RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 UBE3DQ7Z6J8 389 aa14.42□□□□□ -0.1
SNIP1-202ENST00000468040 PDSS2Q86YH6 399 aa14.42□□□□□ -0.1
SNIP1-202ENST00000468040 NLGN4XQ8N0W4 816 aa14.42□□□□□ -0.1
SNIP1-202ENST00000468040 METTL4Q8N3J2 472 aa14.42□□□□□ -0.1
SNIP1-202ENST00000468040 ZCCHC7Q8N3Z6 543 aaKnown RBP14.42□□□□□ -0.1
SNIP1-202ENST00000468040 METTL27Q8N6F8 245 aaPredicted RBP14.42□□□□□ -0.1
SNIP1-202ENST00000468040 NLGN4YQ8NFZ3 816 aaPredicted RBP14.42□□□□□ -0.1
SNIP1-202ENST00000468040 PPP3R2Q96LZ3 170 aa14.42□□□□□ -0.1
SNIP1-202ENST00000468040 NPLQ9BXD5 320 aaPredicted RBP14.42□□□□□ -0.1
SNIP1-202ENST00000468040 NUF2Q9BZD4 464 aa14.42□□□□□ -0.1
SNIP1-202ENST00000468040 DDX31Q9H8H2 851 aaKnown RBP14.42□□□□□ -0.1
SNIP1-202ENST00000468040 C1orf109Q9NX04 203 aa14.42□□□□□ -0.1
SNIP1-202ENST00000468040 PADI1Q9ULC6 663 aa14.42□□□□□ -0.1
SNIP1-202ENST00000468040 SPTBN4Q9H254 2564 aa14.42□□□□□ -0.1
SNIP1-202ENST00000468040 A0A0G2JN53 185 aa14.41□□□□□ -0.1
SNIP1-202ENST00000468040 ARHGAP10A1A4S6 786 aa14.41□□□□□ -0.1
SNIP1-202ENST00000468040 C4orf51C9J302 202 aa14.41□□□□□ -0.1
SNIP1-202ENST00000468040 C9J4A7 227 aa14.41□□□□□ -0.1
SNIP1-202ENST00000468040 SGK494L7N484 410 aa14.41□□□□□ -0.1
SNIP1-202ENST00000468040 RTCAO00442 366 aaKnown RBP14.41□□□□□ -0.1
SNIP1-202ENST00000468040 RDH16O75452 317 aa14.41□□□□□ -0.1
SNIP1-202ENST00000468040 TGDSO95455 350 aa14.41□□□□□ -0.1
SNIP1-202ENST00000468040 JUNP05412 331 aaKnown RBP14.41□□□□□ -0.1
SNIP1-202ENST00000468040 FBLP22087 321 aaKnown RBP14.41□□□□□ -0.1
SNIP1-202ENST00000468040 ATP5A1P25705 553 aaKnown RBP14.41□□□□□ -0.1
SNIP1-202ENST00000468040 OR1D4P47884 311 aa14.41□□□□□ -0.1
SNIP1-202ENST00000468040 GYS2P54840 703 aa14.41□□□□□ -0.1
SNIP1-202ENST00000468040 SNRPNP63162 240 aaKnown RBP14.41□□□□□ -0.1
SNIP1-202ENST00000468040 TUBB8Q3ZCM7 444 aa14.41□□□□□ -0.1
SNIP1-202ENST00000468040 ATP6AP1LQ52LC2 224 aa14.41□□□□□ -0.1
SNIP1-202ENST00000468040 ARHGAP40Q5TG30 622 aa14.41□□□□□ -0.1
SNIP1-202ENST00000468040 ZNF517Q6ZMY9 492 aaPredicted RBP14.41□□□□□ -0.1
SNIP1-202ENST00000468040 Q6ZSR9 355 aa14.41□□□□□ -0.1
SNIP1-202ENST00000468040 COMMD6Q7Z4G1 85 aa14.41□□□□□ -0.1
SNIP1-202ENST00000468040 C1orf52Q8N6N3 182 aaKnown RBP14.41□□□□□ -0.1
SNIP1-202ENST00000468040 ACOT4Q8N9L9 421 aa14.41□□□□□ -0.1
SNIP1-202ENST00000468040 OR2T11Q8NH01 316 aa14.41□□□□□ -0.1
SNIP1-202ENST00000468040 CHTF18Q8WVB6 975 aa14.41□□□□□ -0.1
SNIP1-202ENST00000468040 MR1Q95460 341 aa14.41□□□□□ -0.1
SNIP1-202ENST00000468040 COL26A1Q96A83 441 aa14.41□□□□□ -0.1
SNIP1-202ENST00000468040 TUBGCP3Q96CW5 907 aa14.41□□□□□ -0.1
SNIP1-202ENST00000468040 RNF31Q96EP0 1072 aa14.41□□□□□ -0.1
SNIP1-202ENST00000468040 SIKE1Q9BRV8 207 aa14.41□□□□□ -0.1
SNIP1-202ENST00000468040 ZNF717Q9BY31 904 aaPredicted RBP14.41□□□□□ -0.1
SNIP1-202ENST00000468040 MEAF6Q9HAF1 191 aa14.41□□□□□ -0.1
SNIP1-202ENST00000468040 LRTM1Q9HBL6 345 aa14.41□□□□□ -0.1
SNIP1-202ENST00000468040 LHX9Q9NQ69 397 aa14.41□□□□□ -0.1
SNIP1-202ENST00000468040 IFT80Q9P2H3 777 aaPredicted RBP14.41□□□□□ -0.1
SNIP1-202ENST00000468040 TMED5Q9Y3A6 229 aa14.41□□□□□ -0.1
SNIP1-202ENST00000468040 USH1CQ9Y6N9 552 aa14.41□□□□□ -0.1
SNIP1-202ENST00000468040 MAU2Q9Y6X3 613 aa14.41□□□□□ -0.1
SNIP1-202ENST00000468040 SPTBP11277 2137 aa14.41□□□□□ -0.1
SNIP1-202ENST00000468040 ATP6AP2A0A1C7CYW4 349 aa14.4□□□□□ -0.1
SNIP1-202ENST00000468040 ZNF860A6NHJ4 632 aa14.4□□□□□ -0.1
SNIP1-202ENST00000468040 LSM1O15116 133 aaKnown RBP14.4□□□□□ -0.1
SNIP1-202ENST00000468040 RAD1O60671 282 aa14.4□□□□□ -0.1
SNIP1-202ENST00000468040 SEC22BO75396 215 aa14.4□□□□□ -0.1
SNIP1-202ENST00000468040 ATP6AP2O75787 350 aa14.4□□□□□ -0.1
SNIP1-202ENST00000468040 MYO1DO94832 1006 aa14.4□□□□□ -0.1
SNIP1-202ENST00000468040 B3GALT4O96024 378 aa14.4□□□□□ -0.1
SNIP1-202ENST00000468040 CD63P08962 238 aa14.4□□□□□ -0.1
SNIP1-202ENST00000468040 LIPCP11150 499 aa14.4□□□□□ -0.1
SNIP1-202ENST00000468040 ALOX15P16050 662 aaPredicted RBP14.4□□□□□ -0.1
SNIP1-202ENST00000468040 ITGAXP20702 1163 aa14.4□□□□□ -0.1
SNIP1-202ENST00000468040 CERS1P27544 350 aa14.4□□□□□ -0.1
SNIP1-202ENST00000468040 BSGP35613 385 aa14.4□□□□□ -0.1
SNIP1-202ENST00000468040 COL9A2Q14055 689 aaPredicted RBP14.4□□□□□ -0.1
SNIP1-202ENST00000468040 SLC9A5Q14940 896 aa14.4□□□□□ -0.1
SNIP1-202ENST00000468040 GALNT18Q6P9A2 607 aa14.4□□□□□ -0.1
SNIP1-202ENST00000468040 CYP20A1Q6UW02 462 aa14.4□□□□□ -0.1
SNIP1-202ENST00000468040 ZNF793Q6ZN11 406 aa14.4□□□□□ -0.1
SNIP1-202ENST00000468040 TIPARPQ7Z3E1 657 aaKnown RBP14.4□□□□□ -0.1
SNIP1-202ENST00000468040 ZFAND4Q86XD8 727 aa14.4□□□□□ -0.1
SNIP1-202ENST00000468040 LRRC34Q8IZ02 419 aa14.4□□□□□ -0.1
SNIP1-202ENST00000468040 DTWD1Q8N5C7 304 aa14.4□□□□□ -0.1
SNIP1-202ENST00000468040 AMER3Q8N944 861 aa14.4□□□□□ -0.1
SNIP1-202ENST00000468040 ADAMTS18Q8TE60 1221 aa14.4□□□□□ -0.1
SNIP1-202ENST00000468040 FKBP10Q96AY3 582 aa14.4□□□□□ -0.1
SNIP1-202ENST00000468040 CHMP6Q96FZ7 201 aa14.4□□□□□ -0.1
SNIP1-202ENST00000468040 APIPQ96GX9 242 aa14.4□□□□□ -0.1
SNIP1-202ENST00000468040 C3orf30Q96M34 536 aa14.4□□□□□ -0.1
SNIP1-202ENST00000468040 ZNF317Q96PQ6 595 aaPredicted RBP14.4□□□□□ -0.1
SNIP1-202ENST00000468040 SORBS1Q9BX66 1292 aaKnown RBP14.4□□□□□ -0.1
SNIP1-202ENST00000468040 LYRM4Q9HD34 91 aa14.4□□□□□ -0.1
SNIP1-202ENST00000468040 FGFR1OP2Q9NVK5 253 aa14.4□□□□□ -0.1
SNIP1-202ENST00000468040 SIRT5Q9NXA8 310 aa14.4□□□□□ -0.1
SNIP1-202ENST00000468040 DKK4Q9UBT3 224 aa14.4□□□□□ -0.1
SNIP1-202ENST00000468040 MAP4K5Q9Y4K4 846 aa14.4□□□□□ -0.1
SNIP1-202ENST00000468040 SPACA6W5XKT8 324 aa14.4□□□□□ -0.1
SNIP1-202ENST00000468040 A0A0A6YYD5 115 aa14.39□□□□□ -0.11
SNIP1-202ENST00000468040 TEX51A0A1B0GUA7 166 aa14.39□□□□□ -0.11
SNIP1-202ENST00000468040 PCDH7O60245 1069 aa14.39□□□□□ -0.11
SNIP1-202ENST00000468040 EEDO75530 441 aaKnown RBP14.39□□□□□ -0.11
SNIP1-202ENST00000468040 ALBP02768 609 aa14.39□□□□□ -0.11
SNIP1-202ENST00000468040 KLK1P06870 262 aa14.39□□□□□ -0.11
SNIP1-202ENST00000468040 TROVE2P10155 538 aaKnown RBP eCLIP14.39□□□□□ -0.11
SNIP1-202ENST00000468040 IL10P22301 178 aa14.39□□□□□ -0.11
SNIP1-202ENST00000468040 TIA1P31483 386 aaKnown RBP eCLIP14.39□□□□□ -0.116e-8■■■□□ 15
SNIP1-202ENST00000468040 LSP1P33241 339 aa14.39□□□□□ -0.11
SNIP1-202ENST00000468040 MAPK12P53778 367 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms