RNA–Protein interactions for RNA: ENST00000470944.1

SOD1-203, Transcript of superoxide dismutase 1, humanhuman

TSL 2

Gene SOD1, Length 1,746 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-203ENST00000470944 EBPLQ9BY08 206 aa27.38■■□□□ 1.97
SOD1-203ENST00000470944 DLGAP4Q9Y2H0 992 aa27.38■■□□□ 1.97
SOD1-203ENST00000470944 TMEM184BQ9Y519 407 aaPredicted RBP27.38■■□□□ 1.97
SOD1-203ENST00000470944 SGK494L7N484 410 aa27.38■■□□□ 1.97
SOD1-203ENST00000470944 GALR3O60755 368 aaPredicted RBP27.38■■□□□ 1.97
SOD1-203ENST00000470944 VPS4BO75351 444 aa27.38■■□□□ 1.97
SOD1-203ENST00000470944 HIST1H1TP22492 207 aaPredicted RBP27.38■■□□□ 1.97
SOD1-203ENST00000470944 ATP5A1P25705 553 aaKnown RBP27.38■■□□□ 1.97
SOD1-203ENST00000470944 ARFIP2P53365 341 aa27.38■■□□□ 1.97
SOD1-203ENST00000470944 RAB15P59190 212 aa27.38■■□□□ 1.97
SOD1-203ENST00000470944 FAM53BQ14153 422 aa27.38■■□□□ 1.97
SOD1-203ENST00000470944 C1orf189Q5VU69 101 aa27.38■■□□□ 1.97
SOD1-203ENST00000470944 SRFBP1Q8NEF9 429 aaKnown RBP27.38■■□□□ 1.97
SOD1-203ENST00000470944 TAAR9Q96RI9 348 aa27.38■■□□□ 1.97
SOD1-203ENST00000470944 AHSPQ9NZD4 102 aa27.38■■□□□ 1.97
SOD1-203ENST00000470944 PCDHB3Q9Y5E6 796 aa27.38■■□□□ 1.97
SOD1-203ENST00000470944 SPTBN4Q9H254 2564 aa27.37■■□□□ 1.97
SOD1-203ENST00000470944 C9orf172C9J069 976 aa27.37■■□□□ 1.97
SOD1-203ENST00000470944 ATXN8OSP0DMR3 200 aa27.37■■□□□ 1.97
SOD1-203ENST00000470944 TPP2P29144 1249 aaPredicted RBP27.37■■□□□ 1.97
SOD1-203ENST00000470944 OLR1P78380 273 aa27.37■■□□□ 1.97
SOD1-203ENST00000470944 CBX1P83916 185 aa27.37■■□□□ 1.97
SOD1-203ENST00000470944 TGM3Q08188 693 aa27.37■■□□□ 1.97
SOD1-203ENST00000470944 RHBDD2Q6NTF9 364 aa27.37■■□□□ 1.97
SOD1-203ENST00000470944 CEACAM20Q6UY09 585 aa27.37■■□□□ 1.97
SOD1-203ENST00000470944 ACAD11Q709F0 780 aa27.37■■□□□ 1.97
SOD1-203ENST00000470944 PIGWQ7Z7B1 504 aa27.37■■□□□ 1.97
SOD1-203ENST00000470944 ACOT4Q8N9L9 421 aa27.37■■□□□ 1.97
SOD1-203ENST00000470944 CEP70Q8NHQ1 597 aa27.37■■□□□ 1.97
SOD1-203ENST00000470944 DDX31Q9H8H2 851 aaKnown RBP27.37■■□□□ 1.97
SOD1-203ENST00000470944 ANKHQ9HCJ1 492 aa27.37■■□□□ 1.97
SOD1-203ENST00000470944 NDOR1Q9UHB4 597 aa27.37■■□□□ 1.97
SOD1-203ENST00000470944 E9PBE3 544 aa27.36■■□□□ 1.97
SOD1-203ENST00000470944 KLHL41O60662 606 aa27.36■■□□□ 1.97
SOD1-203ENST00000470944 FAM107AO95990 144 aa27.36■■□□□ 1.97
SOD1-203ENST00000470944 ALDOCP09972 364 aaKnown RBP27.36■■□□□ 1.97
SOD1-203ENST00000470944 LBPP18428 481 aa27.36■■□□□ 1.97
SOD1-203ENST00000470944 ARSFP54793 590 aa27.36■■□□□ 1.97
SOD1-203ENST00000470944 NOXRED1Q6NXP6 359 aa27.36■■□□□ 1.97
SOD1-203ENST00000470944 GALNT18Q6P9A2 607 aa27.36■■□□□ 1.97
SOD1-203ENST00000470944 NUDT13Q86X67 352 aa27.36■■□□□ 1.97
SOD1-203ENST00000470944 OR5T3Q8NGG3 340 aa27.36■■□□□ 1.97
SOD1-203ENST00000470944 MARK4Q96L34 752 aa27.36■■□□□ 1.97
SOD1-203ENST00000470944 FCRL1Q96LA6 429 aa27.36■■□□□ 1.97
SOD1-203ENST00000470944 RILPQ96NA2 401 aa27.36■■□□□ 1.97
SOD1-203ENST00000470944 DDA1Q9BW61 102 aa27.36■■□□□ 1.97
SOD1-203ENST00000470944 SRPK3Q9UPE1 567 aa27.36■■□□□ 1.97
SOD1-203ENST00000470944 TMPRSS11DO60235 418 aa27.36■■□□□ 1.97
SOD1-203ENST00000470944 TNFSF15O95150 251 aa27.36■■□□□ 1.97
SOD1-203ENST00000470944 ITGAXP20702 1163 aa27.36■■□□□ 1.97
SOD1-203ENST00000470944 TIA1P31483 386 aaKnown RBP eCLIP27.36■■□□□ 1.971e-7■■□□□ 12.5
SOD1-203ENST00000470944 ARFIP1P53367 373 aa27.36■■□□□ 1.97
SOD1-203ENST00000470944 DIO3P55073 304 aa27.36■■□□□ 1.97
SOD1-203ENST00000470944 FOXC1Q12948 553 aa27.36■■□□□ 1.97
SOD1-203ENST00000470944 YOD1Q5VVQ6 348 aaPredicted RBP27.36■■□□□ 1.97
SOD1-203ENST00000470944 ZDHHC19Q8WVZ1 309 aaPredicted RBP27.36■■□□□ 1.97
SOD1-203ENST00000470944 ULBP3Q9BZM4 244 aa27.36■■□□□ 1.97
SOD1-203ENST00000470944 SLC7A5P2Q9GIP4 190 aa27.36■■□□□ 1.97
SOD1-203ENST00000470944 SIRT5Q9NXA8 310 aa27.36■■□□□ 1.97
SOD1-203ENST00000470944 FOXJ2Q9P0K8 574 aa27.36■■□□□ 1.97
SOD1-203ENST00000470944 MAU2Q9Y6X3 613 aa27.36■■□□□ 1.97
SOD1-203ENST00000470944 A0A0A6YYD5 115 aa27.35■■□□□ 1.97
SOD1-203ENST00000470944 A0A1B0GX78 115 aa27.35■■□□□ 1.97
SOD1-203ENST00000470944 DSCR3O14972 297 aa27.35■■□□□ 1.97
SOD1-203ENST00000470944 PCDH7O60245 1069 aa27.35■■□□□ 1.97
SOD1-203ENST00000470944 RDH16O75452 317 aa27.35■■□□□ 1.97
SOD1-203ENST00000470944 KIAA0754O94854 1291 aa27.35■■□□□ 1.97
SOD1-203ENST00000470944 TACR1P25103 407 aa27.35■■□□□ 1.97
SOD1-203ENST00000470944 OR1D4P47884 311 aa27.35■■□□□ 1.97
SOD1-203ENST00000470944 MTTPP55157 894 aa27.35■■□□□ 1.97
SOD1-203ENST00000470944 ERVK-8P63133 956 aa27.35■■□□□ 1.97
SOD1-203ENST00000470944 GABREP78334 506 aa27.35■■□□□ 1.97
SOD1-203ENST00000470944 EMX2Q04743 252 aa27.35■■□□□ 1.97
SOD1-203ENST00000470944 OGFOD2Q6N063 350 aa27.35■■□□□ 1.97
SOD1-203ENST00000470944 CLIP3Q96DZ5 547 aa27.35■■□□□ 1.97
SOD1-203ENST00000470944 METTL2AQ96IZ6 378 aaKnown RBP27.35■■□□□ 1.97
SOD1-203ENST00000470944 CCDC28BQ9BUN5 200 aa27.35■■□□□ 1.97
SOD1-203ENST00000470944 COPS7BQ9H9Q2 264 aaPredicted RBP27.35■■□□□ 1.97
SOD1-203ENST00000470944 POLR1BQ9H9Y6 1135 aa27.35■■□□□ 1.97
SOD1-203ENST00000470944 TXLNGQ9NUQ3 528 aa27.35■■□□□ 1.97
SOD1-203ENST00000470944 G3BP2Q9UN86 482 aaKnown RBP27.35■■□□□ 1.97
SOD1-203ENST00000470944 PCDHGA8Q9Y5G5 932 aa27.35■■□□□ 1.97
SOD1-203ENST00000470944 SCN3AQ9NY46 2000 aa27.35■■□□□ 1.97
SOD1-203ENST00000470944 SCELO95171 688 aa27.34■■□□□ 1.97
SOD1-203ENST00000470944 NSA2O95478 260 aaKnown RBP27.34■■□□□ 1.97
SOD1-203ENST00000470944 CCNYL2Q5T2Q4 361 aa27.34■■□□□ 1.97
SOD1-203ENST00000470944 IL23RQ5VWK5 629 aa27.34■■□□□ 1.97
SOD1-203ENST00000470944 STON2Q8WXE9 905 aa27.34■■□□□ 1.97
SOD1-203ENST00000470944 MMABQ96EY8 250 aaPredicted RBP27.34■■□□□ 1.97
SOD1-203ENST00000470944 GBP5Q96PP8 586 aa27.34■■□□□ 1.97
SOD1-203ENST00000470944 SERINC2Q96SA4 455 aa27.34■■□□□ 1.97
SOD1-203ENST00000470944 ASPSCR1Q9BZE9 553 aa27.34■■□□□ 1.97
SOD1-203ENST00000470944 TMED5Q9Y3A6 229 aa27.34■■□□□ 1.97
SOD1-203ENST00000470944 PCDHGA3Q9Y5H0 932 aa27.34■■□□□ 1.97
SOD1-203ENST00000470944 SPTBN2O15020 2390 aa27.34■■□□□ 1.97
SOD1-203ENST00000470944 BCKDHAP12694 445 aa27.33■■□□□ 1.97
SOD1-203ENST00000470944 TSFMP43897 325 aaKnown RBP27.33■■□□□ 1.97
SOD1-203ENST00000470944 MAT1AQ00266 395 aaKnown RBP27.33■■□□□ 1.97
SOD1-203ENST00000470944 SLAMF1Q13291 335 aa27.33■■□□□ 1.97
SOD1-203ENST00000470944 CAMK2BQ13554 666 aa27.33■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms