RNA–Protein interactions for RNA: ENST00000466448.4

SRSF4-202, Transcript of serine and arginine rich splicing factor 4, humanhuman

APPRIS ALT2 TSL 3

Gene SRSF4, Length 1,264 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-202ENST00000466448 ZNF223Q9UK11 482 aaPredicted RBP17.56■□□□□ 0.4
SRSF4-202ENST00000466448 IKZF3Q9UKT9 509 aa17.56■□□□□ 0.4
SRSF4-202ENST00000466448 ZFHX3Q15911 3703 aa17.56■□□□□ 0.4
SRSF4-202ENST00000466448 NKX2-6A6NCS4 301 aa17.55■□□□□ 0.4
SRSF4-202ENST00000466448 URADA6NGE7 173 aa17.55■□□□□ 0.4
SRSF4-202ENST00000466448 MYO1DO94832 1006 aa17.55■□□□□ 0.4
SRSF4-202ENST00000466448 TTC4O95801 387 aa17.55■□□□□ 0.4
SRSF4-202ENST00000466448 NR0B1P51843 470 aaKnown RBP17.55■□□□□ 0.4
SRSF4-202ENST00000466448 TERF2Q15554 542 aa17.55■□□□□ 0.4
SRSF4-202ENST00000466448 PPP1R3AQ16821 1122 aa17.55■□□□□ 0.4
SRSF4-202ENST00000466448 SPANXN3Q5MJ09 141 aa17.55■□□□□ 0.4
SRSF4-202ENST00000466448 HECTD2Q5U5R9 776 aa17.55■□□□□ 0.4
SRSF4-202ENST00000466448 SBSNQ6UWP8 590 aa17.55■□□□□ 0.4
SRSF4-202ENST00000466448 TMPRSS11BQ86T26 416 aa17.55■□□□□ 0.4
SRSF4-202ENST00000466448 RPRMLQ8N4K4 120 aa17.55■□□□□ 0.4
SRSF4-202ENST00000466448 TMEM156Q8N614 296 aa17.55■□□□□ 0.4
SRSF4-202ENST00000466448 GPATCH11Q8N954 259 aa17.55■□□□□ 0.4
SRSF4-202ENST00000466448 OR52N2Q8NGI0 321 aa17.55■□□□□ 0.4
SRSF4-202ENST00000466448 CREB3L4Q8TEY5 395 aa17.55■□□□□ 0.4
SRSF4-202ENST00000466448 PDLIM2Q96JY6 352 aa17.55■□□□□ 0.4
SRSF4-202ENST00000466448 PLSCR2Q9NRY7 297 aa17.55■□□□□ 0.4
SRSF4-202ENST00000466448 FBXW2Q9UKT8 454 aa17.55■□□□□ 0.4
SRSF4-202ENST00000466448 RNF6Q9Y252 685 aa17.55■□□□□ 0.4
SRSF4-202ENST00000466448 DYRK1BQ9Y463 629 aa17.55■□□□□ 0.4
SRSF4-202ENST00000466448 CACNA1CQ13936 2221 aa17.54■□□□□ 0.4
SRSF4-202ENST00000466448 FAM90A27PA6NNH2 459 aa17.54■□□□□ 0.4
SRSF4-202ENST00000466448 PDE9AO76083 593 aa17.54■□□□□ 0.4
SRSF4-202ENST00000466448 CHRNB4P30926 498 aa17.54■□□□□ 0.4
SRSF4-202ENST00000466448 TFF3Q07654 80 aa17.54■□□□□ 0.4
SRSF4-202ENST00000466448 RBBP5Q15291 538 aaKnown RBP17.54■□□□□ 0.4
SRSF4-202ENST00000466448 MSS51Q4VC12 460 aa17.54■□□□□ 0.4
SRSF4-202ENST00000466448 EMC4Q5J8M3 183 aa17.54■□□□□ 0.4
SRSF4-202ENST00000466448 TOR1AIP1Q5JTV8 583 aa17.54■□□□□ 0.4
SRSF4-202ENST00000466448 ARHGAP11AQ6P4F7 1023 aa17.54■□□□□ 0.4
SRSF4-202ENST00000466448 NXPE4Q6UWF7 544 aa17.54■□□□□ 0.4
SRSF4-202ENST00000466448 GALNT7Q86SF2 657 aa17.54■□□□□ 0.4
SRSF4-202ENST00000466448 THOC6Q86W42 341 aaKnown RBP17.54■□□□□ 0.4
SRSF4-202ENST00000466448 IGDCC3Q8IVU1 814 aa17.54■□□□□ 0.4
SRSF4-202ENST00000466448 ASB5Q8WWX0 329 aa17.54■□□□□ 0.4
SRSF4-202ENST00000466448 CERS2Q96G23 380 aa17.54■□□□□ 0.4
SRSF4-202ENST00000466448 AIF1LQ9BQI0 150 aa17.54■□□□□ 0.4
SRSF4-202ENST00000466448 UCK2Q9BZX2 261 aa17.54■□□□□ 0.4
SRSF4-202ENST00000466448 TP63Q9H3D4 680 aaPredicted RBP17.54■□□□□ 0.4
SRSF4-202ENST00000466448 PLAC1Q9HBJ0 212 aa17.54■□□□□ 0.4
SRSF4-202ENST00000466448 DEPPQ9NTK1 212 aa17.54■□□□□ 0.4
SRSF4-202ENST00000466448 PPIEQ9UNP9 301 aaKnown RBP17.54■□□□□ 0.4
SRSF4-202ENST00000466448 SLC22A14Q9Y267 594 aa17.54■□□□□ 0.4
SRSF4-202ENST00000466448 MMACHCQ9Y4U1 282 aa17.54■□□□□ 0.4
SRSF4-202ENST00000466448 CLDN16Q9Y5I7 305 aa17.54■□□□□ 0.4
SRSF4-202ENST00000466448 MTORP42345 2549 aa17.53■□□□□ 0.4
SRSF4-202ENST00000466448 TGFBR3LH3BV60 316 aa17.53■□□□□ 0.4
SRSF4-202ENST00000466448 NRDCO43847 1150 aa17.53■□□□□ 0.4
SRSF4-202ENST00000466448 PRKNO60260 465 aaPredicted RBP17.53■□□□□ 0.4
SRSF4-202ENST00000466448 TOXO94900 526 aa17.53■□□□□ 0.4
SRSF4-202ENST00000466448 SERPINA6P08185 405 aa17.53■□□□□ 0.4
SRSF4-202ENST00000466448 PPP2R1BP30154 601 aa17.53■□□□□ 0.4
SRSF4-202ENST00000466448 GPR143P51810 404 aa17.53■□□□□ 0.4
SRSF4-202ENST00000466448 BTN3A2P78410 334 aa17.53■□□□□ 0.4
SRSF4-202ENST00000466448 TEDDM1Q5T9Z0 273 aa17.53■□□□□ 0.4
SRSF4-202ENST00000466448 TMEM211Q6ICI0 200 aa17.53■□□□□ 0.4
SRSF4-202ENST00000466448 SCUBE1Q8IWY4 988 aa17.53■□□□□ 0.4
SRSF4-202ENST00000466448 LILRB4Q8NHJ6 448 aa17.53■□□□□ 0.4
SRSF4-202ENST00000466448 NCLNQ969V3 563 aa17.53■□□□□ 0.4
SRSF4-202ENST00000466448 VMP1Q96GC9 406 aa17.53■□□□□ 0.4
SRSF4-202ENST00000466448 PBKQ96KB5 322 aa17.53■□□□□ 0.4
SRSF4-202ENST00000466448 TIMMDC1Q9NPL8 285 aa17.53■□□□□ 0.4
SRSF4-202ENST00000466448 PPANQ9NQ55 473 aaKnown RBP17.53■□□□□ 0.4
SRSF4-202ENST00000466448 PNO1Q9NRX1 252 aaKnown RBP17.53■□□□□ 0.4
SRSF4-202ENST00000466448 KCMF1Q9P0J7 381 aa17.53■□□□□ 0.4
SRSF4-202ENST00000466448 VWA7Q9Y334 891 aa17.53■□□□□ 0.4
SRSF4-202ENST00000466448 USP27XA6NNY8 438 aa17.52■□□□□ 0.4
SRSF4-202ENST00000466448 PGRMC1O00264 195 aaKnown RBP17.52■□□□□ 0.4
SRSF4-202ENST00000466448 TUBB4AP04350 444 aa17.52■□□□□ 0.4
SRSF4-202ENST00000466448 MSX1P28360 303 aa17.52■□□□□ 0.4
SRSF4-202ENST00000466448 SSR4P51571 173 aa17.52■□□□□ 0.4
SRSF4-202ENST00000466448 RUNX2Q13950 521 aa17.52■□□□□ 0.4
SRSF4-202ENST00000466448 FAM45BPQ6NSW5 357 aa17.52■□□□□ 0.4
SRSF4-202ENST00000466448 C16orf47Q6ZP98 133 aaPredicted RBP17.52■□□□□ 0.4
SRSF4-202ENST00000466448 CCDC71Q8IV32 467 aaPredicted RBP17.52■□□□□ 0.4
SRSF4-202ENST00000466448 PSD4Q8NDX1 1056 aa17.52■□□□□ 0.4
SRSF4-202ENST00000466448 TMEM52Q8NDY8 209 aa17.52■□□□□ 0.4
SRSF4-202ENST00000466448 FAM45AQ8TCE6 357 aa17.52■□□□□ 0.4
SRSF4-202ENST00000466448 GRK7Q8WTQ7 553 aa17.52■□□□□ 0.4
SRSF4-202ENST00000466448 RND1Q92730 232 aa17.52■□□□□ 0.4
SRSF4-202ENST00000466448 PDLIM5Q96HC4 596 aaKnown RBP17.52■□□□□ 0.4
SRSF4-202ENST00000466448 NAP1L3Q99457 506 aaPredicted RBP17.52■□□□□ 0.4
SRSF4-202ENST00000466448 NAT9Q9BTE0 207 aa17.52■□□□□ 0.4
SRSF4-202ENST00000466448 DEFB127Q9H1M4 99 aa17.52■□□□□ 0.4
SRSF4-202ENST00000466448 TNFRSF10DQ9UBN6 386 aa17.52■□□□□ 0.4
SRSF4-202ENST00000466448 KCNE2Q9Y6J6 123 aa17.52■□□□□ 0.4
SRSF4-202ENST00000466448 A0A0G2JN53 185 aa17.51■□□□□ 0.39
SRSF4-202ENST00000466448 PINLYPA6NC86 204 aa17.51■□□□□ 0.39
SRSF4-202ENST00000466448 TMEM200CA6NKL6 621 aa17.51■□□□□ 0.39
SRSF4-202ENST00000466448 CDC7O00311 574 aa17.51■□□□□ 0.39
SRSF4-202ENST00000466448 OR2J2O76002 312 aa17.51■□□□□ 0.39
SRSF4-202ENST00000466448 FNTAP49354 379 aa17.51■□□□□ 0.39
SRSF4-202ENST00000466448 HNRNPFP52597 415 aaKnown RBP17.51■□□□□ 0.39
SRSF4-202ENST00000466448 HSD17B7P56937 341 aa17.51■□□□□ 0.39
SRSF4-202ENST00000466448 DMRTC2Q8IXT2 367 aaPredicted RBP17.51■□□□□ 0.39
SRSF4-202ENST00000466448 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.51■□□□□ 0.396e-6■■■■■ 27.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms