RNA–Protein interactions for RNA: ENST00000467707.1

GAPVD1-211, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 787 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-211ENST00000467707 EXOC6BQ9Y2D4 811 aa4.36□□□□□ -1.71
GAPVD1-211ENST00000467707 MRPS28Q9Y2Q9 187 aaKnown RBP4.36□□□□□ -1.71
GAPVD1-211ENST00000467707 CSNK1G3Q9Y6M4 447 aa4.36□□□□□ -1.71
GAPVD1-211ENST00000467707 SPAG9O60271 1321 aaKnown RBP4.36□□□□□ -1.71
GAPVD1-211ENST00000467707 A0A087WYN8 130 aa4.35□□□□□ -1.71
GAPVD1-211ENST00000467707 TRBV2A0A0J9YWF9 115 aa4.35□□□□□ -1.71
GAPVD1-211ENST00000467707 SLC15A5A6NIM6 579 aa4.35□□□□□ -1.71
GAPVD1-211ENST00000467707 KRT86O43790 486 aa4.35□□□□□ -1.71
GAPVD1-211ENST00000467707 MTRF1O75570 445 aaKnown RBP4.35□□□□□ -1.71
GAPVD1-211ENST00000467707 FGF19O95750 216 aa4.35□□□□□ -1.71
GAPVD1-211ENST00000467707 MT-ND3P03897 115 aa4.35□□□□□ -1.71
GAPVD1-211ENST00000467707 MMP10P09238 476 aa4.35□□□□□ -1.71
GAPVD1-211ENST00000467707 CYP3A5P20815 502 aa4.35□□□□□ -1.71
GAPVD1-211ENST00000467707 ACKR3P25106 362 aa4.35□□□□□ -1.71
GAPVD1-211ENST00000467707 FEN1P39748 380 aaKnown RBP4.35□□□□□ -1.71
GAPVD1-211ENST00000467707 CCR4P51679 360 aa4.35□□□□□ -1.71
GAPVD1-211ENST00000467707 KRT81Q14533 505 aa4.35□□□□□ -1.71
GAPVD1-211ENST00000467707 LRRC37A5PQ49AS3 106 aa4.35□□□□□ -1.71
GAPVD1-211ENST00000467707 BSPRYQ5W0U4 402 aa4.35□□□□□ -1.71
GAPVD1-211ENST00000467707 TRIM65Q6PJ69 517 aa4.35□□□□□ -1.71
GAPVD1-211ENST00000467707 B3GLCTQ6Y288 498 aa4.35□□□□□ -1.71
GAPVD1-211ENST00000467707 C17orf107Q6ZR85 190 aa4.35□□□□□ -1.71
GAPVD1-211ENST00000467707 TOM1L2Q6ZVM7 507 aa4.35□□□□□ -1.71
GAPVD1-211ENST00000467707 C5orf24Q7Z6I8 188 aa4.35□□□□□ -1.71
GAPVD1-211ENST00000467707 NLRP14Q86W24 1093 aa4.35□□□□□ -1.71
GAPVD1-211ENST00000467707 ZC3H3Q8IXZ2 948 aaKnown RBP4.35□□□□□ -1.71
GAPVD1-211ENST00000467707 PEX5LQ8IYB4 626 aa4.35□□□□□ -1.71
GAPVD1-211ENST00000467707 WDSUB1Q8N9V3 476 aa4.35□□□□□ -1.71
GAPVD1-211ENST00000467707 SLCO2A1Q92959 643 aa4.35□□□□□ -1.71
GAPVD1-211ENST00000467707 ZNF486Q96H40 463 aaPredicted RBP4.35□□□□□ -1.71
GAPVD1-211ENST00000467707 OVOL2Q9BRP0 275 aa4.35□□□□□ -1.71
GAPVD1-211ENST00000467707 PAPOLGQ9BWT3 736 aaKnown RBP4.35□□□□□ -1.71
GAPVD1-211ENST00000467707 MTIF3Q9H2K0 278 aaKnown RBP4.35□□□□□ -1.71
GAPVD1-211ENST00000467707 TMEM245Q9H330 911 aa4.35□□□□□ -1.71
GAPVD1-211ENST00000467707 MARCH7Q9H992 704 aa4.35□□□□□ -1.71
GAPVD1-211ENST00000467707 IL19Q9UHD0 177 aa4.35□□□□□ -1.71
GAPVD1-211ENST00000467707 WIPI2Q9Y4P8 454 aa4.35□□□□□ -1.71
GAPVD1-211ENST00000467707 CNTNAP2Q9UHC6 1331 aa4.35□□□□□ -1.71
GAPVD1-211ENST00000467707 CHUKO15111 745 aa4.34□□□□□ -1.71
GAPVD1-211ENST00000467707 HMOX1P09601 288 aa4.34□□□□□ -1.71
GAPVD1-211ENST00000467707 EDNRAP25101 427 aa4.34□□□□□ -1.71
GAPVD1-211ENST00000467707 GPR183P32249 361 aa4.34□□□□□ -1.71
GAPVD1-211ENST00000467707 SLC6A12P48065 614 aa4.34□□□□□ -1.71
GAPVD1-211ENST00000467707 SPANXN4Q5MJ08 99 aa4.34□□□□□ -1.71
GAPVD1-211ENST00000467707 SNRNP48Q6IEG0 339 aaKnown RBP4.34□□□□□ -1.71
GAPVD1-211ENST00000467707 FRRS1Q6ZNA5 592 aa4.34□□□□□ -1.71
GAPVD1-211ENST00000467707 ZNF614Q8N883 585 aa4.34□□□□□ -1.71
GAPVD1-211ENST00000467707 CLEC1AQ8NC01 280 aa4.34□□□□□ -1.71
GAPVD1-211ENST00000467707 NUP37Q8NFH4 326 aa4.34□□□□□ -1.71
GAPVD1-211ENST00000467707 OR5M9Q8NGP3 310 aa4.34□□□□□ -1.71
GAPVD1-211ENST00000467707 C8orf46Q8TAG6 207 aa4.34□□□□□ -1.71
GAPVD1-211ENST00000467707 SPATA18Q8TC71 538 aa4.34□□□□□ -1.71
GAPVD1-211ENST00000467707 HAS2Q92819 552 aa4.34□□□□□ -1.71
GAPVD1-211ENST00000467707 SLC35C1Q96A29 364 aa4.34□□□□□ -1.71
GAPVD1-211ENST00000467707 NSMCE3Q96MG7 304 aa4.34□□□□□ -1.71
GAPVD1-211ENST00000467707 DGCR6LQ9BY27 220 aa4.34□□□□□ -1.71
GAPVD1-211ENST00000467707 WWTR1Q9GZV5 400 aa4.34□□□□□ -1.71
GAPVD1-211ENST00000467707 THAP9Q9H5L6 903 aa4.34□□□□□ -1.71
GAPVD1-211ENST00000467707 ZDHHC18Q9NUE0 388 aa4.34□□□□□ -1.71
GAPVD1-211ENST00000467707 TMEM181Q9P2C4 612 aa4.34□□□□□ -1.71
GAPVD1-211ENST00000467707 TRIM10Q9UDY6 481 aa4.34□□□□□ -1.71
GAPVD1-211ENST00000467707 TDRKHQ9Y2W6 561 aaKnown RBP4.34□□□□□ -1.71
GAPVD1-211ENST00000467707 ANGPTL3Q9Y5C1 460 aa4.34□□□□□ -1.71
GAPVD1-211ENST00000467707 ETV7Q9Y603 341 aa4.34□□□□□ -1.71
GAPVD1-211ENST00000467707 SPATA31D1Q6ZQQ2 1576 aa4.33□□□□□ -1.72
GAPVD1-211ENST00000467707 NEDD4P46934 1319 aa4.33□□□□□ -1.72
GAPVD1-211ENST00000467707 A0A087X002 238 aa4.33□□□□□ -1.72
GAPVD1-211ENST00000467707 A0A0U1RQG5 324 aaPredicted RBP4.33□□□□□ -1.72
GAPVD1-211ENST00000467707 C5orf51A6NDU8 294 aa4.33□□□□□ -1.72
GAPVD1-211ENST00000467707 SLC9B1P1A6NJY1 282 aa4.33□□□□□ -1.72
GAPVD1-211ENST00000467707 MAGEB2O15479 319 aa4.33□□□□□ -1.72
GAPVD1-211ENST00000467707 MLNRO43193 412 aa4.33□□□□□ -1.72
GAPVD1-211ENST00000467707 HTATSF1O43719 755 aaKnown RBP4.33□□□□□ -1.72
GAPVD1-211ENST00000467707 ZFAND5O76080 213 aa4.33□□□□□ -1.72
GAPVD1-211ENST00000467707 SERPINF2P08697 491 aa4.33□□□□□ -1.72
GAPVD1-211ENST00000467707 ODC1P11926 461 aa4.33□□□□□ -1.72
GAPVD1-211ENST00000467707 SKILP12757 684 aa4.33□□□□□ -1.72
GAPVD1-211ENST00000467707 ZNF18P17022 549 aa4.33□□□□□ -1.72
GAPVD1-211ENST00000467707 STIP1P31948 543 aaKnown RBP4.33□□□□□ -1.72
GAPVD1-211ENST00000467707 MMP12P39900 470 aa4.33□□□□□ -1.72
GAPVD1-211ENST00000467707 OPRL1P41146 370 aa4.33□□□□□ -1.72
GAPVD1-211ENST00000467707 CRIP2P52943 208 aaPredicted RBP4.33□□□□□ -1.72
GAPVD1-211ENST00000467707 GSCP56915 257 aaPredicted RBP4.33□□□□□ -1.72
GAPVD1-211ENST00000467707 ERVK-16P61578 105 aa4.33□□□□□ -1.72
GAPVD1-211ENST00000467707 PDE7AQ13946 482 aa4.33□□□□□ -1.72
GAPVD1-211ENST00000467707 STX1AQ16623 288 aa4.33□□□□□ -1.72
GAPVD1-211ENST00000467707 HFEQ30201 348 aa4.33□□□□□ -1.72
GAPVD1-211ENST00000467707 ADAM5Q6NVV9 412 aa4.33□□□□□ -1.72
GAPVD1-211ENST00000467707 KIF6Q6ZMV9 814 aa4.33□□□□□ -1.72
GAPVD1-211ENST00000467707 Q6ZVQ6 151 aa4.33□□□□□ -1.72
GAPVD1-211ENST00000467707 ZNF329Q86UD4 541 aa4.33□□□□□ -1.72
GAPVD1-211ENST00000467707 C17orf64Q86WR6 236 aa4.33□□□□□ -1.72
GAPVD1-211ENST00000467707 CATSPERDQ86XM0 798 aa4.33□□□□□ -1.72
GAPVD1-211ENST00000467707 SERPINA12Q8IW75 414 aa4.33□□□□□ -1.72
GAPVD1-211ENST00000467707 DND1Q8IYX4 353 aaKnown RBP4.33□□□□□ -1.72
GAPVD1-211ENST00000467707 SLC43A2Q8N370 569 aa4.33□□□□□ -1.72
GAPVD1-211ENST00000467707 FBXW8Q8N3Y1 598 aa4.33□□□□□ -1.72
GAPVD1-211ENST00000467707 SFRP1Q8N474 314 aa4.33□□□□□ -1.72
GAPVD1-211ENST00000467707 CHCHD4Q8N4Q1 142 aa4.33□□□□□ -1.72
GAPVD1-211ENST00000467707 ARL10Q8N8L6 244 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms