RNA–Protein interactions for RNA: ENST00000470737.1

SEMA3F-208, Transcript of semaphorin 3F, humanhuman

TSL 5

Gene SEMA3F, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-208ENST00000470737 AIF1LQ9BQI0 150 aa12.96□□□□□ -0.33
SEMA3F-208ENST00000470737 CCDC77Q9BR77 488 aa12.96□□□□□ -0.33
SEMA3F-208ENST00000470737 KCNJ16Q9NPI9 418 aa12.96□□□□□ -0.33
SEMA3F-208ENST00000470737 TIMMDC1Q9NPL8 285 aa12.96□□□□□ -0.33
SEMA3F-208ENST00000470737 ERVK-11Q9UQG0 969 aa12.96□□□□□ -0.33
SEMA3F-208ENST00000470737 PHF3Q92576 2039 aaKnown RBP12.95□□□□□ -0.34
SEMA3F-208ENST00000470737 DNAJB6O75190 326 aa12.95□□□□□ -0.34
SEMA3F-208ENST00000470737 MYO1DO94832 1006 aa12.95□□□□□ -0.34
SEMA3F-208ENST00000470737 GUCA1CO95843 209 aa12.95□□□□□ -0.34
SEMA3F-208ENST00000470737 TUBB4AP04350 444 aa12.95□□□□□ -0.34
SEMA3F-208ENST00000470737 PGAM1P18669 254 aa12.95□□□□□ -0.34
SEMA3F-208ENST00000470737 RAB8AP61006 207 aa12.95□□□□□ -0.34
SEMA3F-208ENST00000470737 HYAL2Q12891 473 aa12.95□□□□□ -0.34
SEMA3F-208ENST00000470737 CATSPEREQ5SY80 951 aa12.95□□□□□ -0.34
SEMA3F-208ENST00000470737 TMEM200AQ86VY9 491 aa12.95□□□□□ -0.34
SEMA3F-208ENST00000470737 B3GNT7Q8NFL0 401 aa12.95□□□□□ -0.34
SEMA3F-208ENST00000470737 C16orf52Q8NHV5 167 aa12.95□□□□□ -0.34
SEMA3F-208ENST00000470737 UTP15Q8TED0 518 aaKnown RBP12.95□□□□□ -0.34
SEMA3F-208ENST00000470737 FBXL8Q96CD0 374 aa12.95□□□□□ -0.34
SEMA3F-208ENST00000470737 FAR2Q96K12 515 aa12.95□□□□□ -0.34
SEMA3F-208ENST00000470737 SIGLEC10Q96LC7 697 aa12.95□□□□□ -0.34
SEMA3F-208ENST00000470737 ZNF559Q9BR84 538 aa12.95□□□□□ -0.34
SEMA3F-208ENST00000470737 PELI2Q9HAT8 420 aa12.95□□□□□ -0.34
SEMA3F-208ENST00000470737 SLC24A3Q9HC58 644 aa12.95□□□□□ -0.34
SEMA3F-208ENST00000470737 ZFATQ9P243 1243 aa12.95□□□□□ -0.34
SEMA3F-208ENST00000470737 RNF6Q9Y252 685 aa12.95□□□□□ -0.34
SEMA3F-208ENST00000470737 MMACHCQ9Y4U1 282 aa12.95□□□□□ -0.34
SEMA3F-208ENST00000470737 DNAJC13O75165 2243 aa12.94□□□□□ -0.34
SEMA3F-208ENST00000470737 NKX2-6A6NCS4 301 aa12.94□□□□□ -0.34
SEMA3F-208ENST00000470737 ACOT7O00154 380 aa12.94□□□□□ -0.34
SEMA3F-208ENST00000470737 ITGA10O75578 1167 aa12.94□□□□□ -0.34
SEMA3F-208ENST00000470737 PDE9AO76083 593 aa12.94□□□□□ -0.34
SEMA3F-208ENST00000470737 TTC4O95801 387 aa12.94□□□□□ -0.34
SEMA3F-208ENST00000470737 ENO2P09104 434 aaPredicted RBP12.94□□□□□ -0.34
SEMA3F-208ENST00000470737 MAGEA3P43357 314 aa12.94□□□□□ -0.34
SEMA3F-208ENST00000470737 SSR4P51571 173 aa12.94□□□□□ -0.34
SEMA3F-208ENST00000470737 ART1P52961 327 aa12.94□□□□□ -0.34
SEMA3F-208ENST00000470737 GPR85P60893 370 aa12.94□□□□□ -0.34
SEMA3F-208ENST00000470737 REEP5Q00765 189 aa12.94□□□□□ -0.34
SEMA3F-208ENST00000470737 PLGLB1Q02325 96 aa12.94□□□□□ -0.34
SEMA3F-208ENST00000470737 CRYMQ14894 314 aa12.94□□□□□ -0.34
SEMA3F-208ENST00000470737 RBBP5Q15291 538 aaKnown RBP12.94□□□□□ -0.34
SEMA3F-208ENST00000470737 TERF2Q15554 542 aa12.94□□□□□ -0.34
SEMA3F-208ENST00000470737 CMPK2Q5EBM0 449 aa12.94□□□□□ -0.34
SEMA3F-208ENST00000470737 RBM20Q5T481 1227 aaKnown RBP12.94□□□□□ -0.34
SEMA3F-208ENST00000470737 HECTD2Q5U5R9 776 aa12.94□□□□□ -0.34
SEMA3F-208ENST00000470737 CES4AQ5XG92 561 aa12.94□□□□□ -0.34
SEMA3F-208ENST00000470737 ACAD11Q709F0 780 aa12.94□□□□□ -0.34
SEMA3F-208ENST00000470737 TMPRSS11BQ86T26 416 aa12.94□□□□□ -0.34
SEMA3F-208ENST00000470737 ARMC10Q8N2F6 343 aa12.94□□□□□ -0.34
SEMA3F-208ENST00000470737 NAT8LQ8N9F0 302 aa12.94□□□□□ -0.34
SEMA3F-208ENST00000470737 ZFP62Q8NB50 900 aaPredicted RBP12.94□□□□□ -0.34
SEMA3F-208ENST00000470737 NFAM1Q8NET5 270 aaPredicted RBP12.94□□□□□ -0.34
SEMA3F-208ENST00000470737 LILRB4Q8NHJ6 448 aa12.94□□□□□ -0.34
SEMA3F-208ENST00000470737 NEIL2Q969S2 332 aa12.94□□□□□ -0.34
SEMA3F-208ENST00000470737 VMP1Q96GC9 406 aa12.94□□□□□ -0.34
SEMA3F-208ENST00000470737 TSNARE1Q96NA8 513 aa12.94□□□□□ -0.34
SEMA3F-208ENST00000470737 OR4K3Q96R72 315 aa12.94□□□□□ -0.34
SEMA3F-208ENST00000470737 NECTIN3Q9NQS3 549 aa12.94□□□□□ -0.34
SEMA3F-208ENST00000470737 PNO1Q9NRX1 252 aaKnown RBP12.94□□□□□ -0.34
SEMA3F-208ENST00000470737 ZNF407Q9C0G0 2248 aa12.94□□□□□ -0.34
SEMA3F-208ENST00000470737 IGKV3D-11A0A0A0MRZ8 115 aa12.93□□□□□ -0.34
SEMA3F-208ENST00000470737 A8MVJ9 347 aa12.93□□□□□ -0.34
SEMA3F-208ENST00000470737 MSX1P28360 303 aa12.93□□□□□ -0.34
SEMA3F-208ENST00000470737 CDKN2DP55273 166 aa12.93□□□□□ -0.34
SEMA3F-208ENST00000470737 STXBP1P61764 594 aaKnown RBP12.93□□□□□ -0.34
SEMA3F-208ENST00000470737 TIAL1Q01085 375 aaKnown RBP eCLIP12.93□□□□□ -0.34
SEMA3F-208ENST00000470737 MYBPHQ13203 477 aa12.93□□□□□ -0.34
SEMA3F-208ENST00000470737 PPP1R7Q15435 360 aa12.93□□□□□ -0.34
SEMA3F-208ENST00000470737 TOR1AIP1Q5JTV8 583 aa12.93□□□□□ -0.34
SEMA3F-208ENST00000470737 SPANXN3Q5MJ09 141 aa12.93□□□□□ -0.34
SEMA3F-208ENST00000470737 KIAA0408Q6ZU52 694 aa12.93□□□□□ -0.34
SEMA3F-208ENST00000470737 PPIL6Q8IXY8 311 aa12.93□□□□□ -0.34
SEMA3F-208ENST00000470737 CLYBLQ8N0X4 340 aa12.93□□□□□ -0.34
SEMA3F-208ENST00000470737 CA13Q8N1Q1 262 aa12.93□□□□□ -0.34
SEMA3F-208ENST00000470737 MARVELD2Q8N4S9 558 aa12.93□□□□□ -0.34
SEMA3F-208ENST00000470737 APCDD1LQ8NCL9 501 aa12.93□□□□□ -0.34
SEMA3F-208ENST00000470737 OR5M3Q8NGP4 307 aa12.93□□□□□ -0.34
SEMA3F-208ENST00000470737 NCLNQ969V3 563 aa12.93□□□□□ -0.34
SEMA3F-208ENST00000470737 UCK2Q9BZX2 261 aa12.93□□□□□ -0.34
SEMA3F-208ENST00000470737 SLC6A16Q9GZN6 736 aa12.93□□□□□ -0.34
SEMA3F-208ENST00000470737 DDX47Q9H0S4 455 aaKnown RBP12.93□□□□□ -0.34
SEMA3F-208ENST00000470737 DEFB127Q9H1M4 99 aa12.93□□□□□ -0.34
SEMA3F-208ENST00000470737 SPNS1Q9H2V7 528 aa12.93□□□□□ -0.34
SEMA3F-208ENST00000470737 PPANQ9NQ55 473 aaKnown RBP12.93□□□□□ -0.34
SEMA3F-208ENST00000470737 PRTFDC1Q9NRG1 225 aa12.93□□□□□ -0.34
SEMA3F-208ENST00000470737 HPF1Q9NWY4 346 aa12.93□□□□□ -0.34
SEMA3F-208ENST00000470737 KCMF1Q9P0J7 381 aa12.93□□□□□ -0.34
SEMA3F-208ENST00000470737 MRPS33Q9Y291 106 aaKnown RBP12.93□□□□□ -0.34
SEMA3F-208ENST00000470737 YARS2Q9Y2Z4 477 aaKnown RBP12.93□□□□□ -0.34
SEMA3F-208ENST00000470737 SPG11Q96JI7 2443 aa12.93□□□□□ -0.34
SEMA3F-208ENST00000470737 MTORP42345 2549 aa12.93□□□□□ -0.34
SEMA3F-208ENST00000470737 A0A088AWK7 358 aa12.92□□□□□ -0.34
SEMA3F-208ENST00000470737 SYNDIG1LA6NDD5 238 aa12.92□□□□□ -0.34
SEMA3F-208ENST00000470737 CLDN4O14493 209 aa12.92□□□□□ -0.34
SEMA3F-208ENST00000470737 DNALI1O14645 258 aaPredicted RBP12.92□□□□□ -0.34
SEMA3F-208ENST00000470737 ZFAND5O76080 213 aa12.92□□□□□ -0.34
SEMA3F-208ENST00000470737 ZWINTO95229 277 aa12.92□□□□□ -0.34
SEMA3F-208ENST00000470737 SERPINA6P08185 405 aa12.92□□□□□ -0.34
SEMA3F-208ENST00000470737 IGFBP2P18065 325 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms