RNA–Protein interactions for RNA: ENST00000469602.1

SRRT-208, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 376 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-208ENST00000469602 MYLK4Q86YV6 388 aaPredicted RBP9.17□□□□□ -0.94
SRRT-208ENST00000469602 HPS6Q86YV9 775 aa9.17□□□□□ -0.94
SRRT-208ENST00000469602 PARP9Q8IXQ6 854 aa9.17□□□□□ -0.94
SRRT-208ENST00000469602 KBTBD2Q8IY47 623 aa9.17□□□□□ -0.94
SRRT-208ENST00000469602 CA13Q8N1Q1 262 aa9.17□□□□□ -0.94
SRRT-208ENST00000469602 L3MBTL4Q8NA19 623 aa9.17□□□□□ -0.94
SRRT-208ENST00000469602 TEX19Q8NA77 164 aa9.17□□□□□ -0.94
SRRT-208ENST00000469602 EPS8L3Q8TE67 593 aaKnown RBP9.17□□□□□ -0.94
SRRT-208ENST00000469602 AENQ8WTP8 325 aaKnown RBP9.17□□□□□ -0.94
SRRT-208ENST00000469602 ZNF473Q8WTR7 871 aaKnown RBP9.17□□□□□ -0.94
SRRT-208ENST00000469602 REPS1Q96D71 796 aa9.17□□□□□ -0.94
SRRT-208ENST00000469602 KCNC2Q96PR1 638 aa9.17□□□□□ -0.94
SRRT-208ENST00000469602 F2RL3Q96RI0 385 aa9.17□□□□□ -0.94
SRRT-208ENST00000469602 NPLQ9BXD5 320 aaPredicted RBP9.17□□□□□ -0.94
SRRT-208ENST00000469602 LHPPQ9H008 270 aa9.17□□□□□ -0.94
SRRT-208ENST00000469602 ZNF700Q9H0M5 742 aa9.17□□□□□ -0.94
SRRT-208ENST00000469602 ZNF552Q9H707 407 aaPredicted RBP9.17□□□□□ -0.94
SRRT-208ENST00000469602 NOL11Q9H8H0 719 aaKnown RBP9.17□□□□□ -0.94
SRRT-208ENST00000469602 RIC8BQ9NVN3 520 aa9.17□□□□□ -0.94
SRRT-208ENST00000469602 TMEM216Q9P0N5 145 aa9.17□□□□□ -0.94
SRRT-208ENST00000469602 C5AR2Q9P296 337 aa9.17□□□□□ -0.94
SRRT-208ENST00000469602 C19orf25Q9UFG5 118 aaPredicted RBP9.17□□□□□ -0.94
SRRT-208ENST00000469602 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.17□□□□□ -0.94
SRRT-208ENST00000469602 ADGRE2Q9UHX3 823 aa9.17□□□□□ -0.94
SRRT-208ENST00000469602 PCTPQ9UKL6 214 aa9.17□□□□□ -0.94
SRRT-208ENST00000469602 TSC22D4Q9Y3Q8 395 aa9.17□□□□□ -0.94
SRRT-208ENST00000469602 PCDHGA11Q9Y5H2 935 aa9.17□□□□□ -0.94
SRRT-208ENST00000469602 V9GYY5 206 aaPredicted RBP9.17□□□□□ -0.94
SRRT-208ENST00000469602 RELNP78509 3460 aa9.16□□□□□ -0.94
SRRT-208ENST00000469602 A0A0G2JN53 185 aa9.16□□□□□ -0.94
SRRT-208ENST00000469602 A0A1W2PPM1 405 aa9.16□□□□□ -0.94
SRRT-208ENST00000469602 SMIM23A6NLE4 172 aa9.16□□□□□ -0.94
SRRT-208ENST00000469602 A8MT66 165 aa9.16□□□□□ -0.94
SRRT-208ENST00000469602 MAGEB17A8MXT2 336 aa9.16□□□□□ -0.94
SRRT-208ENST00000469602 H0YIV9 168 aa9.16□□□□□ -0.94
SRRT-208ENST00000469602 PSMD12O00232 456 aaPredicted RBP9.16□□□□□ -0.94
SRRT-208ENST00000469602 B3GALT2O43825 422 aa9.16□□□□□ -0.94
SRRT-208ENST00000469602 DPM1O60762 260 aa9.16□□□□□ -0.94
SRRT-208ENST00000469602 B4GALT2O60909 372 aa9.16□□□□□ -0.94
SRRT-208ENST00000469602 CDH16O75309 829 aa9.16□□□□□ -0.94
SRRT-208ENST00000469602 CLDN9O95484 217 aa9.16□□□□□ -0.94
SRRT-208ENST00000469602 SERPINA7P05543 415 aa9.16□□□□□ -0.94
SRRT-208ENST00000469602 RPS17P08708 135 aaKnown RBP9.16□□□□□ -0.94
SRRT-208ENST00000469602 NUDT17P0C025 328 aa9.16□□□□□ -0.94
SRRT-208ENST00000469602 PRR35P0CG20 571 aa9.16□□□□□ -0.94
SRRT-208ENST00000469602 KRT15P19012 456 aa9.16□□□□□ -0.94
SRRT-208ENST00000469602 TAC1P20366 129 aa9.16□□□□□ -0.94
SRRT-208ENST00000469602 CASRP41180 1078 aa9.16□□□□□ -0.94
SRRT-208ENST00000469602 PIK3CBP42338 1070 aa9.16□□□□□ -0.94
SRRT-208ENST00000469602 HERVK_113P63132 956 aa9.16□□□□□ -0.94
SRRT-208ENST00000469602 TGM3Q08188 693 aa9.16□□□□□ -0.94
SRRT-208ENST00000469602 NSDHLQ15738 373 aa9.16□□□□□ -0.94
SRRT-208ENST00000469602 CPSF6Q16630 551 aaKnown RBP eCLIP9.16□□□□□ -0.94
SRRT-208ENST00000469602 ERCC6LQ2NKX8 1250 aa9.16□□□□□ -0.94
SRRT-208ENST00000469602 AGAP7PQ5VUJ5 663 aa9.16□□□□□ -0.94
SRRT-208ENST00000469602 KHDRBS2Q5VWX1 349 aaKnown RBP9.16□□□□□ -0.94
SRRT-208ENST00000469602 IGFL3Q6UXB1 125 aa9.16□□□□□ -0.94
SRRT-208ENST00000469602 CHSY3Q70JA7 882 aa9.16□□□□□ -0.94
SRRT-208ENST00000469602 CPEB2Q7Z5Q1 589 aaKnown RBP9.16□□□□□ -0.94
SRRT-208ENST00000469602 ANKRD37Q7Z713 158 aa9.16□□□□□ -0.94
SRRT-208ENST00000469602 CYP4X1Q8N118 509 aa9.16□□□□□ -0.94
SRRT-208ENST00000469602 PLPP5Q8NEB5 264 aa9.16□□□□□ -0.94
SRRT-208ENST00000469602 SRFBP1Q8NEF9 429 aaKnown RBP9.16□□□□□ -0.94
SRRT-208ENST00000469602 OR52B6Q8NGF0 335 aa9.16□□□□□ -0.94
SRRT-208ENST00000469602 HUS1BQ8NHY5 278 aa9.16□□□□□ -0.94
SRRT-208ENST00000469602 CMTM7Q96FZ5 175 aa9.16□□□□□ -0.94
SRRT-208ENST00000469602 THOC3Q96J01 351 aaKnown RBP9.16□□□□□ -0.94
SRRT-208ENST00000469602 IMMP1LQ96LU5 166 aa9.16□□□□□ -0.94
SRRT-208ENST00000469602 NSUN5Q96P11 429 aaKnown RBP9.16□□□□□ -0.94
SRRT-208ENST00000469602 AGAP4Q96P64 663 aa9.16□□□□□ -0.94
SRRT-208ENST00000469602 QRFPRQ96P65 431 aa9.16□□□□□ -0.94
SRRT-208ENST00000469602 SERINC2Q96SA4 455 aa9.16□□□□□ -0.94
SRRT-208ENST00000469602 TUBB6Q9BUF5 446 aa9.16□□□□□ -0.94
SRRT-208ENST00000469602 NTMT1Q9BV86 223 aa9.16□□□□□ -0.94
SRRT-208ENST00000469602 C1QTNF3Q9BXJ4 246 aa9.16□□□□□ -0.94
SRRT-208ENST00000469602 ERVK-6Q9BXR3 956 aa9.16□□□□□ -0.94
SRRT-208ENST00000469602 MS4A8Q9BY19 250 aa9.16□□□□□ -0.94
SRRT-208ENST00000469602 COPS7BQ9H9Q2 264 aaPredicted RBP9.16□□□□□ -0.94
SRRT-208ENST00000469602 PRM3Q9NNZ6 103 aa9.16□□□□□ -0.94
SRRT-208ENST00000469602 PRDM7Q9NQW5 492 aa9.16□□□□□ -0.94
SRRT-208ENST00000469602 DCDC2Q9UHG0 476 aa9.16□□□□□ -0.94
SRRT-208ENST00000469602 RNF11Q9Y3C5 154 aa9.16□□□□□ -0.94
SRRT-208ENST00000469602 LRRK2Q5S007 2527 aa9.16□□□□□ -0.94
SRRT-208ENST00000469602 IGHV3-20A0A0C4DH32 117 aa9.15□□□□□ -0.94
SRRT-208ENST00000469602 FOXO6A8MYZ6 492 aa9.15□□□□□ -0.94
SRRT-208ENST00000469602 FAM227AF5H4B4 570 aa9.15□□□□□ -0.94
SRRT-208ENST00000469602 DLX3O60479 287 aa9.15□□□□□ -0.94
SRRT-208ENST00000469602 PRMT3O60678 531 aa9.15□□□□□ -0.94
SRRT-208ENST00000469602 SEC24DO94855 1032 aaPredicted RBP9.15□□□□□ -0.94
SRRT-208ENST00000469602 TGFB1P01137 390 aa9.15□□□□□ -0.94
SRRT-208ENST00000469602 ICAM2P13598 275 aa9.15□□□□□ -0.94
SRRT-208ENST00000469602 ATP5F1P24539 256 aaPredicted RBP9.15□□□□□ -0.94
SRRT-208ENST00000469602 CERS1P27544 350 aa9.15□□□□□ -0.94
SRRT-208ENST00000469602 ARL1P40616 181 aaPredicted RBP9.15□□□□□ -0.94
SRRT-208ENST00000469602 CCNG1P51959 295 aa9.15□□□□□ -0.94
SRRT-208ENST00000469602 MTTPP55157 894 aa9.15□□□□□ -0.94
SRRT-208ENST00000469602 AP2B1P63010 937 aa9.15□□□□□ -0.94
SRRT-208ENST00000469602 PHEXP78562 749 aa9.15□□□□□ -0.94
SRRT-208ENST00000469602 DDX39BQ13838 428 aaKnown RBP9.15□□□□□ -0.94
SRRT-208ENST00000469602 RUNX2Q13950 521 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms