RNA–Protein interactions for RNA: ENST00000469802.5

COL9A3-208, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-208ENST00000469802 TAS2R50P59544 299 aa15.27■□□□□ 0.04
COL9A3-208ENST00000469802 ATP6V0D1P61421 351 aa15.27■□□□□ 0.04
COL9A3-208ENST00000469802 FJX1Q86VR8 437 aa15.27■□□□□ 0.04
COL9A3-208ENST00000469802 SCUBE1Q8IWY4 988 aa15.27■□□□□ 0.04
COL9A3-208ENST00000469802 QRFPRQ96P65 431 aa15.27■□□□□ 0.04
COL9A3-208ENST00000469802 NPLQ9BXD5 320 aaPredicted RBP15.27■□□□□ 0.04
COL9A3-208ENST00000469802 CAPS2Q9BXY5 557 aa15.27■□□□□ 0.04
COL9A3-208ENST00000469802 CNOT10Q9H9A5 744 aaKnown RBP15.27■□□□□ 0.04
COL9A3-208ENST00000469802 NECTIN3Q9NQS3 549 aa15.27■□□□□ 0.04
COL9A3-208ENST00000469802 DNAJC11Q9NVH1 559 aa15.27■□□□□ 0.04
COL9A3-208ENST00000469802 ANKRD10Q9NXR5 420 aa15.27■□□□□ 0.04
COL9A3-208ENST00000469802 WWOXQ9NZC7 414 aa15.27■□□□□ 0.04
COL9A3-208ENST00000469802 TXNDC16Q9P2K2 825 aa15.27■□□□□ 0.04
COL9A3-208ENST00000469802 SEC14L3Q9UDX4 400 aa15.27■□□□□ 0.04
COL9A3-208ENST00000469802 GTF3C1Q12789 2109 aa15.26■□□□□ 0.03
COL9A3-208ENST00000469802 FAM227AF5H4B4 570 aa15.26■□□□□ 0.03
COL9A3-208ENST00000469802 PSMD12O00232 456 aaPredicted RBP15.26■□□□□ 0.03
COL9A3-208ENST00000469802 ERI3O43414 337 aaKnown RBP15.26■□□□□ 0.03
COL9A3-208ENST00000469802 WISP2O76076 250 aa15.26■□□□□ 0.03
COL9A3-208ENST00000469802 EPORP19235 508 aa15.26■□□□□ 0.03
COL9A3-208ENST00000469802 CD22P20273 847 aa15.26■□□□□ 0.03
COL9A3-208ENST00000469802 RAB10P61026 200 aa15.26■□□□□ 0.03
COL9A3-208ENST00000469802 SRSF11Q05519 484 aaKnown RBP15.26■□□□□ 0.03
COL9A3-208ENST00000469802 E2F2Q14209 437 aa15.26■□□□□ 0.03
COL9A3-208ENST00000469802 TERF2Q15554 542 aa15.26■□□□□ 0.03
COL9A3-208ENST00000469802 ZNF468Q5VIY5 522 aaPredicted RBP15.26■□□□□ 0.03
COL9A3-208ENST00000469802 SPINK14Q6IE38 97 aa15.26■□□□□ 0.03
COL9A3-208ENST00000469802 SULT1C3Q6IMI6 304 aa15.26■□□□□ 0.03
COL9A3-208ENST00000469802 ADNP2Q6IQ32 1131 aa15.26■□□□□ 0.03
COL9A3-208ENST00000469802 ZDHHC24Q6UX98 284 aa15.26■□□□□ 0.03
COL9A3-208ENST00000469802 C3orf62Q6ZUJ4 267 aa15.26■□□□□ 0.03
COL9A3-208ENST00000469802 ZNF572Q7Z3I7 529 aaPredicted RBP15.26■□□□□ 0.03
COL9A3-208ENST00000469802 RPS19BP1Q86WX3 136 aaKnown RBP15.26■□□□□ 0.03
COL9A3-208ENST00000469802 GPSM1Q86YR5 675 aa15.26■□□□□ 0.03
COL9A3-208ENST00000469802 KRT78Q8N1N4 520 aa15.26■□□□□ 0.03
COL9A3-208ENST00000469802 FBXO25Q8TCJ0 367 aa15.26■□□□□ 0.03
COL9A3-208ENST00000469802 KIAA1191Q96A73 305 aa15.26■□□□□ 0.03
COL9A3-208ENST00000469802 FRMD6Q96NE9 622 aa15.26■□□□□ 0.03
COL9A3-208ENST00000469802 TRIM45Q9H8W5 580 aaPredicted RBP15.26■□□□□ 0.03
COL9A3-208ENST00000469802 PTBP2Q9UKA9 531 aaKnown RBP15.26■□□□□ 0.03
COL9A3-208ENST00000469802 PPIEQ9UNP9 301 aaKnown RBP15.26■□□□□ 0.03
COL9A3-208ENST00000469802 PCNX1Q96RV3 2341 aa15.25■□□□□ 0.03
COL9A3-208ENST00000469802 TGFBR3LH3BV60 316 aa15.25■□□□□ 0.03
COL9A3-208ENST00000469802 H2AFYO75367 372 aaKnown RBP15.25■□□□□ 0.03
COL9A3-208ENST00000469802 STK16O75716 305 aa15.25■□□□□ 0.03
COL9A3-208ENST00000469802 CD46P15529 392 aa15.25■□□□□ 0.03
COL9A3-208ENST00000469802 TPP2P29144 1249 aaPredicted RBP15.25■□□□□ 0.03
COL9A3-208ENST00000469802 TRHRP34981 398 aaPredicted RBP15.25■□□□□ 0.03
COL9A3-208ENST00000469802 CA7P43166 264 aa15.25■□□□□ 0.03
COL9A3-208ENST00000469802 HSPA7P48741 367 aa15.25■□□□□ 0.03
COL9A3-208ENST00000469802 ST13P50502 369 aaKnown RBP15.25■□□□□ 0.03
COL9A3-208ENST00000469802 RAB38P57729 211 aa15.25■□□□□ 0.03
COL9A3-208ENST00000469802 MLF1P58340 268 aa15.25■□□□□ 0.03
COL9A3-208ENST00000469802 ETF1P62495 437 aaKnown RBP15.25■□□□□ 0.03
COL9A3-208ENST00000469802 BTN3A2P78410 334 aa15.25■□□□□ 0.03
COL9A3-208ENST00000469802 CAV1Q03135 178 aa15.25■□□□□ 0.03
COL9A3-208ENST00000469802 RUNX2Q13950 521 aa15.25■□□□□ 0.03
COL9A3-208ENST00000469802 PDK4Q16654 411 aa15.25■□□□□ 0.03
COL9A3-208ENST00000469802 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.25■□□□□ 0.037e-6■■□□□ 14.4
COL9A3-208ENST00000469802 KBTBD12Q3ZCT8 623 aa15.25■□□□□ 0.03
COL9A3-208ENST00000469802 FBXO48Q5FWF7 155 aa15.25■□□□□ 0.03
COL9A3-208ENST00000469802 ZNF227Q86WZ6 799 aa15.25■□□□□ 0.03
COL9A3-208ENST00000469802 CYP4X1Q8N118 509 aa15.25■□□□□ 0.03
COL9A3-208ENST00000469802 TMEM178AQ8NBL3 297 aa15.25■□□□□ 0.03
COL9A3-208ENST00000469802 APCDD1LQ8NCL9 501 aa15.25■□□□□ 0.03
COL9A3-208ENST00000469802 OR2L5Q8NG80 312 aa15.25■□□□□ 0.03
COL9A3-208ENST00000469802 ADAMTS18Q8TE60 1221 aa15.25■□□□□ 0.03
COL9A3-208ENST00000469802 ESAMQ96AP7 390 aa15.25■□□□□ 0.03
COL9A3-208ENST00000469802 PTCD3Q96EY7 689 aaKnown RBP15.25■□□□□ 0.03
COL9A3-208ENST00000469802 RHBGQ9H310 441 aa15.25■□□□□ 0.03
COL9A3-208ENST00000469802 CDCP1Q9H5V8 836 aa15.25■□□□□ 0.03
COL9A3-208ENST00000469802 KLHL1Q9NR64 748 aa15.25■□□□□ 0.03
COL9A3-208ENST00000469802 ZNF490Q9ULM2 529 aaPredicted RBP15.25■□□□□ 0.03
COL9A3-208ENST00000469802 ASB1Q9Y576 335 aa15.25■□□□□ 0.03
COL9A3-208ENST00000469802 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.25■□□□□ 0.03
COL9A3-208ENST00000469802 A0A0G2JN53 185 aa15.24■□□□□ 0.03
COL9A3-208ENST00000469802 NME2P1O60361 137 aa15.24■□□□□ 0.03
COL9A3-208ENST00000469802 SLC35E2BP0CK96 405 aa15.24■□□□□ 0.03
COL9A3-208ENST00000469802 NME2P22392 152 aa15.24■□□□□ 0.03
COL9A3-208ENST00000469802 EEF1DP29692 281 aaKnown RBP15.24■□□□□ 0.03
COL9A3-208ENST00000469802 SPRP35270 261 aaPredicted RBP15.24■□□□□ 0.03
COL9A3-208ENST00000469802 GMPRP36959 345 aa15.24■□□□□ 0.03
COL9A3-208ENST00000469802 KCNC1P48547 511 aa15.24■□□□□ 0.03
COL9A3-208ENST00000469802 HNRNPFP52597 415 aaKnown RBP15.24■□□□□ 0.03
COL9A3-208ENST00000469802 PLTPP55058 493 aa15.24■□□□□ 0.03
COL9A3-208ENST00000469802 HSD17B7P56937 341 aa15.24■□□□□ 0.03
COL9A3-208ENST00000469802 GUCY2DQ02846 1103 aa15.24■□□□□ 0.03
COL9A3-208ENST00000469802 DLG1Q12959 904 aa15.24■□□□□ 0.03
COL9A3-208ENST00000469802 DOC2AQ14183 400 aa15.24■□□□□ 0.03
COL9A3-208ENST00000469802 TRADDQ15628 312 aa15.24■□□□□ 0.03
COL9A3-208ENST00000469802 GRTP1Q5TC63 336 aa15.24■□□□□ 0.03
COL9A3-208ENST00000469802 ABHD17CQ6PCB6 329 aa15.24■□□□□ 0.03
COL9A3-208ENST00000469802 SIAH3Q8IW03 269 aa15.24■□□□□ 0.03
COL9A3-208ENST00000469802 C17orf53Q8N3J3 647 aaPredicted RBP15.24■□□□□ 0.03
COL9A3-208ENST00000469802 HORMAD2Q8N7B1 307 aa15.24■□□□□ 0.03
COL9A3-208ENST00000469802 TMEM52Q8NDY8 209 aa15.24■□□□□ 0.03
COL9A3-208ENST00000469802 ARMC2Q8NEN0 867 aa15.24■□□□□ 0.03
COL9A3-208ENST00000469802 B3GNT7Q8NFL0 401 aa15.24■□□□□ 0.03
COL9A3-208ENST00000469802 THAP3Q8WTV1 239 aaPredicted RBP15.24■□□□□ 0.03
COL9A3-208ENST00000469802 UBTD2Q8WUN7 234 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms