RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 ABHD17CQ6PCB6 329 aa18.07■□□□□ 0.48
SMC4-209ENST00000468653 ZNF438Q7Z4V0 828 aa18.07■□□□□ 0.48
SMC4-209ENST00000468653 VN1R4Q7Z5H5 301 aa18.07■□□□□ 0.48
SMC4-209ENST00000468653 C17orf82Q86X59 251 aaPredicted RBP18.07■□□□□ 0.48
SMC4-209ENST00000468653 TICAM1Q8IUC6 712 aa18.07■□□□□ 0.48
SMC4-209ENST00000468653 MAML2Q8IZL2 1156 aaPredicted RBP18.07■□□□□ 0.48
SMC4-209ENST00000468653 AURKBQ96GD4 344 aaPredicted RBP18.07■□□□□ 0.48
SMC4-209ENST00000468653 OR2A5Q96R48 311 aa18.07■□□□□ 0.48
SMC4-209ENST00000468653 CPPED1Q9BRF8 314 aaPredicted RBP18.07■□□□□ 0.48
SMC4-209ENST00000468653 TBCDQ9BTW9 1192 aa18.07■□□□□ 0.48
SMC4-209ENST00000468653 SLC6A16Q9GZN6 736 aa18.07■□□□□ 0.48
SMC4-209ENST00000468653 ACTR3BQ9P1U1 418 aa18.07■□□□□ 0.48
SMC4-209ENST00000468653 SUSD2Q9UGT4 822 aa18.07■□□□□ 0.48
SMC4-209ENST00000468653 POMT2Q9UKY4 750 aa18.07■□□□□ 0.48
SMC4-209ENST00000468653 A0A0A6YYD5 115 aa18.06■□□□□ 0.48
SMC4-209ENST00000468653 HOXB9P17482 250 aaPredicted RBP18.06■□□□□ 0.48
SMC4-209ENST00000468653 DDX5P17844 614 aaKnown RBP18.06■□□□□ 0.48
SMC4-209ENST00000468653 DDCP20711 480 aa18.06■□□□□ 0.48
SMC4-209ENST00000468653 PTPN6P29350 595 aa18.06■□□□□ 0.48
SMC4-209ENST00000468653 SOX11P35716 441 aa18.06■□□□□ 0.48
SMC4-209ENST00000468653 ALDH9A1P49189 494 aa18.06■□□□□ 0.48
SMC4-209ENST00000468653 PPP1CAP62136 330 aa18.06■□□□□ 0.48
SMC4-209ENST00000468653 TRA2BP62995 288 aaKnown RBP18.06■□□□□ 0.48
SMC4-209ENST00000468653 RELAQ04206 551 aa18.06■□□□□ 0.48
SMC4-209ENST00000468653 MUM1Q2TAK8 710 aa18.06■□□□□ 0.48
SMC4-209ENST00000468653 ZNF793Q6ZN11 406 aa18.06■□□□□ 0.48
SMC4-209ENST00000468653 MMP21Q8N119 569 aa18.06■□□□□ 0.48
SMC4-209ENST00000468653 AMER3Q8N944 861 aa18.06■□□□□ 0.48
SMC4-209ENST00000468653 OR10A6Q8NH74 314 aa18.06■□□□□ 0.48
SMC4-209ENST00000468653 NT5CQ8TCD5 201 aa18.06■□□□□ 0.48
SMC4-209ENST00000468653 ZFYVE21Q9BQ24 234 aa18.06■□□□□ 0.48
SMC4-209ENST00000468653 IKZF5Q9H5V7 419 aa18.06■□□□□ 0.48
SMC4-209ENST00000468653 TMEM74BQ9NUR3 256 aa18.06■□□□□ 0.48
SMC4-209ENST00000468653 PILRAQ9UKJ1 303 aa18.06■□□□□ 0.48
SMC4-209ENST00000468653 PCDHGB4Q9UN71 923 aa18.06■□□□□ 0.48
SMC4-209ENST00000468653 SNX13Q9Y5W8 968 aa18.06■□□□□ 0.48
SMC4-209ENST00000468653 ARPC2O15144 300 aa18.05■□□□□ 0.48
SMC4-209ENST00000468653 EPN2O95208 641 aa18.05■□□□□ 0.48
SMC4-209ENST00000468653 PROS1P07225 676 aa18.05■□□□□ 0.48
SMC4-209ENST00000468653 HIST1H1TP22492 207 aaPredicted RBP18.05■□□□□ 0.48
SMC4-209ENST00000468653 ARRB1P49407 418 aaPredicted RBP18.05■□□□□ 0.48
SMC4-209ENST00000468653 OR4D2P58180 307 aa18.05■□□□□ 0.48
SMC4-209ENST00000468653 RAB8AP61006 207 aa18.05■□□□□ 0.48
SMC4-209ENST00000468653 BNIP3Q12983 259 aa18.05■□□□□ 0.48
SMC4-209ENST00000468653 SLC9A5Q14940 896 aa18.05■□□□□ 0.48
SMC4-209ENST00000468653 PLK5Q496M5 336 aa18.05■□□□□ 0.48
SMC4-209ENST00000468653 AASDHQ4L235 1098 aaPredicted RBP18.05■□□□□ 0.48
SMC4-209ENST00000468653 PTRH1Q86Y79 214 aaKnown RBP18.05■□□□□ 0.48
SMC4-209ENST00000468653 CAMKVQ8NCB2 501 aa18.05■□□□□ 0.48
SMC4-209ENST00000468653 OR4A15Q8NGL6 344 aa18.05■□□□□ 0.48
SMC4-209ENST00000468653 OR8K5Q8NH50 307 aa18.05■□□□□ 0.48
SMC4-209ENST00000468653 RERGQ96A58 199 aaPredicted RBP18.05■□□□□ 0.48
SMC4-209ENST00000468653 ELF4Q99607 663 aaPredicted RBP18.05■□□□□ 0.48
SMC4-209ENST00000468653 SEMA6CQ9H3T2 930 aa18.05■□□□□ 0.48
SMC4-209ENST00000468653 PRDM7Q9NQW5 492 aa18.05■□□□□ 0.48
SMC4-209ENST00000468653 USP22Q9UPT9 525 aa18.05■□□□□ 0.48
SMC4-209ENST00000468653 PCDHB3Q9Y5E6 796 aa18.05■□□□□ 0.48
SMC4-209ENST00000468653 CSNK1G3Q9Y6M4 447 aa18.05■□□□□ 0.48
SMC4-209ENST00000468653 MDC1Q14676 2089 aaKnown RBP18.05■□□□□ 0.48
SMC4-209ENST00000468653 RHPN2P1A8MT19 583 aa18.04■□□□□ 0.48
SMC4-209ENST00000468653 EVPLLA8MZ36 301 aa18.04■□□□□ 0.48
SMC4-209ENST00000468653 C4orf51C9J302 202 aa18.04■□□□□ 0.48
SMC4-209ENST00000468653 PRAMEF10O60809 474 aa18.04■□□□□ 0.48
SMC4-209ENST00000468653 GPR37L1O60883 481 aa18.04■□□□□ 0.48
SMC4-209ENST00000468653 C8BP07358 591 aa18.04■□□□□ 0.48
SMC4-209ENST00000468653 FAM58BPP0C7Q3 252 aa18.04■□□□□ 0.48
SMC4-209ENST00000468653 ATP6V1B2P21281 511 aa18.04■□□□□ 0.48
SMC4-209ENST00000468653 CDH3P22223 829 aa18.04■□□□□ 0.48
SMC4-209ENST00000468653 ATP5A1P25705 553 aaKnown RBP18.04■□□□□ 0.48
SMC4-209ENST00000468653 TSFMP43897 325 aaKnown RBP18.04■□□□□ 0.48
SMC4-209ENST00000468653 RHDQ02161 417 aa18.04■□□□□ 0.48
SMC4-209ENST00000468653 SLAMF1Q13291 335 aa18.04■□□□□ 0.48
SMC4-209ENST00000468653 SIM2Q14190 667 aaPredicted RBP18.04■□□□□ 0.48
SMC4-209ENST00000468653 LCN8Q6JVE9 175 aa18.04■□□□□ 0.48
SMC4-209ENST00000468653 IRGCQ6NXR0 463 aa18.04■□□□□ 0.48
SMC4-209ENST00000468653 SPPL2CQ8IUH8 684 aa18.04■□□□□ 0.48
SMC4-209ENST00000468653 ACOT4Q8N9L9 421 aa18.04■□□□□ 0.48
SMC4-209ENST00000468653 KCT2Q8NC54 265 aa18.04■□□□□ 0.48
SMC4-209ENST00000468653 TNIP2Q8NFZ5 429 aa18.04■□□□□ 0.48
SMC4-209ENST00000468653 OR2T12Q8NG77 320 aa18.04■□□□□ 0.48
SMC4-209ENST00000468653 GAL3ST3Q96A11 431 aa18.04■□□□□ 0.48
SMC4-209ENST00000468653 CIDECQ96AQ7 238 aaPredicted RBP18.04■□□□□ 0.48
SMC4-209ENST00000468653 TM4SF19Q96DZ7 209 aa18.04■□□□□ 0.48
SMC4-209ENST00000468653 ZNF583Q96ND8 569 aa18.04■□□□□ 0.48
SMC4-209ENST00000468653 COPS7BQ9H9Q2 264 aaPredicted RBP18.04■□□□□ 0.48
SMC4-209ENST00000468653 PILRBQ9UKJ0 227 aa18.04■□□□□ 0.48
SMC4-209ENST00000468653 VPS4AQ9UN37 437 aa18.04■□□□□ 0.48
SMC4-209ENST00000468653 URADA6NGE7 173 aa18.04■□□□□ 0.48
SMC4-209ENST00000468653 H3BNX3 289 aa18.04■□□□□ 0.48
SMC4-209ENST00000468653 CLIC1O00299 241 aa18.04■□□□□ 0.48
SMC4-209ENST00000468653 HRO43593 1189 aa18.04■□□□□ 0.48
SMC4-209ENST00000468653 GUCY1B2O75343 617 aa18.04■□□□□ 0.48
SMC4-209ENST00000468653 GMNNO75496 209 aa18.04■□□□□ 0.48
SMC4-209ENST00000468653 ABCB1P08183 1280 aaPredicted RBP18.04■□□□□ 0.48
SMC4-209ENST00000468653 NCK1P16333 377 aa18.04■□□□□ 0.48
SMC4-209ENST00000468653 PTDSS1P48651 473 aaKnown RBP18.04■□□□□ 0.48
SMC4-209ENST00000468653 CEP68Q76N32 757 aa18.04■□□□□ 0.48
SMC4-209ENST00000468653 PROSER1Q86XN7 944 aa18.04■□□□□ 0.48
SMC4-209ENST00000468653 TMEM105Q8N8V8 129 aa18.04■□□□□ 0.48
SMC4-209ENST00000468653 FAM47BQ8NA70 645 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms