RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 NEK2P51955 445 aa12.39□□□□□ -0.43
TPM3-216ENST00000473036 MAGOHP61326 146 aaKnown RBP12.39□□□□□ -0.43
TPM3-216ENST00000473036 HERVK_113P63132 956 aa12.39□□□□□ -0.43
TPM3-216ENST00000473036 MC1RQ01726 317 aa12.39□□□□□ -0.43
TPM3-216ENST00000473036 RGS1Q08116 209 aa12.39□□□□□ -0.43
TPM3-216ENST00000473036 RUNX2Q13950 521 aa12.39□□□□□ -0.43
TPM3-216ENST00000473036 SSPNQ14714 243 aa12.39□□□□□ -0.43
TPM3-216ENST00000473036 NDUFA9Q16795 377 aa12.39□□□□□ -0.43
TPM3-216ENST00000473036 LETMD1Q6P1Q0 360 aa12.39□□□□□ -0.43
TPM3-216ENST00000473036 ZYG11AQ6WRX3 759 aa12.39□□□□□ -0.43
TPM3-216ENST00000473036 ZNF793Q6ZN11 406 aa12.39□□□□□ -0.43
TPM3-216ENST00000473036 MRGPREQ86SM8 312 aa12.39□□□□□ -0.43
TPM3-216ENST00000473036 EXOC3L1Q86VI1 746 aa12.39□□□□□ -0.43
TPM3-216ENST00000473036 HOMEZQ8IX15 550 aa12.39□□□□□ -0.43
TPM3-216ENST00000473036 KRT78Q8N1N4 520 aa12.39□□□□□ -0.43
TPM3-216ENST00000473036 OR51Q1Q8NH59 317 aa12.39□□□□□ -0.43
TPM3-216ENST00000473036 HUS1BQ8NHY5 278 aa12.39□□□□□ -0.43
TPM3-216ENST00000473036 RDH11Q8TC12 318 aa12.39□□□□□ -0.43
TPM3-216ENST00000473036 CCDC126Q96EE4 140 aa12.39□□□□□ -0.43
TPM3-216ENST00000473036 APOPT1Q96IL0 206 aa12.39□□□□□ -0.43
TPM3-216ENST00000473036 C17orf62Q9BQA9 187 aa12.39□□□□□ -0.43
TPM3-216ENST00000473036 NTMT1Q9BV86 223 aa12.39□□□□□ -0.43
TPM3-216ENST00000473036 ERVK-6Q9BXR3 956 aa12.39□□□□□ -0.43
TPM3-216ENST00000473036 MS4A8Q9BY19 250 aa12.39□□□□□ -0.43
TPM3-216ENST00000473036 PITHD1Q9GZP4 211 aaPredicted RBP12.39□□□□□ -0.43
TPM3-216ENST00000473036 GSTO2Q9H4Y5 243 aa12.39□□□□□ -0.43
TPM3-216ENST00000473036 ANKHQ9HCJ1 492 aa12.39□□□□□ -0.43
TPM3-216ENST00000473036 PRDM7Q9NQW5 492 aa12.39□□□□□ -0.43
TPM3-216ENST00000473036 LANCL2Q9NS86 450 aa12.39□□□□□ -0.43
TPM3-216ENST00000473036 NKIRAS1Q9NYS0 192 aa12.39□□□□□ -0.43
TPM3-216ENST00000473036 SLC17A7Q9P2U7 560 aa12.39□□□□□ -0.43
TPM3-216ENST00000473036 ZNF282Q9UDV7 671 aaPredicted RBP12.39□□□□□ -0.43
TPM3-216ENST00000473036 CDC14AQ9UNH5 594 aa12.39□□□□□ -0.43
TPM3-216ENST00000473036 MAP4K5Q9Y4K4 846 aa12.39□□□□□ -0.43
TPM3-216ENST00000473036 HS3ST3B1Q9Y662 390 aa12.39□□□□□ -0.43
TPM3-216ENST00000473036 UNC79Q9P2D8 2635 aa12.38□□□□□ -0.43
TPM3-216ENST00000473036 ARGFXA6NJG6 315 aa12.38□□□□□ -0.43
TPM3-216ENST00000473036 H0YIV9 168 aa12.38□□□□□ -0.43
TPM3-216ENST00000473036 K7EM74 188 aa12.38□□□□□ -0.43
TPM3-216ENST00000473036 RTCAO00442 366 aaKnown RBP12.38□□□□□ -0.43
TPM3-216ENST00000473036 UBFD1O14562 309 aaKnown RBP12.38□□□□□ -0.43
TPM3-216ENST00000473036 ALOX12BO75342 701 aa12.38□□□□□ -0.43
TPM3-216ENST00000473036 TGFB1P01137 390 aa12.38□□□□□ -0.43
TPM3-216ENST00000473036 PIM1P11309 404 aaPredicted RBP12.38□□□□□ -0.43
TPM3-216ENST00000473036 PCNAP12004 261 aa12.38□□□□□ -0.43
TPM3-216ENST00000473036 TAC1P20366 129 aa12.38□□□□□ -0.43
TPM3-216ENST00000473036 IMPDH1P20839 514 aa12.38□□□□□ -0.43
TPM3-216ENST00000473036 AVPR1BP47901 424 aa12.38□□□□□ -0.43
TPM3-216ENST00000473036 POLE2P56282 527 aa12.38□□□□□ -0.43
TPM3-216ENST00000473036 NAA20P61599 178 aa12.38□□□□□ -0.43
TPM3-216ENST00000473036 ASPHQ12797 758 aa12.38□□□□□ -0.43
TPM3-216ENST00000473036 LAPTM5Q13571 262 aa12.38□□□□□ -0.43
TPM3-216ENST00000473036 HERC3Q15034 1050 aa12.38□□□□□ -0.43
TPM3-216ENST00000473036 CPSF6Q16630 551 aaKnown RBP eCLIP12.38□□□□□ -0.438e-8■□□□□ 8.8
TPM3-216ENST00000473036 TUBB8Q3ZCM7 444 aa12.38□□□□□ -0.43
TPM3-216ENST00000473036 TCHHL1Q5QJ38 904 aaPredicted RBP12.38□□□□□ -0.43
TPM3-216ENST00000473036 LIPJQ5W064 366 aa12.38□□□□□ -0.43
TPM3-216ENST00000473036 MED27Q6P2C8 311 aa12.38□□□□□ -0.43
TPM3-216ENST00000473036 ABHD17CQ6PCB6 329 aa12.38□□□□□ -0.43
TPM3-216ENST00000473036 KIRREL2Q6UWL6 708 aa12.38□□□□□ -0.43
TPM3-216ENST00000473036 CA13Q8N1Q1 262 aa12.38□□□□□ -0.43
TPM3-216ENST00000473036 FAM26EQ8N5C1 309 aa12.38□□□□□ -0.43
TPM3-216ENST00000473036 TBC1D19Q8N5T2 526 aa12.38□□□□□ -0.43
TPM3-216ENST00000473036 OR4F6Q8NGB9 312 aa12.38□□□□□ -0.43
TPM3-216ENST00000473036 TRPC4APQ8TEL6 797 aa12.38□□□□□ -0.43
TPM3-216ENST00000473036 MIEF2Q96C03 454 aa12.38□□□□□ -0.43
TPM3-216ENST00000473036 C8orf44Q96CB5 159 aa12.38□□□□□ -0.43
TPM3-216ENST00000473036 L3HYPDHQ96EM0 354 aa12.38□□□□□ -0.43
TPM3-216ENST00000473036 SEC16BQ96JE7 1060 aa12.38□□□□□ -0.43
TPM3-216ENST00000473036 YIPF2Q9BWQ6 316 aa12.38□□□□□ -0.43
TPM3-216ENST00000473036 SORBS1Q9BX66 1292 aaKnown RBP12.38□□□□□ -0.43
TPM3-216ENST00000473036 ZNF717Q9BY31 904 aaPredicted RBP12.38□□□□□ -0.43
TPM3-216ENST00000473036 RBCK1Q9BYM8 510 aa12.38□□□□□ -0.43
TPM3-216ENST00000473036 EPN3Q9H201 632 aa12.38□□□□□ -0.43
TPM3-216ENST00000473036 ACTR8Q9H981 624 aa12.38□□□□□ -0.43
TPM3-216ENST00000473036 TNFRSF12AQ9NP84 129 aa12.38□□□□□ -0.43
TPM3-216ENST00000473036 KCNK9Q9NPC2 374 aa12.38□□□□□ -0.43
TPM3-216ENST00000473036 MKKSQ9NPJ1 570 aaPredicted RBP12.38□□□□□ -0.43
TPM3-216ENST00000473036 POLHQ9Y253 713 aa12.38□□□□□ -0.43
TPM3-216ENST00000473036 PADI2Q9Y2J8 665 aa12.38□□□□□ -0.43
TPM3-216ENST00000473036 PLLPQ9Y342 182 aa12.38□□□□□ -0.43
TPM3-216ENST00000473036 TSC22D4Q9Y3Q8 395 aa12.38□□□□□ -0.43
TPM3-216ENST00000473036 ANGPTL3Q9Y5C1 460 aa12.38□□□□□ -0.43
TPM3-216ENST00000473036 NOTCH2Q04721 2471 aa12.38□□□□□ -0.43
TPM3-216ENST00000473036 SPTAN1Q13813 2472 aaKnown RBP12.38□□□□□ -0.43
TPM3-216ENST00000473036 ANKDD1BA6NHY2 528 aa12.37□□□□□ -0.43
TPM3-216ENST00000473036 MAGEB17A8MXT2 336 aa12.37□□□□□ -0.43
TPM3-216ENST00000473036 FAM227AF5H4B4 570 aa12.37□□□□□ -0.43
TPM3-216ENST00000473036 SAP18O00422 153 aaKnown RBP12.37□□□□□ -0.43
TPM3-216ENST00000473036 ERI3O43414 337 aaKnown RBP12.37□□□□□ -0.43
TPM3-216ENST00000473036 CHST10O43529 356 aa12.37□□□□□ -0.43
TPM3-216ENST00000473036 TYROBPO43914 113 aa12.37□□□□□ -0.43
TPM3-216ENST00000473036 UGDHO60701 494 aa12.37□□□□□ -0.43
TPM3-216ENST00000473036 CLDN9O95484 217 aa12.37□□□□□ -0.43
TPM3-216ENST00000473036 PDGFAP04085 211 aa12.37□□□□□ -0.43
TPM3-216ENST00000473036 MMP11P24347 488 aa12.37□□□□□ -0.43
TPM3-216ENST00000473036 XCR1P46094 333 aa12.37□□□□□ -0.43
TPM3-216ENST00000473036 CCNG1P51959 295 aa12.37□□□□□ -0.43
TPM3-216ENST00000473036 HNRNPFP52597 415 aaKnown RBP12.37□□□□□ -0.43
TPM3-216ENST00000473036 PLA2G16P53816 162 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms