RNA–Protein interactions for RNA: ENST00000466601.5

DNMT3A-208, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 2

Gene DNMT3A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-208ENST00000466601 VSTM2BA6NLU5 285 aa13.68□□□□□ -0.22
DNMT3A-208ENST00000466601 ZNF891A8MT65 544 aaPredicted RBP13.68□□□□□ -0.22
DNMT3A-208ENST00000466601 K7ENP7 123 aa13.68□□□□□ -0.22
DNMT3A-208ENST00000466601 SAP18O00422 153 aaKnown RBP13.68□□□□□ -0.22
DNMT3A-208ENST00000466601 DNAJB6O75190 326 aa13.68□□□□□ -0.22
DNMT3A-208ENST00000466601 ULK1O75385 1050 aa13.68□□□□□ -0.22
DNMT3A-208ENST00000466601 CRCPO75575 148 aa13.68□□□□□ -0.22
DNMT3A-208ENST00000466601 KLF7O75840 302 aaPredicted RBP13.68□□□□□ -0.22
DNMT3A-208ENST00000466601 ETHE1O95571 254 aa13.68□□□□□ -0.22
DNMT3A-208ENST00000466601 SERPINE1P05121 402 aa13.68□□□□□ -0.22
DNMT3A-208ENST00000466601 CHRNGP07510 517 aa13.68□□□□□ -0.22
DNMT3A-208ENST00000466601 ZGLP1P0C6A0 271 aa13.68□□□□□ -0.22
DNMT3A-208ENST00000466601 FOLR3P41439 243 aa13.68□□□□□ -0.22
DNMT3A-208ENST00000466601 RAP1GDS1P52306 607 aa13.68□□□□□ -0.22
DNMT3A-208ENST00000466601 FOXA1P55317 472 aa13.68□□□□□ -0.22
DNMT3A-208ENST00000466601 FOXL2P58012 376 aa13.68□□□□□ -0.22
DNMT3A-208ENST00000466601 OLR1P78380 273 aa13.68□□□□□ -0.22
DNMT3A-208ENST00000466601 MC1RQ01726 317 aa13.68□□□□□ -0.22
DNMT3A-208ENST00000466601 VAC14Q08AM6 782 aa13.68□□□□□ -0.22
DNMT3A-208ENST00000466601 GALNT1Q10472 559 aaPredicted RBP13.68□□□□□ -0.22
DNMT3A-208ENST00000466601 CUL3Q13618 768 aa13.68□□□□□ -0.22
DNMT3A-208ENST00000466601 CHI3L2Q15782 390 aa13.68□□□□□ -0.22
DNMT3A-208ENST00000466601 VWA2Q5GFL6 755 aa13.68□□□□□ -0.22
DNMT3A-208ENST00000466601 ARL13AQ5H913 290 aaPredicted RBP13.68□□□□□ -0.22
DNMT3A-208ENST00000466601 TCHHL1Q5QJ38 904 aaPredicted RBP13.68□□□□□ -0.22
DNMT3A-208ENST00000466601 FAM69BQ5VUD6 431 aa13.68□□□□□ -0.22
DNMT3A-208ENST00000466601 INO80CQ6PI98 192 aaPredicted RBP13.68□□□□□ -0.22
DNMT3A-208ENST00000466601 CUZD1Q86UP6 607 aa13.68□□□□□ -0.22
DNMT3A-208ENST00000466601 OR5T3Q8NGG3 340 aa13.68□□□□□ -0.22
DNMT3A-208ENST00000466601 OR51Q1Q8NH59 317 aa13.68□□□□□ -0.22
DNMT3A-208ENST00000466601 RGMAQ96B86 450 aa13.68□□□□□ -0.22
DNMT3A-208ENST00000466601 MIEF2Q96C03 454 aa13.68□□□□□ -0.22
DNMT3A-208ENST00000466601 KCNC2Q96PR1 638 aa13.68□□□□□ -0.22
DNMT3A-208ENST00000466601 TBCDQ9BTW9 1192 aa13.68□□□□□ -0.22
DNMT3A-208ENST00000466601 ROGDIQ9GZN7 287 aa13.68□□□□□ -0.22
DNMT3A-208ENST00000466601 SOX17Q9H6I2 414 aaPredicted RBP13.68□□□□□ -0.22
DNMT3A-208ENST00000466601 WDR54Q9H977 334 aa13.68□□□□□ -0.22
DNMT3A-208ENST00000466601 COPS7BQ9H9Q2 264 aaPredicted RBP13.68□□□□□ -0.22
DNMT3A-208ENST00000466601 EML4Q9HC35 981 aaKnown RBP13.68□□□□□ -0.22
DNMT3A-208ENST00000466601 CPNE5Q9HCH3 593 aa13.68□□□□□ -0.22
DNMT3A-208ENST00000466601 TNFRSF12AQ9NP84 129 aa13.68□□□□□ -0.22
DNMT3A-208ENST00000466601 PRDM7Q9NQW5 492 aa13.68□□□□□ -0.22
DNMT3A-208ENST00000466601 IGF2RP11717 2491 aa13.68□□□□□ -0.22
DNMT3A-208ENST00000466601 CHD8Q9HCK8 2581 aa13.67□□□□□ -0.22
DNMT3A-208ENST00000466601 RTCAO00442 366 aaKnown RBP13.67□□□□□ -0.22
DNMT3A-208ENST00000466601 NKX2-8O15522 239 aa13.67□□□□□ -0.22
DNMT3A-208ENST00000466601 CHST10O43529 356 aa13.67□□□□□ -0.22
DNMT3A-208ENST00000466601 B3GALT2O43825 422 aa13.67□□□□□ -0.22
DNMT3A-208ENST00000466601 RECKO95980 971 aa13.67□□□□□ -0.22
DNMT3A-208ENST00000466601 BGNP21810 368 aa13.67□□□□□ -0.22
DNMT3A-208ENST00000466601 HTR6P50406 440 aa13.67□□□□□ -0.22
DNMT3A-208ENST00000466601 ARFIP1P53367 373 aa13.67□□□□□ -0.22
DNMT3A-208ENST00000466601 MTTPP55157 894 aa13.67□□□□□ -0.22
DNMT3A-208ENST00000466601 ZNF33BQ06732 778 aa13.67□□□□□ -0.22
DNMT3A-208ENST00000466601 RUNX2Q13950 521 aa13.67□□□□□ -0.22
DNMT3A-208ENST00000466601 ERV3-1Q14264 604 aa13.67□□□□□ -0.22
DNMT3A-208ENST00000466601 AP5B1Q2VPB7 878 aa13.67□□□□□ -0.22
DNMT3A-208ENST00000466601 OR4C11Q6IEV9 310 aa13.67□□□□□ -0.22
DNMT3A-208ENST00000466601 SHISA6Q6ZSJ9 500 aa13.67□□□□□ -0.22
DNMT3A-208ENST00000466601 ZC3H7AQ8IWR0 971 aaKnown RBP13.67□□□□□ -0.22
DNMT3A-208ENST00000466601 PRSS58Q8IYP2 241 aa13.67□□□□□ -0.22
DNMT3A-208ENST00000466601 SHISA5Q8N114 240 aa13.67□□□□□ -0.22
DNMT3A-208ENST00000466601 OR2Y1Q8NGV0 311 aa13.67□□□□□ -0.22
DNMT3A-208ENST00000466601 PEX11GQ96HA9 241 aa13.67□□□□□ -0.22
DNMT3A-208ENST00000466601 SERINC2Q96SA4 455 aa13.67□□□□□ -0.22
DNMT3A-208ENST00000466601 HBEGFQ99075 208 aa13.67□□□□□ -0.22
DNMT3A-208ENST00000466601 SPSB2Q99619 263 aa13.67□□□□□ -0.22
DNMT3A-208ENST00000466601 NPLQ9BXD5 320 aaPredicted RBP13.67□□□□□ -0.22
DNMT3A-208ENST00000466601 TGIF2Q9GZN2 237 aa13.67□□□□□ -0.22
DNMT3A-208ENST00000466601 BRF2Q9HAW0 419 aa13.67□□□□□ -0.22
DNMT3A-208ENST00000466601 C14orf105Q9NVL8 296 aa13.67□□□□□ -0.22
DNMT3A-208ENST00000466601 TPRP12270 2363 aaKnown RBP13.66□□□□□ -0.22
DNMT3A-208ENST00000466601 TMEM114B3SHH9 223 aa13.66□□□□□ -0.22
DNMT3A-208ENST00000466601 PLPP1O14494 284 aa13.66□□□□□ -0.22
DNMT3A-208ENST00000466601 AZIN1O14977 448 aa13.66□□□□□ -0.22
DNMT3A-208ENST00000466601 BMP10O95393 424 aa13.66□□□□□ -0.22
DNMT3A-208ENST00000466601 PRKAR1AP10644 381 aa13.66□□□□□ -0.22
DNMT3A-208ENST00000466601 UROSP10746 265 aa13.66□□□□□ -0.22
DNMT3A-208ENST00000466601 HSD3B1P14060 373 aa13.66□□□□□ -0.22
DNMT3A-208ENST00000466601 IL10P22301 178 aa13.66□□□□□ -0.22
DNMT3A-208ENST00000466601 GRK2P25098 689 aa13.66□□□□□ -0.22
DNMT3A-208ENST00000466601 ATP5A1P25705 553 aaKnown RBP13.66□□□□□ -0.22
DNMT3A-208ENST00000466601 HSD3B2P26439 372 aa13.66□□□□□ -0.22
DNMT3A-208ENST00000466601 SERPINB3P29508 390 aa13.66□□□□□ -0.22
DNMT3A-208ENST00000466601 ARRB2P32121 409 aa13.66□□□□□ -0.22
DNMT3A-208ENST00000466601 SSR2P43308 183 aa13.66□□□□□ -0.22
DNMT3A-208ENST00000466601 TSFMP43897 325 aaKnown RBP13.66□□□□□ -0.22
DNMT3A-208ENST00000466601 XCR1P46094 333 aa13.66□□□□□ -0.22
DNMT3A-208ENST00000466601 CXADRP78310 365 aa13.66□□□□□ -0.22
DNMT3A-208ENST00000466601 KLC1Q07866 573 aa13.66□□□□□ -0.22
DNMT3A-208ENST00000466601 CSTF3Q12996 717 aaKnown RBP13.66□□□□□ -0.22
DNMT3A-208ENST00000466601 SSPNQ14714 243 aa13.66□□□□□ -0.22
DNMT3A-208ENST00000466601 ABRAXAS2Q15018 415 aa13.66□□□□□ -0.22
DNMT3A-208ENST00000466601 CRTC2Q53ET0 693 aaPredicted RBP13.66□□□□□ -0.22
DNMT3A-208ENST00000466601 CES4AQ5XG92 561 aa13.66□□□□□ -0.22
DNMT3A-208ENST00000466601 CLEC6AQ6EIG7 209 aa13.66□□□□□ -0.22
DNMT3A-208ENST00000466601 SCIMPQ6UWF3 145 aa13.66□□□□□ -0.22
DNMT3A-208ENST00000466601 ZNF793Q6ZN11 406 aa13.66□□□□□ -0.22
DNMT3A-208ENST00000466601 ATG14Q6ZNE5 492 aa13.66□□□□□ -0.22
DNMT3A-208ENST00000466601 LAPTM4BQ86VI4 370 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms