RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 GK5Q6ZS86 529 aa17.64■□□□□ 0.41
SORT1-203ENST00000471996 CNGA4Q8IV77 575 aa17.64■□□□□ 0.41
SORT1-203ENST00000471996 PRELID2Q8N945 189 aa17.64■□□□□ 0.41
SORT1-203ENST00000471996 ARMC2Q8NEN0 867 aa17.64■□□□□ 0.41
SORT1-203ENST00000471996 VMP1Q96GC9 406 aa17.64■□□□□ 0.41
SORT1-203ENST00000471996 CNPPD1Q9BV87 410 aa17.64■□□□□ 0.41
SORT1-203ENST00000471996 IL22Q9GZX6 179 aa17.64■□□□□ 0.41
SORT1-203ENST00000471996 IL1RL2Q9HB29 575 aa17.64■□□□□ 0.41
SORT1-203ENST00000471996 ZFATQ9P243 1243 aa17.64■□□□□ 0.41
SORT1-203ENST00000471996 KLHL42Q9P2K6 505 aa17.64■□□□□ 0.41
SORT1-203ENST00000471996 PPIEQ9UNP9 301 aaKnown RBP17.64■□□□□ 0.41
SORT1-203ENST00000471996 FBN1P35555 2871 aaKnown RBP17.63■□□□□ 0.41
SORT1-203ENST00000471996 COL6A5A8TX70 2615 aa17.63■□□□□ 0.41
SORT1-203ENST00000471996 TCRBV7S2A1N4TA0A589 114 aa17.63■□□□□ 0.41
SORT1-203ENST00000471996 SYCE3A1L190 88 aa17.63■□□□□ 0.41
SORT1-203ENST00000471996 G3V3Y1 287 aa17.63■□□□□ 0.41
SORT1-203ENST00000471996 OR6B1O95007 311 aa17.63■□□□□ 0.41
SORT1-203ENST00000471996 IFNB1P01574 187 aa17.63■□□□□ 0.41
SORT1-203ENST00000471996 CD53P19397 219 aa17.63■□□□□ 0.41
SORT1-203ENST00000471996 TACR1P25103 407 aa17.63■□□□□ 0.41
SORT1-203ENST00000471996 CUL1Q13616 776 aa17.63■□□□□ 0.41
SORT1-203ENST00000471996 XKR6Q5GH73 641 aa17.63■□□□□ 0.41
SORT1-203ENST00000471996 C16orf47Q6ZP98 133 aaPredicted RBP17.63■□□□□ 0.41
SORT1-203ENST00000471996 GIMAP7Q8NHV1 300 aa17.63■□□□□ 0.41
SORT1-203ENST00000471996 ASB15Q8WXK1 588 aa17.63■□□□□ 0.41
SORT1-203ENST00000471996 MFSD3Q96ES6 412 aa17.63■□□□□ 0.41
SORT1-203ENST00000471996 FAM173AQ9BQD7 235 aa17.63■□□□□ 0.41
SORT1-203ENST00000471996 CLK4Q9HAZ1 481 aaKnown RBP17.63■□□□□ 0.41
SORT1-203ENST00000471996 FOXD3Q9UJU5 478 aaPredicted RBP17.63■□□□□ 0.41
SORT1-203ENST00000471996 PRKNO60260 465 aaPredicted RBP17.62■□□□□ 0.41
SORT1-203ENST00000471996 CEP104O60308 925 aa17.62■□□□□ 0.41
SORT1-203ENST00000471996 OR2J2O76002 312 aa17.62■□□□□ 0.41
SORT1-203ENST00000471996 ZFAND5O76080 213 aa17.62■□□□□ 0.41
SORT1-203ENST00000471996 CELA3AP09093 270 aa17.62■□□□□ 0.41
SORT1-203ENST00000471996 CDH1P12830 882 aa17.62■□□□□ 0.41
SORT1-203ENST00000471996 ENO3P13929 434 aaPredicted RBP17.62■□□□□ 0.41
SORT1-203ENST00000471996 CNR1P21554 472 aa17.62■□□□□ 0.41
SORT1-203ENST00000471996 BMP5P22003 454 aa17.62■□□□□ 0.41
SORT1-203ENST00000471996 GPR143P51810 404 aa17.62■□□□□ 0.41
SORT1-203ENST00000471996 SLC10A1Q14973 349 aa17.62■□□□□ 0.41
SORT1-203ENST00000471996 SPA17Q15506 151 aa17.62■□□□□ 0.41
SORT1-203ENST00000471996 CES3Q6UWW8 571 aa17.62■□□□□ 0.41
SORT1-203ENST00000471996 UBE2R2Q712K3 238 aaPredicted RBP17.62■□□□□ 0.41
SORT1-203ENST00000471996 SLC13A5Q86YT5 568 aaPredicted RBP17.62■□□□□ 0.41
SORT1-203ENST00000471996 SPNS2Q8IVW8 549 aa17.62■□□□□ 0.41
SORT1-203ENST00000471996 ATG4AQ8WYN0 398 aa17.62■□□□□ 0.41
SORT1-203ENST00000471996 NCLNQ969V3 563 aa17.62■□□□□ 0.41
SORT1-203ENST00000471996 CCDC77Q9BR77 488 aa17.62■□□□□ 0.41
SORT1-203ENST00000471996 LDAHQ9H6V9 325 aa17.62■□□□□ 0.41
SORT1-203ENST00000471996 ATP6AP2A0A1C7CYW4 349 aa17.61■□□□□ 0.41
SORT1-203ENST00000471996 TUBAL3A6NHL2 446 aa17.61■□□□□ 0.41
SORT1-203ENST00000471996 AKR1B15C9JRZ8 316 aaPredicted RBP17.61■□□□□ 0.41
SORT1-203ENST00000471996 PSMD12O00232 456 aaPredicted RBP17.61■□□□□ 0.41
SORT1-203ENST00000471996 DVL2O14641 736 aa17.61■□□□□ 0.41
SORT1-203ENST00000471996 ARHGEF9O43307 516 aa17.61■□□□□ 0.41
SORT1-203ENST00000471996 HCN1O60741 890 aa17.61■□□□□ 0.41
SORT1-203ENST00000471996 ATP6AP2O75787 350 aa17.61■□□□□ 0.41
SORT1-203ENST00000471996 ZNF888P0CJ79 500 aaPredicted RBP17.61■□□□□ 0.41
SORT1-203ENST00000471996 RNH1P13489 461 aaKnown RBP17.61■□□□□ 0.41
SORT1-203ENST00000471996 ETS1P14921 441 aa17.61■□□□□ 0.41
SORT1-203ENST00000471996 OGNP20774 298 aaKnown RBP17.61■□□□□ 0.41
SORT1-203ENST00000471996 NPY2RP49146 381 aa17.61■□□□□ 0.41
SORT1-203ENST00000471996 NAP1L1P55209 391 aaKnown RBP17.61■□□□□ 0.41
SORT1-203ENST00000471996 OASLQ15646 514 aaKnown RBP17.61■□□□□ 0.41
SORT1-203ENST00000471996 HYAL4Q2M3T9 481 aa17.61■□□□□ 0.41
SORT1-203ENST00000471996 SEM1Q6ZVN7 128 aa17.61■□□□□ 0.41
SORT1-203ENST00000471996 CENPUQ71F23 418 aa17.61■□□□□ 0.41
SORT1-203ENST00000471996 ABHD13Q7L211 337 aa17.61■□□□□ 0.41
SORT1-203ENST00000471996 PRUNE1Q86TP1 453 aa17.61■□□□□ 0.41
SORT1-203ENST00000471996 CIARTQ8N365 385 aaPredicted RBP17.61■□□□□ 0.41
SORT1-203ENST00000471996 KIFC1Q9BW19 673 aa17.61■□□□□ 0.41
SORT1-203ENST00000471996 LIN28AQ9H9Z2 209 aaKnown RBP17.61■□□□□ 0.41
SORT1-203ENST00000471996 BFARQ9NZS9 450 aa17.61■□□□□ 0.41
SORT1-203ENST00000471996 MYOTQ9UBF9 498 aa17.61■□□□□ 0.41
SORT1-203ENST00000471996 MED16Q9Y2X0 877 aa17.61■□□□□ 0.41
SORT1-203ENST00000471996 RTTNQ86VV8 2226 aa17.6■□□□□ 0.41
SORT1-203ENST00000471996 OR1F1O43749 312 aa17.6■□□□□ 0.41
SORT1-203ENST00000471996 GOSR1O95249 250 aa17.6■□□□□ 0.41
SORT1-203ENST00000471996 SERPIND1P05546 499 aa17.6■□□□□ 0.41
SORT1-203ENST00000471996 ENDOUP21128 410 aaKnown RBP17.6■□□□□ 0.41
SORT1-203ENST00000471996 SOX3P41225 446 aa17.6■□□□□ 0.41
SORT1-203ENST00000471996 RGS1Q08116 209 aa17.6■□□□□ 0.41
SORT1-203ENST00000471996 FOXO1Q12778 655 aa17.6■□□□□ 0.41
SORT1-203ENST00000471996 ZNF750Q32MQ0 723 aa17.6■□□□□ 0.41
SORT1-203ENST00000471996 LCTLQ6UWM7 567 aa17.6■□□□□ 0.41
SORT1-203ENST00000471996 CXorf67Q86X51 503 aaPredicted RBP17.6■□□□□ 0.41
SORT1-203ENST00000471996 LRRC57Q8N9N7 239 aa17.6■□□□□ 0.41
SORT1-203ENST00000471996 SIMC1Q8NDZ2 872 aa17.6■□□□□ 0.41
SORT1-203ENST00000471996 ABHD11Q8NFV4 315 aa17.6■□□□□ 0.41
SORT1-203ENST00000471996 NT5CQ8TCD5 201 aa17.6■□□□□ 0.41
SORT1-203ENST00000471996 UTP15Q8TED0 518 aaKnown RBP17.6■□□□□ 0.41
SORT1-203ENST00000471996 PDLIM2Q96JY6 352 aa17.6■□□□□ 0.41
SORT1-203ENST00000471996 RASL10BQ96S79 203 aa17.6■□□□□ 0.41
SORT1-203ENST00000471996 AARSD1Q9BTE6 412 aaKnown RBP17.6■□□□□ 0.41
SORT1-203ENST00000471996 PNO1Q9NRX1 252 aaKnown RBP17.6■□□□□ 0.41
SORT1-203ENST00000471996 SAMD15Q9P1V8 674 aa17.6■□□□□ 0.41
SORT1-203ENST00000471996 SPRR3Q9UBC9 169 aa17.6■□□□□ 0.41
SORT1-203ENST00000471996 MTRF1LQ9UGC7 380 aaKnown RBP17.6■□□□□ 0.41
SORT1-203ENST00000471996 ADAM21Q9UKJ8 722 aa17.6■□□□□ 0.41
SORT1-203ENST00000471996 VPS9D1Q9Y2B5 631 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms