RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.57□□□□□ -1.84
LRCH3-211ENST00000466054 SOCS3O14543 225 aa3.57□□□□□ -1.84
LRCH3-211ENST00000466054 TRAFD1O14545 582 aaPredicted RBP3.57□□□□□ -1.84
LRCH3-211ENST00000466054 ZNF263O14978 683 aa3.57□□□□□ -1.84
LRCH3-211ENST00000466054 TLX2O43763 284 aaPredicted RBP3.57□□□□□ -1.84
LRCH3-211ENST00000466054 IDH3BO43837 385 aa3.57□□□□□ -1.84
LRCH3-211ENST00000466054 ATP9AO75110 1047 aa3.57□□□□□ -1.84
LRCH3-211ENST00000466054 GLCEO94923 617 aa3.57□□□□□ -1.84
LRCH3-211ENST00000466054 LETM1O95202 739 aaPredicted RBP3.57□□□□□ -1.84
LRCH3-211ENST00000466054 FEN1P39748 380 aaKnown RBP3.57□□□□□ -1.84
LRCH3-211ENST00000466054 NEDD4P46934 1319 aa3.57□□□□□ -1.84
LRCH3-211ENST00000466054 CLCN4P51793 760 aa3.57□□□□□ -1.84
LRCH3-211ENST00000466054 SLC3A1Q07837 685 aa3.57□□□□□ -1.84
LRCH3-211ENST00000466054 ELAVL2Q12926 359 aaKnown RBP3.57□□□□□ -1.84
LRCH3-211ENST00000466054 ZNF177Q13360 481 aaPredicted RBP3.57□□□□□ -1.84
LRCH3-211ENST00000466054 MAPK11Q15759 364 aa3.57□□□□□ -1.84
LRCH3-211ENST00000466054 LRRC37A5PQ49AS3 106 aa3.57□□□□□ -1.84
LRCH3-211ENST00000466054 TAF1BQ53T94 588 aaPredicted RBP3.57□□□□□ -1.84
LRCH3-211ENST00000466054 GLRA4Q5JXX5 417 aa3.57□□□□□ -1.84
LRCH3-211ENST00000466054 LCE3EQ5T5B0 92 aa3.57□□□□□ -1.84
LRCH3-211ENST00000466054 GTSCR1Q86UQ5 136 aa3.57□□□□□ -1.84
LRCH3-211ENST00000466054 ZC3H3Q8IXZ2 948 aaKnown RBP3.57□□□□□ -1.84
LRCH3-211ENST00000466054 ZNF444Q8N0Y2 327 aaPredicted RBP3.57□□□□□ -1.84
LRCH3-211ENST00000466054 OR5M9Q8NGP3 310 aa3.57□□□□□ -1.84
LRCH3-211ENST00000466054 RPLP0P6Q8NHW5 317 aa3.57□□□□□ -1.84
LRCH3-211ENST00000466054 CNRIP1Q96F85 164 aaPredicted RBP3.57□□□□□ -1.84
LRCH3-211ENST00000466054 CDKN2AIPNLQ96HQ2 116 aa3.57□□□□□ -1.84
LRCH3-211ENST00000466054 PRICKLE1Q96MT3 831 aaPredicted RBP3.57□□□□□ -1.84
LRCH3-211ENST00000466054 GPATCH1Q9BRR8 931 aaKnown RBP3.57□□□□□ -1.84
LRCH3-211ENST00000466054 TRIM7Q9C029 511 aa3.57□□□□□ -1.84
LRCH3-211ENST00000466054 FNDC4Q9H6D8 234 aaPredicted RBP3.57□□□□□ -1.84
LRCH3-211ENST00000466054 VIPAS39Q9H9C1 493 aa3.57□□□□□ -1.84
LRCH3-211ENST00000466054 IL1RAPL2Q9NP60 686 aa3.57□□□□□ -1.84
LRCH3-211ENST00000466054 NLGN3Q9NZ94 848 aa3.57□□□□□ -1.84
LRCH3-211ENST00000466054 KLK11Q9UBX7 282 aa3.57□□□□□ -1.84
LRCH3-211ENST00000466054 ZNF732B4DXR9 585 aa3.56□□□□□ -1.84
LRCH3-211ENST00000466054 M0R296 226 aa3.56□□□□□ -1.84
LRCH3-211ENST00000466054 RTCAO00442 366 aaKnown RBP3.56□□□□□ -1.84
LRCH3-211ENST00000466054 ECE2O60344 883 aa3.56□□□□□ -1.84
LRCH3-211ENST00000466054 CRCPO75575 148 aa3.56□□□□□ -1.84
LRCH3-211ENST00000466054 NXPH4O95158 308 aa3.56□□□□□ -1.84
LRCH3-211ENST00000466054 FKBP1BP68106 108 aa3.56□□□□□ -1.84
LRCH3-211ENST00000466054 SLC34A1Q06495 639 aa3.56□□□□□ -1.84
LRCH3-211ENST00000466054 CNTN1Q12860 1018 aa3.56□□□□□ -1.84
LRCH3-211ENST00000466054 LY6DQ14210 128 aa3.56□□□□□ -1.84
LRCH3-211ENST00000466054 MORF4L2Q15014 288 aa3.56□□□□□ -1.84
LRCH3-211ENST00000466054 FAM189A2Q15884 450 aa3.56□□□□□ -1.84
LRCH3-211ENST00000466054 ACKR1Q16570 336 aa3.56□□□□□ -1.84
LRCH3-211ENST00000466054 PLPP4Q5VZY2 271 aa3.56□□□□□ -1.84
LRCH3-211ENST00000466054 ZNF776Q68DI1 518 aaPredicted RBP3.56□□□□□ -1.84
LRCH3-211ENST00000466054 DOK6Q6PKX4 331 aa3.56□□□□□ -1.84
LRCH3-211ENST00000466054 GDPGP1Q6ZNW5 385 aa3.56□□□□□ -1.84
LRCH3-211ENST00000466054 Q6ZVQ6 151 aa3.56□□□□□ -1.84
LRCH3-211ENST00000466054 AQP12AQ8IXF9 295 aa3.56□□□□□ -1.84
LRCH3-211ENST00000466054 DND1Q8IYX4 353 aaKnown RBP3.56□□□□□ -1.84
LRCH3-211ENST00000466054 MAPK1IP1LQ8NDC0 245 aa3.56□□□□□ -1.84
LRCH3-211ENST00000466054 C18orf12Q96KH6 178 aa3.56□□□□□ -1.84
LRCH3-211ENST00000466054 IWS1Q96ST2 819 aa3.56□□□□□ -1.84
LRCH3-211ENST00000466054 PKP2Q99959 881 aa3.56□□□□□ -1.84
LRCH3-211ENST00000466054 CCM2Q9BSQ5 444 aa3.56□□□□□ -1.84
LRCH3-211ENST00000466054 UBXN6Q9BZV1 441 aa3.56□□□□□ -1.84
LRCH3-211ENST00000466054 PARLQ9H300 379 aa3.56□□□□□ -1.84
LRCH3-211ENST00000466054 CUEDC2Q9H467 287 aa3.56□□□□□ -1.84
LRCH3-211ENST00000466054 NUDT4Q9NZJ9 180 aa3.56□□□□□ -1.84
LRCH3-211ENST00000466054 CNIH4Q9P003 139 aa3.56□□□□□ -1.84
LRCH3-211ENST00000466054 ZHX2Q9Y6X8 837 aa3.56□□□□□ -1.84
LRCH3-211ENST00000466054 ACEP12821 1306 aa3.55□□□□□ -1.84
LRCH3-211ENST00000466054 A0A087X0K7 114 aa3.55□□□□□ -1.84
LRCH3-211ENST00000466054 IGHV3-20A0A0C4DH32 117 aa3.55□□□□□ -1.84
LRCH3-211ENST00000466054 MAGEB16A2A368 324 aa3.55□□□□□ -1.84
LRCH3-211ENST00000466054 KRTAP16-1A8MUX0 517 aa3.55□□□□□ -1.84
LRCH3-211ENST00000466054 TTI1O43156 1089 aa3.55□□□□□ -1.84
LRCH3-211ENST00000466054 MLNRO43193 412 aa3.55□□□□□ -1.84
LRCH3-211ENST00000466054 TNFSF12O43508 249 aa3.55□□□□□ -1.84
LRCH3-211ENST00000466054 RPLP0P05388 317 aaKnown RBP3.55□□□□□ -1.84
LRCH3-211ENST00000466054 PKLRP30613 574 aa3.55□□□□□ -1.84
LRCH3-211ENST00000466054 KHKP50053 298 aa3.55□□□□□ -1.84
LRCH3-211ENST00000466054 NDST2P52849 883 aa3.55□□□□□ -1.84
LRCH3-211ENST00000466054 IRX6P78412 446 aaPredicted RBP3.55□□□□□ -1.84
LRCH3-211ENST00000466054 GPR50Q13585 617 aa3.55□□□□□ -1.84
LRCH3-211ENST00000466054 CEACAM7Q14002 265 aa3.55□□□□□ -1.84
LRCH3-211ENST00000466054 SMU1Q2TAY7 513 aa3.55□□□□□ -1.84
LRCH3-211ENST00000466054 C1QTNF12Q5T7M4 302 aa3.55□□□□□ -1.84
LRCH3-211ENST00000466054 IYDQ6PHW0 289 aa3.55□□□□□ -1.84
LRCH3-211ENST00000466054 RFPL4BQ6ZWI9 263 aa3.55□□□□□ -1.84
LRCH3-211ENST00000466054 IQCA1Q86XH1 822 aa3.55□□□□□ -1.84
LRCH3-211ENST00000466054 NUP93Q8N1F7 819 aa3.55□□□□□ -1.84
LRCH3-211ENST00000466054 Q8NBF4 154 aa3.55□□□□□ -1.84
LRCH3-211ENST00000466054 AQP11Q8NBQ7 271 aa3.55□□□□□ -1.84
LRCH3-211ENST00000466054 OR9Q2Q8NGE9 314 aa3.55□□□□□ -1.84
LRCH3-211ENST00000466054 OR13C5Q8NGS8 318 aa3.55□□□□□ -1.84
LRCH3-211ENST00000466054 C11orf45Q8TAV5 145 aa3.55□□□□□ -1.84
LRCH3-211ENST00000466054 CD99L2Q8TCZ2 262 aa3.55□□□□□ -1.84
LRCH3-211ENST00000466054 SAP25Q8TEE9 199 aa3.55□□□□□ -1.84
LRCH3-211ENST00000466054 LRRC15Q8TF66 581 aa3.55□□□□□ -1.84
LRCH3-211ENST00000466054 SEPT8Q92599 483 aa3.55□□□□□ -1.84
LRCH3-211ENST00000466054 ATXN7L3BQ96GX2 97 aa3.55□□□□□ -1.84
LRCH3-211ENST00000466054 DESI2Q9BSY9 194 aa3.55□□□□□ -1.84
LRCH3-211ENST00000466054 CABLES2Q9BTV7 478 aa3.55□□□□□ -1.84
LRCH3-211ENST00000466054 SLC39A8Q9C0K1 460 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms