RNA–Protein interactions for RNA: ENST00000467272.6

UBR4-211, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-211ENST00000467272 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.33□□□□□ -0.6
UBR4-211ENST00000467272 CDC40O60508 579 aaKnown RBP eCLIP11.33□□□□□ -0.6
UBR4-211ENST00000467272 ZWINTO95229 277 aa11.33□□□□□ -0.6
UBR4-211ENST00000467272 TUBB4AP04350 444 aa11.33□□□□□ -0.6
UBR4-211ENST00000467272 C8GP07360 202 aa11.33□□□□□ -0.6
UBR4-211ENST00000467272 ZNF888P0CJ79 500 aaPredicted RBP11.33□□□□□ -0.6
UBR4-211ENST00000467272 AHRP35869 848 aa11.33□□□□□ -0.6
UBR4-211ENST00000467272 SLC1A2P43004 574 aa11.33□□□□□ -0.6
UBR4-211ENST00000467272 MAGEA3P43357 314 aa11.33□□□□□ -0.6
UBR4-211ENST00000467272 CCR8P51685 355 aa11.33□□□□□ -0.6
UBR4-211ENST00000467272 CLCN2P51788 898 aa11.33□□□□□ -0.6
UBR4-211ENST00000467272 GPR85P60893 370 aa11.33□□□□□ -0.6
UBR4-211ENST00000467272 PPIAP62937 165 aaKnown RBP11.33□□□□□ -0.6
UBR4-211ENST00000467272 BASP1P80723 227 aaKnown RBP11.33□□□□□ -0.6
UBR4-211ENST00000467272 SP140Q13342 867 aa11.33□□□□□ -0.6
UBR4-211ENST00000467272 NAE1Q13564 534 aa11.33□□□□□ -0.6
UBR4-211ENST00000467272 KCTD19Q17RG1 926 aaPredicted RBP11.33□□□□□ -0.6
UBR4-211ENST00000467272 ARSKQ6UWY0 536 aa11.33□□□□□ -0.6
UBR4-211ENST00000467272 RNF10Q8N5U6 811 aaKnown RBP11.33□□□□□ -0.6
UBR4-211ENST00000467272 ANKRD53Q8N9V6 530 aa11.33□□□□□ -0.6
UBR4-211ENST00000467272 MYRIPQ8NFW9 859 aa11.33□□□□□ -0.6
UBR4-211ENST00000467272 OR2M7Q8NG81 312 aa11.33□□□□□ -0.6
UBR4-211ENST00000467272 CREB3L4Q8TEY5 395 aa11.33□□□□□ -0.6
UBR4-211ENST00000467272 EEF1AKMT1Q8WVE0 214 aa11.33□□□□□ -0.6
UBR4-211ENST00000467272 AARSD1Q9BTE6 412 aaKnown RBP11.33□□□□□ -0.6
UBR4-211ENST00000467272 TTTY12Q9BZ98 90 aa11.33□□□□□ -0.6
UBR4-211ENST00000467272 TSGA10Q9BZW7 698 aa11.33□□□□□ -0.6
UBR4-211ENST00000467272 DEFB127Q9H1M4 99 aa11.33□□□□□ -0.6
UBR4-211ENST00000467272 ZKSCAN5Q9Y2L8 839 aa11.33□□□□□ -0.6
UBR4-211ENST00000467272 YARS2Q9Y2Z4 477 aaKnown RBP11.33□□□□□ -0.6
UBR4-211ENST00000467272 LIPGQ9Y5X9 500 aa11.33□□□□□ -0.6
UBR4-211ENST00000467272 TRBV11-1A0A0K0K1C0 115 aa11.32□□□□□ -0.6
UBR4-211ENST00000467272 MAGEB16A2A368 324 aa11.32□□□□□ -0.6
UBR4-211ENST00000467272 NPIPA2E9PIF3 369 aa11.32□□□□□ -0.6
UBR4-211ENST00000467272 NPIPA3F8WFD2 350 aa11.32□□□□□ -0.6
UBR4-211ENST00000467272 SYT5O00445 386 aa11.32□□□□□ -0.6
UBR4-211ENST00000467272 BCKDKO14874 412 aa11.32□□□□□ -0.6
UBR4-211ENST00000467272 OR1F1O43749 312 aa11.32□□□□□ -0.6
UBR4-211ENST00000467272 HAUS5O94927 633 aa11.32□□□□□ -0.6
UBR4-211ENST00000467272 IPO7O95373 1038 aaKnown RBP11.32□□□□□ -0.6
UBR4-211ENST00000467272 MLNP12872 115 aa11.32□□□□□ -0.6
UBR4-211ENST00000467272 RNH1P13489 461 aaKnown RBP11.32□□□□□ -0.6
UBR4-211ENST00000467272 GABRB3P28472 473 aa11.32□□□□□ -0.6
UBR4-211ENST00000467272 GRK3P35626 688 aa11.32□□□□□ -0.6
UBR4-211ENST00000467272 ZFP36L2P47974 494 aaKnown RBP11.32□□□□□ -0.6
UBR4-211ENST00000467272 KIF5AQ12840 1032 aa11.32□□□□□ -0.6
UBR4-211ENST00000467272 MYBPHQ13203 477 aa11.32□□□□□ -0.6
UBR4-211ENST00000467272 SLC25A35Q3KQZ1 300 aa11.32□□□□□ -0.6
UBR4-211ENST00000467272 CATSPEREQ5SY80 951 aa11.32□□□□□ -0.6
UBR4-211ENST00000467272 SEL1L2Q5TEA6 688 aa11.32□□□□□ -0.6
UBR4-211ENST00000467272 ANKRD22Q5VYY1 191 aa11.32□□□□□ -0.6
UBR4-211ENST00000467272 DUPD1Q68J44 220 aa11.32□□□□□ -0.6
UBR4-211ENST00000467272 LRRC8EQ6NSJ5 796 aa11.32□□□□□ -0.6
UBR4-211ENST00000467272 UGT3A1Q6NUS8 523 aa11.32□□□□□ -0.6
UBR4-211ENST00000467272 POMZP3Q6PJE2 187 aa11.32□□□□□ -0.6
UBR4-211ENST00000467272 C16orf47Q6ZP98 133 aaPredicted RBP11.32□□□□□ -0.6
UBR4-211ENST00000467272 TRILQ7L0X0 811 aa11.32□□□□□ -0.6
UBR4-211ENST00000467272 KRTAP1-3Q8IUG1 177 aa11.32□□□□□ -0.6
UBR4-211ENST00000467272 LMNTD2Q8IXW0 634 aa11.32□□□□□ -0.6
UBR4-211ENST00000467272 CYP4X1Q8N118 509 aa11.32□□□□□ -0.6
UBR4-211ENST00000467272 CA13Q8N1Q1 262 aa11.32□□□□□ -0.6
UBR4-211ENST00000467272 SNF8Q96H20 258 aa11.32□□□□□ -0.6
UBR4-211ENST00000467272 HAUS8Q9BT25 410 aa11.32□□□□□ -0.6
UBR4-211ENST00000467272 POLDIP3Q9BY77 421 aaKnown RBP11.32□□□□□ -0.6
UBR4-211ENST00000467272 TRIM5Q9C035 493 aa11.32□□□□□ -0.6
UBR4-211ENST00000467272 KLHL31Q9H511 634 aa11.32□□□□□ -0.6
UBR4-211ENST00000467272 TIMMDC1Q9NPL8 285 aa11.32□□□□□ -0.6
UBR4-211ENST00000467272 KCMF1Q9P0J7 381 aa11.32□□□□□ -0.6
UBR4-211ENST00000467272 MMACHCQ9Y4U1 282 aa11.32□□□□□ -0.6
UBR4-211ENST00000467272 TLN2Q9Y4G6 2542 aa11.32□□□□□ -0.6
UBR4-211ENST00000467272 AQP7O14520 342 aa11.31□□□□□ -0.6
UBR4-211ENST00000467272 SUSD5O60279 629 aa11.31□□□□□ -0.6
UBR4-211ENST00000467272 ZNF354AO60765 605 aaPredicted RBP11.31□□□□□ -0.6
UBR4-211ENST00000467272 OR2J2O76002 312 aa11.31□□□□□ -0.6
UBR4-211ENST00000467272 MYO1DO94832 1006 aa11.31□□□□□ -0.6
UBR4-211ENST00000467272 OR6B1O95007 311 aa11.31□□□□□ -0.6
UBR4-211ENST00000467272 TBX6O95947 436 aaPredicted RBP11.31□□□□□ -0.6
UBR4-211ENST00000467272 PAMP19021 973 aa11.31□□□□□ -0.6
UBR4-211ENST00000467272 ENDOUP21128 410 aaKnown RBP11.31□□□□□ -0.6
UBR4-211ENST00000467272 PPP2R1BP30154 601 aa11.31□□□□□ -0.6
UBR4-211ENST00000467272 SSR4P51571 173 aa11.31□□□□□ -0.6
UBR4-211ENST00000467272 PPP2R2AP63151 447 aa11.31□□□□□ -0.6
UBR4-211ENST00000467272 SKP1P63208 163 aa11.31□□□□□ -0.6
UBR4-211ENST00000467272 REEP5Q00765 189 aa11.31□□□□□ -0.6
UBR4-211ENST00000467272 DHX34Q14147 1143 aaKnown RBP11.31□□□□□ -0.6
UBR4-211ENST00000467272 DAZAP2Q15038 168 aaPredicted RBP11.31□□□□□ -0.6
UBR4-211ENST00000467272 CEBPEQ15744 281 aa11.31□□□□□ -0.6
UBR4-211ENST00000467272 BBS9Q3SYG4 887 aa11.31□□□□□ -0.6
UBR4-211ENST00000467272 FBXL19-AS1Q494R0 122 aa11.31□□□□□ -0.6
UBR4-211ENST00000467272 NDUFAF5Q5TEU4 345 aa11.31□□□□□ -0.6
UBR4-211ENST00000467272 PAOXQ6QHF9 649 aa11.31□□□□□ -0.6
UBR4-211ENST00000467272 ADGRD1Q6QNK2 874 aa11.31□□□□□ -0.6
UBR4-211ENST00000467272 B3GNT6Q6ZMB0 384 aa11.31□□□□□ -0.6
UBR4-211ENST00000467272 SEM1Q6ZVN7 128 aa11.31□□□□□ -0.6
UBR4-211ENST00000467272 ABHD13Q7L211 337 aa11.31□□□□□ -0.6
UBR4-211ENST00000467272 CAMKMTQ7Z624 323 aa11.31□□□□□ -0.6
UBR4-211ENST00000467272 CDC20BQ86Y33 519 aa11.31□□□□□ -0.6
UBR4-211ENST00000467272 TMEM156Q8N614 296 aa11.31□□□□□ -0.6
UBR4-211ENST00000467272 TMEM251Q8N6I4 163 aa11.31□□□□□ -0.6
UBR4-211ENST00000467272 TMEM52Q8NDY8 209 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms