RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 CCDC181Q5TID7 509 aa9.44□□□□□ -0.9
HDAC3-203ENST00000467533 HECTD2Q5U5R9 776 aa9.44□□□□□ -0.9
HDAC3-203ENST00000467533 LDB1Q86U70 411 aaPredicted RBP9.44□□□□□ -0.9
HDAC3-203ENST00000467533 SLC26A11Q86WA9 606 aa9.44□□□□□ -0.9
HDAC3-203ENST00000467533 CDKL3Q8IVW4 592 aaPredicted RBP9.44□□□□□ -0.9
HDAC3-203ENST00000467533 OR13J1Q8NGT2 312 aa9.44□□□□□ -0.9
HDAC3-203ENST00000467533 OR4L1Q8NH43 312 aa9.44□□□□□ -0.9
HDAC3-203ENST00000467533 NEIL3Q8TAT5 605 aa9.44□□□□□ -0.9
HDAC3-203ENST00000467533 TMEM171Q8WVE6 324 aa9.44□□□□□ -0.9
HDAC3-203ENST00000467533 THAP11Q96EK4 314 aa9.44□□□□□ -0.9
HDAC3-203ENST00000467533 SCYL1Q96KG9 808 aa9.44□□□□□ -0.9
HDAC3-203ENST00000467533 TRIB1Q96RU8 372 aa9.44□□□□□ -0.9
HDAC3-203ENST00000467533 PKP4Q99569 1192 aa9.44□□□□□ -0.9
HDAC3-203ENST00000467533 PLA2G12AQ9BZM1 189 aa9.44□□□□□ -0.9
HDAC3-203ENST00000467533 HSD3B7Q9H2F3 369 aa9.44□□□□□ -0.9
HDAC3-203ENST00000467533 ZNF703Q9H7S9 590 aaPredicted RBP9.44□□□□□ -0.9
HDAC3-203ENST00000467533 LRRC40Q9H9A6 602 aa9.44□□□□□ -0.9
HDAC3-203ENST00000467533 SEMA4BQ9NPR2 832 aaPredicted RBP9.44□□□□□ -0.9
HDAC3-203ENST00000467533 NECTIN3Q9NQS3 549 aa9.44□□□□□ -0.9
HDAC3-203ENST00000467533 PRDM9Q9NQV7 894 aa9.44□□□□□ -0.9
HDAC3-203ENST00000467533 PNO1Q9NRX1 252 aaKnown RBP9.44□□□□□ -0.9
HDAC3-203ENST00000467533 ANAPC5Q9UJX4 755 aa9.44□□□□□ -0.9
HDAC3-203ENST00000467533 CDC42EP3Q9UKI2 254 aa9.44□□□□□ -0.9
HDAC3-203ENST00000467533 CAMK2AQ9UQM7 478 aa9.44□□□□□ -0.9
HDAC3-203ENST00000467533 ATG4BQ9Y4P1 393 aa9.44□□□□□ -0.9
HDAC3-203ENST00000467533 SLC22A7Q9Y694 548 aa9.44□□□□□ -0.9
HDAC3-203ENST00000467533 DOCK7Q96N67 2140 aa9.43□□□□□ -0.9
HDAC3-203ENST00000467533 KCNE1BA0A087WTH5 132 aa9.43□□□□□ -0.9
HDAC3-203ENST00000467533 IGKV3D-11A0A0A0MRZ8 115 aa9.43□□□□□ -0.9
HDAC3-203ENST00000467533 DEFB108AA8MXU0 73 aa9.43□□□□□ -0.9
HDAC3-203ENST00000467533 APOC4-APOC2K7ER74 178 aa9.43□□□□□ -0.9
HDAC3-203ENST00000467533 PSMD12O00232 456 aaPredicted RBP9.43□□□□□ -0.9
HDAC3-203ENST00000467533 SIAH2O43255 324 aa9.43□□□□□ -0.9
HDAC3-203ENST00000467533 SPOPO43791 374 aa9.43□□□□□ -0.9
HDAC3-203ENST00000467533 GALR3O60755 368 aaPredicted RBP9.43□□□□□ -0.9
HDAC3-203ENST00000467533 MATN4O95460 622 aa9.43□□□□□ -0.9
HDAC3-203ENST00000467533 SLC16A8O95907 504 aa9.43□□□□□ -0.9
HDAC3-203ENST00000467533 SYF2O95926 243 aaKnown RBP9.43□□□□□ -0.9
HDAC3-203ENST00000467533 APOC2P02655 101 aa9.43□□□□□ -0.9
HDAC3-203ENST00000467533 CATP04040 527 aaKnown RBP9.43□□□□□ -0.9
HDAC3-203ENST00000467533 TMIGD3P0DMS9 266 aaPredicted RBP9.43□□□□□ -0.9
HDAC3-203ENST00000467533 CCL3P10147 92 aa9.43□□□□□ -0.9
HDAC3-203ENST00000467533 PSMA3P25788 255 aa9.43□□□□□ -0.9
HDAC3-203ENST00000467533 CYLC1P35663 651 aaPredicted RBP9.43□□□□□ -0.9
HDAC3-203ENST00000467533 CPOXP36551 454 aa9.43□□□□□ -0.9
HDAC3-203ENST00000467533 COILP38432 576 aaPredicted RBP9.43□□□□□ -0.9
HDAC3-203ENST00000467533 PRAMEP78395 509 aa9.43□□□□□ -0.9
HDAC3-203ENST00000467533 SRSF2Q01130 221 aaKnown RBP9.43□□□□□ -0.9
HDAC3-203ENST00000467533 TERF2Q15554 542 aa9.43□□□□□ -0.9
HDAC3-203ENST00000467533 CLEC12BQ2HXU8 276 aa9.43□□□□□ -0.9
HDAC3-203ENST00000467533 DEFB134Q4QY38 66 aa9.43□□□□□ -0.9
HDAC3-203ENST00000467533 RNF187Q5TA31 235 aaPredicted RBP9.43□□□□□ -0.9
HDAC3-203ENST00000467533 NSUN5P2Q63ZY6 315 aa9.43□□□□□ -0.9
HDAC3-203ENST00000467533 PLEKHM3Q6ZWE6 761 aa9.43□□□□□ -0.9
HDAC3-203ENST00000467533 ZNF534Q76KX8 674 aa9.43□□□□□ -0.9
HDAC3-203ENST00000467533 GOLM1Q8NBJ4 401 aa9.43□□□□□ -0.9
HDAC3-203ENST00000467533 ZNF480Q8WV37 535 aa9.43□□□□□ -0.9
HDAC3-203ENST00000467533 SLC13A3Q8WWT9 602 aa9.43□□□□□ -0.9
HDAC3-203ENST00000467533 TM4SF19Q96DZ7 209 aa9.43□□□□□ -0.9
HDAC3-203ENST00000467533 ZBED6CLQ96FA7 236 aaPredicted RBP9.43□□□□□ -0.9
HDAC3-203ENST00000467533 PDLIM2Q96JY6 352 aa9.43□□□□□ -0.9
HDAC3-203ENST00000467533 REG4Q9BYZ8 158 aa9.43□□□□□ -0.9
HDAC3-203ENST00000467533 RBSNQ9H1K0 784 aa9.43□□□□□ -0.9
HDAC3-203ENST00000467533 RHBGQ9H310 441 aa9.43□□□□□ -0.9
HDAC3-203ENST00000467533 CXorf56Q9H5V9 222 aa9.43□□□□□ -0.9
HDAC3-203ENST00000467533 TMEM184CQ9NVA4 438 aa9.43□□□□□ -0.9
HDAC3-203ENST00000467533 MYOTQ9UBF9 498 aa9.43□□□□□ -0.9
HDAC3-203ENST00000467533 SLC2A6Q9UGQ3 507 aa9.43□□□□□ -0.9
HDAC3-203ENST00000467533 BOKQ9UMX3 212 aaPredicted RBP9.43□□□□□ -0.9
HDAC3-203ENST00000467533 GTF3C3Q9Y5Q9 886 aa9.43□□□□□ -0.9
HDAC3-203ENST00000467533 HEATR5AQ86XA9 2040 aa9.43□□□□□ -0.9
HDAC3-203ENST00000467533 MBD3L3A6NE82 208 aaPredicted RBP9.42□□□□□ -0.9
HDAC3-203ENST00000467533 E7ENX8 843 aa9.42□□□□□ -0.9
HDAC3-203ENST00000467533 CTIFO43310 598 aaKnown RBP9.42□□□□□ -0.9
HDAC3-203ENST00000467533 AVILO75366 819 aa9.42□□□□□ -0.9
HDAC3-203ENST00000467533 IL18BPO95998 194 aa9.42□□□□□ -0.9
HDAC3-203ENST00000467533 B3GALT4O96024 378 aa9.42□□□□□ -0.9
HDAC3-203ENST00000467533 TMEM253P0C7T8 217 aa9.42□□□□□ -0.9
HDAC3-203ENST00000467533 PIGAP37287 484 aa9.42□□□□□ -0.9
HDAC3-203ENST00000467533 EIF3BP55884 814 aaKnown RBP9.42□□□□□ -0.9
HDAC3-203ENST00000467533 KCNJ2P63252 427 aa9.42□□□□□ -0.9
HDAC3-203ENST00000467533 TAP2Q03519 686 aa9.42□□□□□ -0.9
HDAC3-203ENST00000467533 SF3B4Q15427 424 aaKnown RBP eCLIP9.42□□□□□ -0.92e-7■■■■■ 49
HDAC3-203ENST00000467533 CAPN13Q6MZZ7 669 aaPredicted RBP9.42□□□□□ -0.9
HDAC3-203ENST00000467533 DARS2Q6PI48 645 aaKnown RBP9.42□□□□□ -0.9
HDAC3-203ENST00000467533 PM20D2Q8IYS1 436 aa9.42□□□□□ -0.9
HDAC3-203ENST00000467533 ZNF441Q8N8Z8 693 aa9.42□□□□□ -0.9
HDAC3-203ENST00000467533 ZNF740Q8NDX6 193 aa9.42□□□□□ -0.9
HDAC3-203ENST00000467533 MBD3L2Q8NHZ7 208 aaPredicted RBP9.42□□□□□ -0.9
HDAC3-203ENST00000467533 SLC35G2Q8TBE7 412 aa9.42□□□□□ -0.9
HDAC3-203ENST00000467533 FAM136AQ96C01 138 aa9.42□□□□□ -0.9
HDAC3-203ENST00000467533 NTNG2Q96CW9 530 aa9.42□□□□□ -0.9
HDAC3-203ENST00000467533 SLC30A3Q99726 388 aa9.42□□□□□ -0.9
HDAC3-203ENST00000467533 HEMGNQ9BXL5 484 aa9.42□□□□□ -0.9
HDAC3-203ENST00000467533 LRTM1Q9HBL6 345 aa9.42□□□□□ -0.9
HDAC3-203ENST00000467533 CATSPERZQ9NTU4 200 aa9.42□□□□□ -0.9
HDAC3-203ENST00000467533 KLHL28Q9NXS3 571 aa9.42□□□□□ -0.9
HDAC3-203ENST00000467533 ZNF226Q9NYT6 803 aa9.42□□□□□ -0.9
HDAC3-203ENST00000467533 ZFATQ9P243 1243 aa9.42□□□□□ -0.9
HDAC3-203ENST00000467533 NENFQ9UMX5 172 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms