47
HERC4-209ENST00000473533 DYRK1BQ9Y463 629 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 XIRP2A4UGR9 3374 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 FABP12A6NFH5 140 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 GFRA2O00451 464 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 STK25O00506 426 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 PITPNM1O00562 1244 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 SLC30A4O14863 429 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 PCDH7O60245 1069 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 TSPAN3O60637 253 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 GPR37L1O60883 481 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 NBNO60934 754 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 TNFRSF21O75509 655 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 GSTM3P21266 225 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 IDSP22304 550 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 MYL9P24844 172 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 CNTN1Q12860 1018 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 MRPL28Q13084 256 aaKnown RBP5.87□□□□□ -1.47
HERC4-209ENST00000473533 SLC14A1Q13336 389 aa5.87□□□□□ -1.47
HERC4-209ENST00000473533 CCL14Q16627 93 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms