RNA–Protein interactions for RNA: ENST00000467663.5

CTNS-205, Transcript of cystinosin, lysosomal cystine transporter, human

TSL 3

Gene CTNS, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNS-205	ENST00000467663	SELENOM	Q8WWX9	145 aa		11.49	□□□□□ -0.57
CTNS-205	ENST00000467663	MR1	Q95460	341 aa		11.49	□□□□□ -0.57
CTNS-205	ENST00000467663	TUBGCP3	Q96CW5	907 aa		11.49	□□□□□ -0.57
CTNS-205	ENST00000467663	ABHD17A	Q96GS6	310 aa		11.49	□□□□□ -0.57
CTNS-205	ENST00000467663	TCTN2	Q96GX1	697 aa		11.49	□□□□□ -0.57
CTNS-205	ENST00000467663	SARG	Q9BW04	601 aa		11.49	□□□□□ -0.57
CTNS-205	ENST00000467663	KLHL25	Q9H0H3	589 aa		11.49	□□□□□ -0.57
CTNS-205	ENST00000467663	MYLK2	Q9H1R3	596 aa		11.49	□□□□□ -0.57
CTNS-205	ENST00000467663	CHST8	Q9H2A9	424 aa		11.49	□□□□□ -0.57
CTNS-205	ENST00000467663	FAM60A	Q9NP50	221 aa		11.49	□□□□□ -0.57
CTNS-205	ENST00000467663	TNFRSF12A	Q9NP84	129 aa		11.49	□□□□□ -0.57
CTNS-205	ENST00000467663	ACSS2	Q9NR19	701 aa		11.49	□□□□□ -0.57
CTNS-205	ENST00000467663	SPHK1	Q9NYA1	384 aa		11.49	□□□□□ -0.57
CTNS-205	ENST00000467663	SNX7	Q9UNH6	387 aa		11.49	□□□□□ -0.57
CTNS-205	ENST00000467663	TMED5	Q9Y3A6	229 aa		11.49	□□□□□ -0.57
CTNS-205	ENST00000467663	RNF11	Q9Y3C5	154 aa		11.49	□□□□□ -0.57
CTNS-205	ENST00000467663	FIS1	Q9Y3D6	152 aa		11.49	□□□□□ -0.57
CTNS-205	ENST00000467663	TIMM22	Q9Y584	194 aa		11.49	□□□□□ -0.57
CTNS-205	ENST00000467663	SPTA1	P02549	2419 aa		11.48	□□□□□ -0.57
CTNS-205	ENST00000467663		A0A0J9YY10	115 aa		11.48	□□□□□ -0.57
CTNS-205	ENST00000467663		A0A1W2PPV9	198 aa		11.48	□□□□□ -0.57
CTNS-205	ENST00000467663	TMEM233	B4DJY2	109 aa		11.48	□□□□□ -0.57
CTNS-205	ENST00000467663		E7EQ34	232 aa		11.48	□□□□□ -0.57
CTNS-205	ENST00000467663		H3BMH7	237 aa		11.48	□□□□□ -0.57
CTNS-205	ENST00000467663	FCHO1	O14526	889 aa		11.48	□□□□□ -0.57
CTNS-205	ENST00000467663	UBD	O15205	165 aa		11.48	□□□□□ -0.57
CTNS-205	ENST00000467663	RAB40AL	P0C0E4	278 aa		11.48	□□□□□ -0.57
CTNS-205	ENST00000467663	IDO1	P14902	403 aa		11.48	□□□□□ -0.57
CTNS-205	ENST00000467663	MAPK1	P28482	360 aa		11.48	□□□□□ -0.57
CTNS-205	ENST00000467663	EPHA3	P29320	983 aa		11.48	□□□□□ -0.57
CTNS-205	ENST00000467663	PEBP1	P30086	187 aa	Known RBP	11.48	□□□□□ -0.57
CTNS-205	ENST00000467663	MNAT1	P51948	309 aa		11.48	□□□□□ -0.57
CTNS-205	ENST00000467663	ARFIP1	P53367	373 aa		11.48	□□□□□ -0.57
CTNS-205	ENST00000467663	FOXA1	P55317	472 aa		11.48	□□□□□ -0.57
CTNS-205	ENST00000467663	ITGA1	P56199	1179 aa		11.48	□□□□□ -0.57
CTNS-205	ENST00000467663	STX1B	P61266	288 aa		11.48	□□□□□ -0.57
CTNS-205	ENST00000467663	ERVK-8	P63133	956 aa		11.48	□□□□□ -0.57
CTNS-205	ENST00000467663	FASTK	Q14296	549 aa	Known RBP	11.48	□□□□□ -0.57
CTNS-205	ENST00000467663	ZIC1	Q15915	447 aa		11.48	□□□□□ -0.57
CTNS-205	ENST00000467663	CPSF6	Q16630	551 aa	Known RBP eCLIP	11.48	□□□□□ -0.57
CTNS-205	ENST00000467663	IMPG1	Q17R60	797 aa		11.48	□□□□□ -0.57
CTNS-205	ENST00000467663	NXN	Q6DKJ4	435 aa		11.48	□□□□□ -0.57
CTNS-205	ENST00000467663	LCN10	Q6JVE6	187 aa		11.48	□□□□□ -0.57
CTNS-205	ENST00000467663	SUSD1	Q6UWL2	747 aa		11.48	□□□□□ -0.57
CTNS-205	ENST00000467663	ZNF771	Q7L3S4	317 aa	Predicted RBP	11.48	□□□□□ -0.57
CTNS-205	ENST00000467663	CLNK	Q7Z7G1	428 aa		11.48	□□□□□ -0.57
CTNS-205	ENST00000467663	TMPRSS11B	Q86T26	416 aa		11.48	□□□□□ -0.57
CTNS-205	ENST00000467663	MTDH	Q86UE4	582 aa	Known RBP	11.48	□□□□□ -0.57
CTNS-205	ENST00000467663	TRIM73	Q86UV7	250 aa		11.48	□□□□□ -0.57
CTNS-205	ENST00000467663	APLF	Q8IW19	511 aa	Predicted RBP	11.48	□□□□□ -0.57
CTNS-205	ENST00000467663	C19orf47	Q8N9M1	422 aa	Known RBP	11.48	□□□□□ -0.57
CTNS-205	ENST00000467663	LINC01555	Q8NAE3	123 aa		11.48	□□□□□ -0.57
CTNS-205	ENST00000467663	PPFIBP2	Q8ND30	876 aa		11.48	□□□□□ -0.57
CTNS-205	ENST00000467663	WDR20	Q8TBZ3	569 aa		11.48	□□□□□ -0.57
CTNS-205	ENST00000467663	THAP4	Q8WY91	577 aa		11.48	□□□□□ -0.57
CTNS-205	ENST00000467663	ZUFSP	Q96AP4	578 aa		11.48	□□□□□ -0.57
CTNS-205	ENST00000467663	ERP27	Q96DN0	273 aa		11.48	□□□□□ -0.57
CTNS-205	ENST00000467663	CLIP3	Q96DZ5	547 aa		11.48	□□□□□ -0.57
CTNS-205	ENST00000467663	IL17F	Q96PD4	163 aa		11.48	□□□□□ -0.57
CTNS-205	ENST00000467663	CDK15	Q96Q40	435 aa		11.48	□□□□□ -0.57
CTNS-205	ENST00000467663	RHBG	Q9H310	441 aa		11.48	□□□□□ -0.57
CTNS-205	ENST00000467663	TUBB1	Q9H4B7	451 aa		11.48	□□□□□ -0.57
CTNS-205	ENST00000467663	ACTR5	Q9H9F9	607 aa	Predicted RBP	11.48	□□□□□ -0.57
CTNS-205	ENST00000467663	MRPS30	Q9NP92	439 aa	Known RBP	11.48	□□□□□ -0.57
CTNS-205	ENST00000467663	ASIC5	Q9NY37	505 aa		11.48	□□□□□ -0.57
CTNS-205	ENST00000467663	TAC3	Q9UHF0	121 aa		11.48	□□□□□ -0.57
CTNS-205	ENST00000467663	ZNF490	Q9ULM2	529 aa	Predicted RBP	11.48	□□□□□ -0.57
CTNS-205	ENST00000467663	PLAGL1	Q9UM63	463 aa		11.48	□□□□□ -0.57
CTNS-205	ENST00000467663	MAPRE3	Q9UPY8	281 aa		11.48	□□□□□ -0.57
CTNS-205	ENST00000467663	KLK4	Q9Y5K2	254 aa		11.48	□□□□□ -0.57
CTNS-205	ENST00000467663		A0A1B0GTL3	188 aa		11.47	□□□□□ -0.57
CTNS-205	ENST00000467663	ZNF749	O43361	778 aa		11.47	□□□□□ -0.57
CTNS-205	ENST00000467663	HBQ1	P09105	142 aa		11.47	□□□□□ -0.57
CTNS-205	ENST00000467663	LINC00032	P0C843	101 aa		11.47	□□□□□ -0.57
CTNS-205	ENST00000467663	EZR	P15311	586 aa	Known RBP	11.47	□□□□□ -0.57
CTNS-205	ENST00000467663	RPS18	P62269	152 aa	Known RBP	11.47	□□□□□ -0.57
CTNS-205	ENST00000467663	EMX2	Q04743	252 aa		11.47	□□□□□ -0.57
CTNS-205	ENST00000467663	TSTA3	Q13630	321 aa	Predicted RBP	11.47	□□□□□ -0.57
CTNS-205	ENST00000467663	SQLE	Q14534	574 aa		11.47	□□□□□ -0.57
CTNS-205	ENST00000467663	MAPRE2	Q15555	327 aa		11.47	□□□□□ -0.57
CTNS-205	ENST00000467663	VWA5B1	Q5TIE3	1220 aa		11.47	□□□□□ -0.57
CTNS-205	ENST00000467663	ZNF385C	Q66K41	422 aa	Predicted RBP	11.47	□□□□□ -0.57
CTNS-205	ENST00000467663	TMIGD1	Q6UXZ0	262 aa		11.47	□□□□□ -0.57
CTNS-205	ENST00000467663	FITM2	Q8N6M3	262 aa		11.47	□□□□□ -0.57
CTNS-205	ENST00000467663	OR2L3	Q8NG85	312 aa		11.47	□□□□□ -0.57
CTNS-205	ENST00000467663	OR7G3	Q8NG95	312 aa		11.47	□□□□□ -0.57
CTNS-205	ENST00000467663	TSPEAR	Q8WU66	669 aa		11.47	□□□□□ -0.57
CTNS-205	ENST00000467663	CMTM5	Q96DZ9	223 aa		11.47	□□□□□ -0.57
CTNS-205	ENST00000467663	THAP11	Q96EK4	314 aa		11.47	□□□□□ -0.57
CTNS-205	ENST00000467663	CMTM7	Q96FZ5	175 aa		11.47	□□□□□ -0.57
CTNS-205	ENST00000467663	OR52B2	Q96RD2	323 aa		11.47	□□□□□ -0.57
CTNS-205	ENST00000467663	KCNA7	Q96RP8	456 aa		11.47	□□□□□ -0.57
CTNS-205	ENST00000467663	SERPINI1	Q99574	410 aa		11.47	□□□□□ -0.57
CTNS-205	ENST00000467663	DPH2	Q9BQC3	489 aa	Predicted RBP	11.47	□□□□□ -0.57
CTNS-205	ENST00000467663	NLN	Q9BYT8	704 aa		11.47	□□□□□ -0.57
CTNS-205	ENST00000467663	WDR55	Q9H6Y2	383 aa	Predicted RBP	11.47	□□□□□ -0.57
CTNS-205	ENST00000467663	AKTIP	Q9H8T0	292 aa		11.47	□□□□□ -0.57
CTNS-205	ENST00000467663	TXLNG	Q9NUQ3	528 aa		11.47	□□□□□ -0.57
CTNS-205	ENST00000467663	SIRT5	Q9NXA8	310 aa		11.47	□□□□□ -0.57
CTNS-205	ENST00000467663	NOP53	Q9NZM5	478 aa	Known RBP	11.47	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms