RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 PANX2Q96RD6 677 aa8.69□□□□□ -1.02
VCL-204ENST00000472585 GPR21Q99679 349 aa8.69□□□□□ -1.02
VCL-204ENST00000472585 EBNA1BP2Q99848 306 aaKnown RBP8.69□□□□□ -1.02
VCL-204ENST00000472585 DESI2Q9BSY9 194 aa8.69□□□□□ -1.02
VCL-204ENST00000472585 ATG10Q9H0Y0 220 aa8.69□□□□□ -1.02
VCL-204ENST00000472585 KLHL31Q9H511 634 aa8.69□□□□□ -1.02
VCL-204ENST00000472585 LIN28AQ9H9Z2 209 aaKnown RBP8.69□□□□□ -1.02
VCL-204ENST00000472585 NEUROD4Q9HD90 331 aa8.69□□□□□ -1.02
VCL-204ENST00000472585 NECTIN3Q9NQS3 549 aa8.69□□□□□ -1.02
VCL-204ENST00000472585 EIF2B3Q9NR50 452 aaKnown RBP8.69□□□□□ -1.02
VCL-204ENST00000472585 FBXO6Q9NRD1 293 aaPredicted RBP8.69□□□□□ -1.02
VCL-204ENST00000472585 FAM114A2Q9NRY5 505 aa8.69□□□□□ -1.02
VCL-204ENST00000472585 UTP6Q9NYH9 597 aaKnown RBP8.69□□□□□ -1.02
VCL-204ENST00000472585 BFARQ9NZS9 450 aa8.69□□□□□ -1.02
VCL-204ENST00000472585 PDE10AQ9Y233 779 aa8.69□□□□□ -1.02
VCL-204ENST00000472585 L3MBTL1Q9Y468 752 aa8.69□□□□□ -1.02
VCL-204ENST00000472585 FBN1P35555 2871 aaKnown RBP8.69□□□□□ -1.02
VCL-204ENST00000472585 A0A0G2JMM0 328 aa8.68□□□□□ -1.02
VCL-204ENST00000472585 ZCWPW2A0A1B0GU75 182 aa8.68□□□□□ -1.02
VCL-204ENST00000472585 A0A1W2PPB8 328 aa8.68□□□□□ -1.02
VCL-204ENST00000472585 A0A1W2PRS3 328 aa8.68□□□□□ -1.02
VCL-204ENST00000472585 TCRBV16S1A1N1A0A5B0 115 aa8.68□□□□□ -1.02
VCL-204ENST00000472585 KIR3DP1A8MWS1 328 aa8.68□□□□□ -1.02
VCL-204ENST00000472585 E5RI56 91 aa8.68□□□□□ -1.02
VCL-204ENST00000472585 H3BMM5 538 aa8.68□□□□□ -1.02
VCL-204ENST00000472585 ZBTB14O43829 449 aa8.68□□□□□ -1.02
VCL-204ENST00000472585 HAUS5O94927 633 aa8.68□□□□□ -1.02
VCL-204ENST00000472585 LY6G6DO95868 133 aa8.68□□□□□ -1.02
VCL-204ENST00000472585 SMIM10L1P0DMW3 83 aa8.68□□□□□ -1.02
VCL-204ENST00000472585 OGNP20774 298 aaKnown RBP8.68□□□□□ -1.02
VCL-204ENST00000472585 ADH7P40394 386 aa8.68□□□□□ -1.02
VCL-204ENST00000472585 NAE1Q13564 534 aa8.68□□□□□ -1.02
VCL-204ENST00000472585 PHKG1Q16816 387 aa8.68□□□□□ -1.02
VCL-204ENST00000472585 MEI1Q5TIA1 1274 aa8.68□□□□□ -1.02
VCL-204ENST00000472585 ANKRD22Q5VYY1 191 aa8.68□□□□□ -1.02
VCL-204ENST00000472585 KIAA0930Q6ICG6 404 aaPredicted RBP8.68□□□□□ -1.02
VCL-204ENST00000472585 ARHGAP11AQ6P4F7 1023 aa8.68□□□□□ -1.02
VCL-204ENST00000472585 PAOXQ6QHF9 649 aa8.68□□□□□ -1.02
VCL-204ENST00000472585 AGTRAPQ6RW13 159 aa8.68□□□□□ -1.02
VCL-204ENST00000472585 PAMR1Q6UXH9 720 aa8.68□□□□□ -1.02
VCL-204ENST00000472585 UBE2R2Q712K3 238 aaPredicted RBP8.68□□□□□ -1.02
VCL-204ENST00000472585 CAMKVQ8NCB2 501 aa8.68□□□□□ -1.02
VCL-204ENST00000472585 OR4K1Q8NGD4 311 aa8.68□□□□□ -1.02
VCL-204ENST00000472585 OR5M9Q8NGP3 310 aa8.68□□□□□ -1.02
VCL-204ENST00000472585 MCOLN3Q8TDD5 553 aa8.68□□□□□ -1.02
VCL-204ENST00000472585 EEF1AKMT1Q8WVE0 214 aa8.68□□□□□ -1.02
VCL-204ENST00000472585 SMIM10Q96HG1 83 aa8.68□□□□□ -1.02
VCL-204ENST00000472585 OR4K3Q96R72 315 aa8.68□□□□□ -1.02
VCL-204ENST00000472585 SARGQ9BW04 601 aa8.68□□□□□ -1.02
VCL-204ENST00000472585 SGPP1Q9BX95 441 aa8.68□□□□□ -1.02
VCL-204ENST00000472585 TRIM5Q9C035 493 aa8.68□□□□□ -1.02
VCL-204ENST00000472585 TSPY26PQ9H489 355 aa8.68□□□□□ -1.02
VCL-204ENST00000472585 CCDC177Q9NQR7 707 aaPredicted RBP8.68□□□□□ -1.02
VCL-204ENST00000472585 PNPLA3Q9NST1 481 aa8.68□□□□□ -1.02
VCL-204ENST00000472585 KLHL42Q9P2K6 505 aa8.68□□□□□ -1.02
VCL-204ENST00000472585 DRG1Q9Y295 367 aaKnown RBP8.68□□□□□ -1.02
VCL-204ENST00000472585 FAM215AQ9Y5M1 114 aa8.68□□□□□ -1.02
VCL-204ENST00000472585 LIPGQ9Y5X9 500 aa8.68□□□□□ -1.02
VCL-204ENST00000472585 SAGE2PA6NJ88 616 aa8.67□□□□□ -1.02
VCL-204ENST00000472585 ZNF839A8K0R7 811 aa8.67□□□□□ -1.02
VCL-204ENST00000472585 NPIPA2E9PIF3 369 aa8.67□□□□□ -1.02
VCL-204ENST00000472585 NPIPA3F8WFD2 350 aa8.67□□□□□ -1.02
VCL-204ENST00000472585 KLRC4-KLRK1H3BQV0 150 aa8.67□□□□□ -1.02
VCL-204ENST00000472585 CDK2AP1O14519 115 aa8.67□□□□□ -1.02
VCL-204ENST00000472585 SLC16A5O15375 505 aa8.67□□□□□ -1.02
VCL-204ENST00000472585 ZNF354AO60765 605 aaPredicted RBP8.67□□□□□ -1.02
VCL-204ENST00000472585 ZNF888P0CJ79 500 aaPredicted RBP8.67□□□□□ -1.02
VCL-204ENST00000472585 GLI4P10075 376 aa8.67□□□□□ -1.02
VCL-204ENST00000472585 ALOX12P18054 663 aa8.67□□□□□ -1.02
VCL-204ENST00000472585 HRH2P25021 359 aa8.67□□□□□ -1.02
VCL-204ENST00000472585 GABRB3P28472 473 aa8.67□□□□□ -1.02
VCL-204ENST00000472585 PPP2R1BP30154 601 aa8.67□□□□□ -1.02
VCL-204ENST00000472585 HOXC12P31275 282 aa8.67□□□□□ -1.02
VCL-204ENST00000472585 PEX19P40855 299 aa8.67□□□□□ -1.02
VCL-204ENST00000472585 ZFP36L2P47974 494 aaKnown RBP8.67□□□□□ -1.02
VCL-204ENST00000472585 BASP1P80723 227 aaKnown RBP8.67□□□□□ -1.02
VCL-204ENST00000472585 CCNG2Q16589 344 aa8.67□□□□□ -1.02
VCL-204ENST00000472585 CATSPEREQ5SY80 951 aa8.67□□□□□ -1.02
VCL-204ENST00000472585 RNF187Q5TA31 235 aaPredicted RBP8.67□□□□□ -1.02
VCL-204ENST00000472585 KIAA0408Q6ZU52 694 aa8.67□□□□□ -1.02
VCL-204ENST00000472585 CHSY3Q70JA7 882 aa8.67□□□□□ -1.02
VCL-204ENST00000472585 CCDC89Q8N998 374 aa8.67□□□□□ -1.02
VCL-204ENST00000472585 ANKRD53Q8N9V6 530 aa8.67□□□□□ -1.02
VCL-204ENST00000472585 TMEM52Q8NDY8 209 aa8.67□□□□□ -1.02
VCL-204ENST00000472585 ABHD11Q8NFV4 315 aa8.67□□□□□ -1.02
VCL-204ENST00000472585 UTP15Q8TED0 518 aaKnown RBP8.67□□□□□ -1.02
VCL-204ENST00000472585 SREK1Q8WXA9 508 aaKnown RBP8.67□□□□□ -1.02
VCL-204ENST00000472585 KCNJ9Q92806 393 aa8.67□□□□□ -1.02
VCL-204ENST00000472585 ALKBH8Q96BT7 664 aaKnown RBP8.67□□□□□ -1.02
VCL-204ENST00000472585 PYCR2Q96C36 320 aa8.67□□□□□ -1.02
VCL-204ENST00000472585 FRMD8P1Q9BZ68 369 aaPredicted RBP8.67□□□□□ -1.02
VCL-204ENST00000472585 KCMF1Q9P0J7 381 aa8.67□□□□□ -1.02
VCL-204ENST00000472585 ZFATQ9P243 1243 aa8.67□□□□□ -1.02
VCL-204ENST00000472585 KLF13Q9Y2Y9 288 aaPredicted RBP8.67□□□□□ -1.02
VCL-204ENST00000472585 A0A0G2JNJ9 132 aa8.66□□□□□ -1.02
VCL-204ENST00000472585 MYOCOSA0A1B0GUC4 107 aa8.66□□□□□ -1.02
VCL-204ENST00000472585 FAM187AA6NFU0 413 aa8.66□□□□□ -1.02
VCL-204ENST00000472585 A6NNC1 897 aa8.66□□□□□ -1.02
VCL-204ENST00000472585 G3V3Y1 287 aa8.66□□□□□ -1.02
VCL-204ENST00000472585 NDUFS4O43181 175 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms