RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 PSME2Q9UL46 239 aa9.29□□□□□ -0.92
CCM2-204ENST00000470837 NDUFAF1Q9Y375 327 aa9.29□□□□□ -0.92
CCM2-204ENST00000470837 SLC22A7Q9Y694 548 aa9.29□□□□□ -0.92
CCM2-204ENST00000470837 IGHV5-10-1A0A0J9YXX1 117 aa9.28□□□□□ -0.92
CCM2-204ENST00000470837 A0A1W2PQM1 296 aa9.28□□□□□ -0.92
CCM2-204ENST00000470837 HYKKA2RU49 373 aa9.28□□□□□ -0.92
CCM2-204ENST00000470837 B2RBV5 119 aa9.28□□□□□ -0.92
CCM2-204ENST00000470837 D6RAR5 112 aa9.28□□□□□ -0.92
CCM2-204ENST00000470837 MRASO14807 208 aa9.28□□□□□ -0.92
CCM2-204ENST00000470837 AIM2O14862 343 aa9.28□□□□□ -0.92
CCM2-204ENST00000470837 GYG2O15488 501 aa9.28□□□□□ -0.92
CCM2-204ENST00000470837 EEDO75530 441 aaKnown RBP9.28□□□□□ -0.92
CCM2-204ENST00000470837 RFPL3O75679 317 aa9.28□□□□□ -0.92
CCM2-204ENST00000470837 FAM58BPP0C7Q3 252 aa9.28□□□□□ -0.92
CCM2-204ENST00000470837 ATP5A1P25705 553 aaKnown RBP9.28□□□□□ -0.92
CCM2-204ENST00000470837 BSGP35613 385 aa9.28□□□□□ -0.92
CCM2-204ENST00000470837 KIR3DL1P43629 444 aa9.28□□□□□ -0.92
CCM2-204ENST00000470837 CPA2P48052 419 aa9.28□□□□□ -0.92
CCM2-204ENST00000470837 NUDT2P50583 147 aa9.28□□□□□ -0.92
CCM2-204ENST00000470837 ARSFP54793 590 aa9.28□□□□□ -0.92
CCM2-204ENST00000470837 ITGA1P56199 1179 aa9.28□□□□□ -0.92
CCM2-204ENST00000470837 RAE1P78406 368 aaKnown RBP9.28□□□□□ -0.92
CCM2-204ENST00000470837 CFHR1Q03591 330 aa9.28□□□□□ -0.92
CCM2-204ENST00000470837 ACTN3Q08043 901 aaPredicted RBP9.28□□□□□ -0.92
CCM2-204ENST00000470837 FOXM1Q08050 763 aa9.28□□□□□ -0.92
CCM2-204ENST00000470837 LRRC74AQ0VAA2 488 aa9.28□□□□□ -0.92
CCM2-204ENST00000470837 RCAN2Q14206 197 aa9.28□□□□□ -0.92
CCM2-204ENST00000470837 KCNAB1Q14722 419 aa9.28□□□□□ -0.92
CCM2-204ENST00000470837 FAM174BQ3ZCQ3 159 aa9.28□□□□□ -0.92
CCM2-204ENST00000470837 VPS26BQ4G0F5 336 aa9.28□□□□□ -0.92
CCM2-204ENST00000470837 DNAL1Q4LDG9 190 aa9.28□□□□□ -0.92
CCM2-204ENST00000470837 DEFB134Q4QY38 66 aa9.28□□□□□ -0.92
CCM2-204ENST00000470837 TIGD2Q4W5G0 525 aa9.28□□□□□ -0.92
CCM2-204ENST00000470837 LACTB2Q53H82 288 aaPredicted RBP9.28□□□□□ -0.92
CCM2-204ENST00000470837 STPG1Q5TH74 334 aa9.28□□□□□ -0.92
CCM2-204ENST00000470837 ANXA8L1Q5VT79 327 aa9.28□□□□□ -0.92
CCM2-204ENST00000470837 YOD1Q5VVQ6 348 aaPredicted RBP9.28□□□□□ -0.92
CCM2-204ENST00000470837 TMEM214Q6NUQ4 689 aaKnown RBP9.28□□□□□ -0.92
CCM2-204ENST00000470837 BLOC1S3Q6QNY0 202 aa9.28□□□□□ -0.92
CCM2-204ENST00000470837 C16orf89Q6UX73 402 aa9.28□□□□□ -0.92
CCM2-204ENST00000470837 RBM44Q6ZP01 1051 aaKnown RBP9.28□□□□□ -0.92
CCM2-204ENST00000470837 GPR180Q86V85 440 aa9.28□□□□□ -0.92
CCM2-204ENST00000470837 ZCCHC7Q8N3Z6 543 aaKnown RBP9.28□□□□□ -0.92
CCM2-204ENST00000470837 NATD1Q8N6N6 113 aa9.28□□□□□ -0.92
CCM2-204ENST00000470837 EFCAB3Q8N7B9 438 aa9.28□□□□□ -0.92
CCM2-204ENST00000470837 ACOT4Q8N9L9 421 aa9.28□□□□□ -0.92
CCM2-204ENST00000470837 AGBL5Q8NDL9 886 aa9.28□□□□□ -0.92
CCM2-204ENST00000470837 OR9I1Q8NGQ6 314 aa9.28□□□□□ -0.92
CCM2-204ENST00000470837 OR8K5Q8NH50 307 aa9.28□□□□□ -0.92
CCM2-204ENST00000470837 PROKR1Q8TCW9 393 aa9.28□□□□□ -0.92
CCM2-204ENST00000470837 UTP15Q8TED0 518 aaKnown RBP9.28□□□□□ -0.92
CCM2-204ENST00000470837 GFM2Q969S9 779 aaKnown RBP9.28□□□□□ -0.92
CCM2-204ENST00000470837 MCUR1Q96AQ8 359 aa9.28□□□□□ -0.92
CCM2-204ENST00000470837 TESCQ96BS2 214 aa9.28□□□□□ -0.92
CCM2-204ENST00000470837 PPCDCQ96CD2 204 aa9.28□□□□□ -0.92
CCM2-204ENST00000470837 KLHL29Q96CT2 875 aa9.28□□□□□ -0.92
CCM2-204ENST00000470837 MTERF3Q96E29 417 aa9.28□□□□□ -0.92
CCM2-204ENST00000470837 OR52E6Q96RD3 313 aa9.28□□□□□ -0.92
CCM2-204ENST00000470837 RTKNQ9BST9 563 aa9.28□□□□□ -0.92
CCM2-204ENST00000470837 SORBS1Q9BX66 1292 aaKnown RBP9.28□□□□□ -0.92
CCM2-204ENST00000470837 KLHL31Q9H511 634 aa9.28□□□□□ -0.92
CCM2-204ENST00000470837 REEP4Q9H6H4 257 aa9.28□□□□□ -0.92
CCM2-204ENST00000470837 FGF21Q9NSA1 209 aa9.28□□□□□ -0.92
CCM2-204ENST00000470837 RXFP3Q9NSD7 469 aa9.28□□□□□ -0.92
CCM2-204ENST00000470837 STARD5Q9NSY2 213 aa9.28□□□□□ -0.92
CCM2-204ENST00000470837 GIMAP4Q9NUV9 329 aa9.28□□□□□ -0.92
CCM2-204ENST00000470837 MS4A12Q9NXJ0 267 aa9.28□□□□□ -0.92
CCM2-204ENST00000470837 SEMA5BQ9P283 1151 aa9.28□□□□□ -0.92
CCM2-204ENST00000470837 PDP2Q9P2J9 529 aa9.28□□□□□ -0.92
CCM2-204ENST00000470837 NDOR1Q9UHB4 597 aa9.28□□□□□ -0.92
CCM2-204ENST00000470837 RARRES3Q9UL19 164 aa9.28□□□□□ -0.92
CCM2-204ENST00000470837 PCDHGB4Q9UN71 923 aa9.28□□□□□ -0.92
CCM2-204ENST00000470837 CDC14AQ9UNH5 594 aa9.28□□□□□ -0.92
CCM2-204ENST00000470837 ARHGEF17Q96PE2 2063 aaPredicted RBP9.28□□□□□ -0.92
CCM2-204ENST00000470837 PCDH15Q96QU1 1955 aa9.27□□□□□ -0.93
CCM2-204ENST00000470837 A0A0A6YYD5 115 aa9.27□□□□□ -0.93
CCM2-204ENST00000470837 A0A1W2PP18 115 aa9.27□□□□□ -0.93
CCM2-204ENST00000470837 NTN3O00634 580 aaPredicted RBP9.27□□□□□ -0.93
CCM2-204ENST00000470837 SCAMP2O15127 329 aaKnown RBP9.27□□□□□ -0.93
CCM2-204ENST00000470837 NVLO15381 856 aaKnown RBP9.27□□□□□ -0.93
CCM2-204ENST00000470837 P2RX6O15547 441 aa9.27□□□□□ -0.93
CCM2-204ENST00000470837 KLHL18O94889 574 aa9.27□□□□□ -0.93
CCM2-204ENST00000470837 ANP32DO95626 131 aa9.27□□□□□ -0.93
CCM2-204ENST00000470837 PGRP06401 933 aa9.27□□□□□ -0.93
CCM2-204ENST00000470837 IL3P08700 152 aa9.27□□□□□ -0.93
CCM2-204ENST00000470837 MSL3P1P0C860 447 aa9.27□□□□□ -0.93
CCM2-204ENST00000470837 DRD2P14416 443 aa9.27□□□□□ -0.93
CCM2-204ENST00000470837 DDCP20711 480 aa9.27□□□□□ -0.93
CCM2-204ENST00000470837 ALAS2P22557 587 aa9.27□□□□□ -0.93
CCM2-204ENST00000470837 CPN2P22792 545 aa9.27□□□□□ -0.93
CCM2-204ENST00000470837 TACR1P25103 407 aa9.27□□□□□ -0.93
CCM2-204ENST00000470837 CERS1P27544 350 aa9.27□□□□□ -0.93
CCM2-204ENST00000470837 PTPN4P29074 926 aa9.27□□□□□ -0.93
CCM2-204ENST00000470837 TPP2P29144 1249 aaPredicted RBP9.27□□□□□ -0.93
CCM2-204ENST00000470837 EMP3P54852 163 aa9.27□□□□□ -0.93
CCM2-204ENST00000470837 KLC1Q07866 573 aa9.27□□□□□ -0.93
CCM2-204ENST00000470837 HYAL2Q12891 473 aa9.27□□□□□ -0.93
CCM2-204ENST00000470837 NFYCQ13952 458 aa9.27□□□□□ -0.93
CCM2-204ENST00000470837 FAM53BQ14153 422 aa9.27□□□□□ -0.93
CCM2-204ENST00000470837 GPR19Q15760 415 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms