RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 SLC7A1P30825 629 aa17.27■□□□□ 0.36
SMC4-211ENST00000469858 AFF3P51826 1226 aaKnown RBP17.27■□□□□ 0.36
SMC4-211ENST00000469858 PPP1CAP62136 330 aa17.27■□□□□ 0.36
SMC4-211ENST00000469858 TRIP10Q15642 601 aa17.27■□□□□ 0.36
SMC4-211ENST00000469858 LRRC36Q1X8D7 754 aa17.27■□□□□ 0.36
SMC4-211ENST00000469858 PRSS53Q2L4Q9 553 aa17.27■□□□□ 0.36
SMC4-211ENST00000469858 TRIM40Q6P9F5 258 aa17.27■□□□□ 0.36
SMC4-211ENST00000469858 MAMSTRQ6ZN01 415 aa17.27■□□□□ 0.36
SMC4-211ENST00000469858 VN1R4Q7Z5H5 301 aa17.27■□□□□ 0.36
SMC4-211ENST00000469858 OR2L5Q8NG80 312 aa17.27■□□□□ 0.36
SMC4-211ENST00000469858 NECAB3Q96P71 396 aaPredicted RBP17.27■□□□□ 0.36
SMC4-211ENST00000469858 KCNC2Q96PR1 638 aa17.27■□□□□ 0.36
SMC4-211ENST00000469858 SLC6A16Q9GZN6 736 aa17.27■□□□□ 0.36
SMC4-211ENST00000469858 RPF2Q9H7B2 306 aaKnown RBP17.27■□□□□ 0.36
SMC4-211ENST00000469858 TEX10Q9NXF1 929 aaPredicted RBP17.27■□□□□ 0.36
SMC4-211ENST00000469858 AURKCQ9UQB9 309 aa17.27■□□□□ 0.36
SMC4-211ENST00000469858 A0A0J9YVX5 310 aa17.26■□□□□ 0.35
SMC4-211ENST00000469858 DHRS12A0PJE2 317 aa17.26■□□□□ 0.35
SMC4-211ENST00000469858 ELOVL7A1L3X0 281 aa17.26■□□□□ 0.35
SMC4-211ENST00000469858 OR5K3A6NET4 321 aa17.26■□□□□ 0.35
SMC4-211ENST00000469858 GSTA4O15217 222 aa17.26■□□□□ 0.35
SMC4-211ENST00000469858 C6orf47O95873 294 aa17.26■□□□□ 0.35
SMC4-211ENST00000469858 GGT1P19440 569 aa17.26■□□□□ 0.35
SMC4-211ENST00000469858 PEX2P28328 305 aa17.26■□□□□ 0.35
SMC4-211ENST00000469858 LSSP48449 732 aa17.26■□□□□ 0.35
SMC4-211ENST00000469858 SIGLEC14Q08ET2 396 aa17.26■□□□□ 0.35
SMC4-211ENST00000469858 LRRC74AQ0VAA2 488 aa17.26■□□□□ 0.35
SMC4-211ENST00000469858 HEPACAMQ14CZ8 416 aa17.26■□□□□ 0.35
SMC4-211ENST00000469858 CYP51A1Q16850 503 aa17.26■□□□□ 0.35
SMC4-211ENST00000469858 SLC5A12Q1EHB4 618 aa17.26■□□□□ 0.35
SMC4-211ENST00000469858 DEFB133Q30KQ1 61 aa17.26■□□□□ 0.35
SMC4-211ENST00000469858 LPCAT4Q643R3 524 aa17.26■□□□□ 0.35
SMC4-211ENST00000469858 FAM180BQ6P0A1 224 aa17.26■□□□□ 0.35
SMC4-211ENST00000469858 FBXO42Q6P3S6 717 aa17.26■□□□□ 0.35
SMC4-211ENST00000469858 ABHD17CQ6PCB6 329 aa17.26■□□□□ 0.35
SMC4-211ENST00000469858 ASPGQ86U10 573 aa17.26■□□□□ 0.35
SMC4-211ENST00000469858 LILRA2Q8N149 483 aa17.26■□□□□ 0.35
SMC4-211ENST00000469858 ARL14Q8N4G2 192 aa17.26■□□□□ 0.35
SMC4-211ENST00000469858 TNIP2Q8NFZ5 429 aa17.26■□□□□ 0.35
SMC4-211ENST00000469858 OR8K5Q8NH50 307 aa17.26■□□□□ 0.35
SMC4-211ENST00000469858 PNPT1Q8TCS8 783 aaKnown RBP17.26■□□□□ 0.35
SMC4-211ENST00000469858 FIG4Q92562 907 aa17.26■□□□□ 0.35
SMC4-211ENST00000469858 DUS3LQ96G46 650 aaKnown RBP17.26■□□□□ 0.35
SMC4-211ENST00000469858 NSMCE2Q96MF7 247 aa17.26■□□□□ 0.35
SMC4-211ENST00000469858 PKP2Q99959 881 aa17.26■□□□□ 0.35
SMC4-211ENST00000469858 ABCG4Q9H172 646 aa17.26■□□□□ 0.35
SMC4-211ENST00000469858 RIMS3Q9UJD0 308 aa17.26■□□□□ 0.35
SMC4-211ENST00000469858 PCDHGB4Q9UN71 923 aa17.26■□□□□ 0.35
SMC4-211ENST00000469858 WBP11Q9Y2W2 641 aaKnown RBP17.26■□□□□ 0.35
SMC4-211ENST00000469858 TMEM131Q92545 1883 aa17.26■□□□□ 0.35
SMC4-211ENST00000469858 SCN3AQ9NY46 2000 aa17.26■□□□□ 0.35
SMC4-211ENST00000469858 A0A0J9YY10 115 aa17.26■□□□□ 0.35
SMC4-211ENST00000469858 FAM220BPB1ANY3 271 aa17.26■□□□□ 0.35
SMC4-211ENST00000469858 GPR37L1O60883 481 aa17.26■□□□□ 0.35
SMC4-211ENST00000469858 GMNNO75496 209 aa17.26■□□□□ 0.35
SMC4-211ENST00000469858 PSMA4P25789 261 aaKnown RBP17.26■□□□□ 0.35
SMC4-211ENST00000469858 RAB8AP61006 207 aa17.26■□□□□ 0.35
SMC4-211ENST00000469858 STXBP1P61764 594 aaKnown RBP17.26■□□□□ 0.35
SMC4-211ENST00000469858 HBA1P69905 142 aa17.26■□□□□ 0.35
SMC4-211ENST00000469858 GAB1Q13480 694 aa17.26■□□□□ 0.35
SMC4-211ENST00000469858 BIRC2Q13490 618 aa17.26■□□□□ 0.35
SMC4-211ENST00000469858 ARMC6Q6NXE6 501 aa17.26■□□□□ 0.35
SMC4-211ENST00000469858 ZNF438Q7Z4V0 828 aa17.26■□□□□ 0.35
SMC4-211ENST00000469858 CALHM3Q86XJ0 350 aa17.26■□□□□ 0.35
SMC4-211ENST00000469858 CLEC4FQ8N1N0 589 aa17.26■□□□□ 0.35
SMC4-211ENST00000469858 FAM110BQ8TC76 370 aa17.26■□□□□ 0.35
SMC4-211ENST00000469858 EFHD1Q9BUP0 239 aa17.26■□□□□ 0.35
SMC4-211ENST00000469858 C5AR2Q9P296 337 aa17.26■□□□□ 0.35
SMC4-211ENST00000469858 ANKMY1Q9P2S6 941 aa17.26■□□□□ 0.35
SMC4-211ENST00000469858 VPS4AQ9UN37 437 aa17.26■□□□□ 0.35
SMC4-211ENST00000469858 TCRBV5S2A0A599 114 aa17.25■□□□□ 0.35
SMC4-211ENST00000469858 PRAMEF10O60809 474 aa17.25■□□□□ 0.35
SMC4-211ENST00000469858 SLC35G6P0C7Q6 338 aa17.25■□□□□ 0.35
SMC4-211ENST00000469858 HIST1H1TP22492 207 aaPredicted RBP17.25■□□□□ 0.35
SMC4-211ENST00000469858 GSTM5P46439 218 aa17.25■□□□□ 0.35
SMC4-211ENST00000469858 FASLGP48023 281 aa17.25■□□□□ 0.35
SMC4-211ENST00000469858 RGS1Q08116 209 aa17.25■□□□□ 0.35
SMC4-211ENST00000469858 ABHD18Q0P651 414 aa17.25■□□□□ 0.35
SMC4-211ENST00000469858 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.25■□□□□ 0.35
SMC4-211ENST00000469858 MICU2Q8IYU8 434 aa17.25■□□□□ 0.35
SMC4-211ENST00000469858 FAM47BQ8NA70 645 aa17.25■□□□□ 0.35
SMC4-211ENST00000469858 KCT2Q8NC54 265 aa17.25■□□□□ 0.35
SMC4-211ENST00000469858 OR2A5Q96R48 311 aa17.25■□□□□ 0.35
SMC4-211ENST00000469858 TPT1P8Q9HAU6 139 aa17.25■□□□□ 0.35
SMC4-211ENST00000469858 PRDM7Q9NQW5 492 aa17.25■□□□□ 0.35
SMC4-211ENST00000469858 UCKL1Q9NWZ5 548 aa17.25■□□□□ 0.35
SMC4-211ENST00000469858 ZNF282Q9UDV7 671 aaPredicted RBP17.25■□□□□ 0.35
SMC4-211ENST00000469858 V9GYQ6 96 aa17.25■□□□□ 0.35
SMC4-211ENST00000469858 CCDC163A0A0D9SF12 145 aa17.24■□□□□ 0.35
SMC4-211ENST00000469858 C1orf226A1L170 272 aa17.24■□□□□ 0.35
SMC4-211ENST00000469858 LMO7DNF2Z398 122 aa17.24■□□□□ 0.35
SMC4-211ENST00000469858 CASQ2O14958 399 aaPredicted RBP17.24■□□□□ 0.35
SMC4-211ENST00000469858 NOBOXO60393 691 aa17.24■□□□□ 0.35
SMC4-211ENST00000469858 ANXA6P08133 673 aa17.24■□□□□ 0.35
SMC4-211ENST00000469858 FAM58BPP0C7Q3 252 aa17.24■□□□□ 0.35
SMC4-211ENST00000469858 ZCCHC18P0CG32 403 aa17.24■□□□□ 0.35
SMC4-211ENST00000469858 CERS1P27544 350 aa17.24■□□□□ 0.35
SMC4-211ENST00000469858 HOXA6P31267 233 aa17.24■□□□□ 0.35
SMC4-211ENST00000469858 GZMMP51124 257 aa17.24■□□□□ 0.35
SMC4-211ENST00000469858 POLE2P56282 527 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms